Klipp, Edda

Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis

Nicolas, P., Mäder, U., Dervyn, E., Rochat, T., Leduc, A., Pigeonneau, N., Bidnenko, E., Marchadier, E., Hoebeke, M., Aymerich, S., et al. (2012) · Science

Bacterial Genetics and BiotechnologyGene Regulatory Network Analysis

Cited by 910

Minimum information requested in the annotation of biochemical models (MIRIAM)

Novère, N. L., Finney, A., Hucka, M., Bhalla, U. S., Campagne, F., Collado-Vides, J., Crampin, E. J., Halstead, M., Klipp, E., Mendes, P., et al. (2005) · Nature Biotechnology

Gene Regulatory Network AnalysisScientific Computing and Data Management

Cited by 622

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

Herrgård, M. J., Swainston, N., Dobson, P., Dunn, W. B., Arga, K. Y., Arvas, M., Blüthgen, N., Borger, S., Costenoble, R., Heinemann, M., et al. (2008) · Nature Biotechnology

Microbial Metabolic Engineering and BioproductionBioinformatics and Genomic Networks

Cited by 588

MEMOTE for standardized genome-scale metabolic model testing

Lieven, C., Beber, M. E., Olivier, B. G., Bergmann, F. T., Ataman, M., Babaei, P., Bartell, J. A., Blank, L. M., Chauhan, S., Correia, K., et al. (2020) · Nature Biotechnology

Microbial Metabolic Engineering and BioproductionGene Regulatory Network Analysis

Cited by 509

Triple‐negative breast cancer: Present challenges and new perspectives

Podo, F., Buydens, L. M. C., Degani, H., Hilhorst, R., Klipp, E., Gribbestad, I. S., Van Huffel, S., W.M. van Laarhoven, H., Luts, J., Monleon, D., et al. (2010) · Molecular Oncology

Breast Cancer Treatment StudiesBreast Lesions and Carcinomas

Cited by 299

Loss of hepatic Mboat7 leads to liver fibrosis

Thangapandi, V. R., Knittelfelder, O., Brosch, M., Patsenker, E., Vvedenskaya, O., Buch, S., Hinz, S., Hendricks, A., Nati, M., Herrmann, A., et al. (2021) · Gut

Liver Disease Diagnosis and TreatmentLiver physiology and pathology

Cited by 125

Fungal Hsp90: a biological transistor that tunes cellular outputs to thermal inputs

Leach, M. D., Klipp, E., Cowen, L. E., & Brown, A. J. P. (2012) · Nature Reviews Microbiology

Heat shock proteins researchFungal and yeast genetics research

Cited by 107

Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling

Wodke, J. A. H., Puchałka, J., Lluch‐Senar, M., Marcos, J., Yus, E., Godinho, M., Gutiérrez‐Gallego, R., dos Santos, V. A. P. M., Serrano, L., Klipp, E., et al. (2013) · Molecular Systems Biology

Microbial Metabolic Engineering and BioproductionGene Regulatory Network Analysis

Cited by 89

Bringing metabolic networks to life: integration of kinetic, metabolic, and proteomic data

Liebermeister, W., & Klipp, E. (2006) · Theoretical Biology and Medical Modelling

Microbial Metabolic Engineering and BioproductionGene Regulatory Network Analysis

Cited by 82

Modelling the Regulation of Thermal Adaptation in Candida albicans, a Major Fungal Pathogen of Humans

Leach, M. D., Tyc, K. M., Brown, A. J. P., & Klipp, E. (2012) · PLoS ONE

Heat shock proteins researchFungal and yeast genetics research

Cited by 61

Bridging the gaps in systems biology

Cvijovic, M., Almquist, J., Hagmar, J., Hohmann, S., Kaltenbach, H.-M., Klipp, E., Krantz, M., Mendes, P., Nelander, S., Nielsen, J., et al. (2014) · Molecular Genetics and Genomics

Gene Regulatory Network AnalysisBioinformatics and Genomic Networks

Cited by 40

Onset of Immune Senescence Defined by Unbiased Pyrosequencing of Human Immunoglobulin mRNA Repertoires

Rubelt, F., Sievert, V., Knaust, F., Diener, C., Lim, T. S., Skriner, K., Klipp, E., Reinhardt, R., Lehrach, H., & Konthur, Z. (2012) · PLoS ONE

T-cell and B-cell ImmunologyMonoclonal and Polyclonal Antibodies Research

Cited by 37

Model-based inference of biochemical parameters and dynamic properties of microbial signal transduction networks

Schaber, J., & Klipp, E. (2011) · Current Opinion in Biotechnology

Gene Regulatory Network AnalysisMicrobial Metabolic Engineering and Bioproduction

Cited by 33

Role of gB and pUS3 in Equine Herpesvirus 1 Transfer between Peripheral Blood Mononuclear Cells and Endothelial Cells: a Dynamic In Vitro Model

Spiesschaert, B., Goldenbogen, B., Taferner, S., Schade, M., Mahmoud, M., Klipp, E., Osterrieder, N., & Azab, W. (2015) · Journal of Virology

Herpesvirus Infections and TreatmentsAnimal Virus Infections Studies

Cited by 24