Kandathil, Shaun M.

A guide to machine learning for biologists

Greener, J. G., Kandathil, S. M., Moffat, L., & Jones, D. T. (2022) · Nature Reviews Molecular Cell Biology

Machine Learning in BioinformaticsGene expression and cancer classification

Cited by 2,127

Deep learning extends de novo protein modelling coverage of genomes using iteratively predicted structural constraints

Greener, J. G., Kandathil, S. M., & Jones, D. T. (2019) · Nature Communications

Protein Structure and DynamicsEnzyme Structure and Function

Cited by 178

Exploring structural diversity across the protein universe with The Encyclopedia of Domains

Lau, A. M., Bordin, N., Kandathil, S. M., Sillitoe, I., Waman, V. P., Wells, J., Orengo, C. A., & Jones, D. T. (2024) · Science

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 140

Exploring structural diversity across the protein universe with The Encyclopedia of Domains

Lau, A. M., Bordin, N., Kandathil, S. M., Sillitoe, I., Waman, V. P., Wells, J., Orengo, C. A., & Jones, D. T. (2024) · Science

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 140

Merizo: a rapid and accurate protein domain segmentation method using invariant point attention

Lau, A. M., Kandathil, S. M., & Jones, D. T. (2023) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 48

Merizo: a rapid and accurate domain segmentation method using invariant point attention

Lau, A. M., Kandathil, S. M., & Jones, D. T. (2023) · Nature Communications

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 47

Design in the DARK: Learning Deep Generative Models for De Novo Protein Design

Moffat, L., Kandathil, S. M., & Jones, D. T. (2022) · bioRxiv (Cold Spring Harbor Laboratory)

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 25

Ultrafast end-to-end protein structure prediction enables high-throughput exploration of uncharacterised proteins

Kandathil, S. M., Greener, J. G., Lau, A. M., & Jones, D. T. (2020) · bioRxiv (Cold Spring Harbor Laboratory)

Protein Structure and DynamicsMachine Learning in Bioinformatics

Cited by 8