Shin, Jay W.

The human cell atlas

Regev, A., Teichmann, S. A., Lander, E. S., Amit, I., Benoist, C., Birney, E., Bodenmiller, B., Campbell, P., Carninci, P., Clatworthy, M., et al. (2017) · eLife

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 2,232

An integrated expression atlas of miRNAs and their promoters in human and mouse

The FANTOM Consortium, de Rie, D., Abugessaisa, I., Alam, T., Arner, E., Arner, P., Ashoor, H., Åström, G., Babina, M., Bertin, N., et al. (2017) · Nature Biotechnology

MicroRNA in disease regulationGenomics and Chromatin Dynamics

Cited by 561

Single-cell transcriptomics reveals expansion of cytotoxic CD4 T cells in supercentenarians

Hashimoto, K., Kouno, T., Ikawa, T., Hayatsu, N., Miyajima, Y., Yabukami, H., Terooatea, T., Sasaki, T., Suzuki, T., Valentine, M., et al. (2019) · Proceedings of the National Academy of Sciences

T-cell and B-cell ImmunologySingle-cell and spatial transcriptomics

Cited by 343

FANTOM5 CAGE profiles of human and mouse samples

Noguchi, S., Arakawa, T., Fukuda, S., Furuno, M., Hasegawa, A., Hori, F., Ishikawa-Kato, S., Kaida, K., Kaiho, A., Kanamori-Katayama, M., et al. (2017) · Scientific Data

Genomics and Chromatin DynamicsGenomics and Phylogenetic Studies

Cited by 310

Comparison of CAGE and RNA-seq transcriptome profiling using clonally amplified and single-molecule next-generation sequencing

Kawaji, H., Lizio, M., Itoh, M., Kanamori-Katayama, M., Kaiho, A., Nishiyori-Sueki, H., Shin, J. W., Kojima-Ishiyama, M., Kawano, M., Murata, M., et al. (2014) · Genome Research

Genomics and Phylogenetic StudiesSingle-cell and spatial transcriptomics

Cited by 109

Reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts

Suzuki, T., Nakano-Ikegaya, M., Yabukami-Okuda, H., de Hoon, M., Severin, J., Saga-Hatano, S., Shin, J. W., Kubosaki, A., Simon, C., Hasegawa, Y., et al. (2012) · PLoS ONE

Gene Regulatory Network AnalysisGenomics and Chromatin Dynamics

Cited by 41

A transient disruption of fibroblastic transcriptional regulatory network facilitates trans-differentiation

Tomaru, Y., Hasegawa, R., Suzuki, T., Sato, T., Kubosaki, A., Suzuki, M., Kawaji, H., Forrest, A. R. R., Hayashizaki, Y., FANTOM Consortium, et al. (2014) · Nucleic Acids Research

Pluripotent Stem Cells ResearchGene Regulatory Network Analysis

Cited by 39

Establishment of single-cell screening system for the rapid identification of transcriptional modulators involved in direct cell reprogramming

Shin, J. W., Suzuki, T., Ninomiya, N., Kishima, M., Hasegawa, Y., Kubosaki, A., Yabukami, H., Hayashizaki, Y., & Suzuki, H. (2012) · Nucleic Acids Research

Pluripotent Stem Cells ResearchSingle-cell and spatial transcriptomics

Cited by 12