Kolodziejczyk, Aleksandra A.

Dysbiosis and the immune system

Levy, M., Kolodziejczyk, A. A., Thaiss, C. A., & Elinav, E. (2017) · Nature Reviews Immunology

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 1,769

The Technology and Biology of Single-Cell RNA Sequencing

Kolodziejczyk, A. A., Kim, J. K., Svensson, V., Marioni, J. C., & Teichmann, S. A. (2015) · Molecular Cell

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 1,487

Diet-microbiota interactions and personalized nutrition

Kolodziejczyk, A. A., Zheng, D., & Elinav, E. (2019) · Nature Reviews Microbiology

Gut microbiota and healthNutrition, Genetics, and Disease

Cited by 879

Classification of low quality cells from single-cell RNA-seq data

Ilicic, T., Kim, J. K., Kolodziejczyk, A. A., Bagger, F. O., McCarthy, D. J., Marioni, J. C., & Teichmann, S. A. (2016) · Genome Biology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 693

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

Kolodziejczyk, A. A., Kim, J. K., Tsang, J. C. H., Ilicic, T., Henriksson, J., Natarajan, K. N., Tuck, A. C., Gao, X., Bühler, M., Liu, P., et al. (2015) · Cell Stem Cell

Pluripotent Stem Cells ResearchSingle-cell and spatial transcriptomics

Cited by 570

The role of the microbiome in NAFLD and NASH

Kolodziejczyk, A. A., Zheng, D., Shibolet, O., & Elinav, E. (2019) · EMBO Molecular Medicine

Gut microbiota and healthLiver Disease Diagnosis and Treatment

Cited by 523

Aging increases cell-to-cell transcriptional variability upon immune stimulation

Martinez-Jimenez, C. P., Eling, N., Chen, H.-C., Vallejos, C. A., Kolodziejczyk, A. A., Connor, F., Stojic, L., Rayner, T. F., Stubbington, M. J. T., Teichmann, S. A., et al. (2017) · Science

Single-cell and spatial transcriptomicsGenetics, Aging, and Longevity in Model Organisms

Cited by 339

Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

Kim, J. K., Kolodziejczyk, A. A., Ilicic, T., Teichmann, S. A., & Marioni, J. C. (2015) · Nature Communications

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 251

The spatiotemporal program of zonal liver regeneration following acute injury

Ben-Moshe, S., Veg, T., Manco, R., Dan, S., Papinutti, D., Lifshitz, A., Kolodziejczyk, A. A., Bahar Halpern, K., Elinav, E., & Itzkovitz, S. (2022) · Cell Stem Cell

Liver physiology and pathologyDrug-Induced Hepatotoxicity and Protection

Cited by 224