Kamimoto, Kenji

Dissecting cell identity via network inference and in silico gene perturbation

Kamimoto, K., Stringa, B., Hoffmann, C. M., Jindal, K., Solnica-Krezel, L., & Morris, S. A. (2023) · Nature

Gene Regulatory Network AnalysisSingle-cell and spatial transcriptomics

Cited by 677

Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes

Jindal, K., Adil, M. T., Yamaguchi, N., Yang, X., Wang, H. C., Kamimoto, K., Rivera-Gonzalez, G. C., & Morris, S. A. (2024) · Nature Biotechnology

Single-cell and spatial transcriptomicsPluripotent Stem Cells Research

Cited by 82

CellOracle: Dissecting cell identity via network inference and in silico gene perturbation

Kamimoto, K., Hoffmann, C. M., & Morris, S. A. (2020) · bioRxiv (Cold Spring Harbor Laboratory)

Gene Regulatory Network AnalysisSingle-cell and spatial transcriptomics

Cited by 81

Defining cardiac functional recovery in end-stage heart failure at single-cell resolution

Amrute, J. M., Lai, L., Ma, P., Koenig, A. L., Kamimoto, K., Bredemeyer, A., Shankar, T. S., Kuppe, C., Kadyrov, F. F., Schulte, L. J., et al. (2023) · Nature Cardiovascular Research

Cardiac Fibrosis and RemodelingMechanical Circulatory Support Devices

Cited by 79

Gene regulatory network reconfiguration in direct lineage reprogramming

Kamimoto, K., Adil, M. T., Jindal, K., Hoffmann, C. M., Kong, W., Yang, X., & Morris, S. A. (2023) · Stem Cell Reports

Gene Regulatory Network AnalysisPluripotent Stem Cells Research

Cited by 42

Defining Cardiac Recovery at Single Cell Resolution

Amrute, J. M., Lai, L., Ma, P., Koenig, A. L., Kamimoto, K., Bredemeyer, A., Shankar, T. S., Kuppe, C., Kadyrov, F. F., Schulte, L. J., et al. (2022) · bioRxiv (Cold Spring Harbor Laboratory)

Cardiac Fibrosis and RemodelingCongenital heart defects research

Cited by 6