Woyke, Tanja

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

The Genome Standards Consortium, Bowers, R. M., Kyrpides, N. C., Stepanauskas, R., Harmon-Smith, M., Doud, D., Reddy, T. B. K., Schulz, F., Jarett, J., Rivers, A. R., et al. (2017) · Nature Biotechnology

Genomics and Phylogenetic StudiesResearch Data Management Practices

Cited by 2,624

Insights into the phylogeny and coding potential of microbial dark matter

Rinke, C., Schwientek, P., Sczyrba, A., Ivanova, N. N., Anderson, I. J., Cheng, J.-F., Darling, A., Malfatti, S., Swan, B. K., Gies, E. A., et al. (2013) · Nature

Genomics and Phylogenetic StudiesMicrobial Community Ecology and Physiology

Cited by 2,394

Metagenomic discovery of biomass-degrading genes and genomes from cow rumen

Hess, M., Sczyrba, A., Egan, R., Kim, T.-W., Chokhawala, H., Schroth, G., Luo, S., Clark, D. S., Chen, F., Zhang, T., et al. (2011) · Science

Biofuel production and bioconversionAnaerobic Digestion and Biogas Production

Cited by 1,319

Improving the coverage of the cyanobacterial phylum using diversity driven genome sequencing

Shih, P. M., Wu, D., Latifi, A., Axen, S. D., Fewer, D. P., Talla, E., Calteau, A., Cai, F., Tandeau de Marsac, N., Rippka, R., et al. (2013) · Proceedings of the National Academy of Sciences

Genomics and Phylogenetic StudiesPhotosynthetic Processes and Mechanisms

Cited by 800

Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection

Hungate1000 project collaborators, Seshadri, R., Leahy, S. C., Attwood, G. T., Teh, K. H., Lambie, S. C., Cookson, A. L., Eloe-Fadrosh, E. A., Pavlopoulos, G. A., Hadjithomas, M., et al. (2018) · Nature Biotechnology

Ruminant Nutrition and Digestive PhysiologyAnaerobic Digestion and Biogas Production

Cited by 624

IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata

Camargo, A. P., Nayfach, S., Chen, I.-M. A., Palaniappan, K., Ratner, A., Chu, K., Ritter, S. J., Reddy, T. B. K., Mukherjee, S., Schulz, F., et al. (2023) · Nucleic Acids Research

Bacteriophages and microbial interactionsGenomics and Phylogenetic Studies

Cited by 446

IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata

Camargo, A. P., Call, L., Roux, S., Nayfach, S., Huntemann, M., Palaniappan, K., Ratner, A., Chu, K., Mukherjeep, S., Reddy, T. B. K., et al. (2024) · Nucleic Acids Research

Genomics and Phylogenetic StudiesBacterial Genetics and Biotechnology

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Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount

Field, E. K., Sczyrba, A., Lyman, A. E., Harris, C. C., Woyke, T., Stepanauskas, R., & Emerson, D. (2015) · The ISME Journal

Microbial Community Ecology and PhysiologyMetal Extraction and Bioleaching

Cited by 79

Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea

Murali, R., Yu, H., Speth, D. R., Wu, F., Metcalfe, K. S., Crémière, A., Laso-Pèrez, R., Malmstrom, R. R., Goudeau, D., Woyke, T., et al. (2023) · PLOS Biology

Methane Hydrates and Related PhenomenaMicrobial Fuel Cells and Bioremediation

Cited by 62

Enhanced terrestrial Fe(II) mobilization identified through a novel mechanism of microbially driven cave formation in Fe(III)-rich rocks

Parker, C. W., Senko, J. M., Auler, A. S., Sasowsky, I. D., Schulz, F., Woyke, T., & Barton, H. A. (2022) · Scientific Reports

Geochemistry and Elemental AnalysisPaleontology and Stratigraphy of Fossils

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