Wolf, Guy

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion

van Dijk, D., Sharma, R., Nainys, J., Yim, K., Kathail, P., Carr, A. J., Burdziak, C., Moon, K. R., Chaffer, C. L., Pattabiraman, D., et al. (2018) · Cell

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 1,829

Visualizing structure and transitions in high-dimensional biological data

Moon, K. R., van Dijk, D., Wang, Z., Gigante, S., Burkhardt, D. B., Chen, W. S., Yim, K., Elzen, A. V. D., Hirn, M. J., Coifman, R. R., et al. (2019) · Nature Biotechnology

Single-cell and spatial transcriptomicsTopological and Geometric Data Analysis

Cited by 1,065

Quantifying the effect of experimental perturbations at single-cell resolution

Burkhardt, D. B., Stanley, J. S., Tong, A., Perdigoto, A. L., Gigante, S. A., Herold, K. C., Wolf, G., Giraldez, A. J., van Dijk, D., & Krishnaswamy, S. (2021) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 226

Multiscale PHATE identifies multimodal signatures of COVID-19

Kuchroo, M., Huang, J., Wong, P., Grenier, J.-C., Shung, D., Tong, A., Lucas, C., Klein, J., Burkhardt, D. B., Gigante, S., et al. (2022) · Nature Biotechnology

Single-cell and spatial transcriptomicsTopological and Geometric Data Analysis

Cited by 72

Improving and generalizing flow-based generative models with minibatch optimal transport

Tong, A., Fatras, K., Malkin, N., Huguet, G., Zhang, Y., Rector-Brooks, J., Wolf, G., & Bengio, Y. (2023) · arXiv

Generative Adversarial Networks and Image SynthesisModel Reduction and Neural Networks

Cited by 50

Uncovering axes of variation among single-cell cancer specimens

Chen, W. S., Zivanovic, N., van Dijk, D., Wolf, G., Bodenmiller, B., & Krishnaswamy, S. (2020) · Nature Methods

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 48