Pezeshkian, Weria

Martini 3 Coarse-Grained Force Field for Carbohydrates

Grünewald, F., Punt, M. H., Jefferys, E. E., Vainikka, P. A., König, M., Virtanen, V., Meyer, T. A., Pezeshkian, W., Gormley, A. J., Karonen, M., et al. (2022) · Journal of Chemical Theory and Computation

Advanced Physical and Chemical Molecular InteractionsProtein Structure and Dynamics

Cited by 116

Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling

Pezeshkian, W., Grünewald, F., Narykov, O., Lu, S., Arkhipova, V., Solodovnikov, A., Wassenaar, T. A., Marrink, S. J., & Korkin, D. (2023) · Structure

Protein Structure and DynamicsSARS-CoV-2 and COVID-19 Research

Cited by 60

Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling

Pezeshkian, W., Grünewald, F., Narykov, O., Lu, S., Arkhipova, V., Solodovnikov, A., Wassenaar, T. A., Marrink, S. J., & Korkin, D. (2021) · Structure

Protein Structure and DynamicsSARS-CoV-2 and COVID-19 Research

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Bringing the genetically minimal cell to life on a computer in 4D

Thornburg, Z. R., Maytin, A., Kwon, J., Brier, T. A., Gilbert, B. R., Fu, E., Gao, Y.-L., Quenneville, J., Wu, T., Li, H., et al. (2026) · Cell

Gene Regulatory Network AnalysisRNA and protein synthesis mechanisms

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Bringing the Genetically Minimal Cell to Life on a Computer in 4D

Thornburg, Z. R., Maytin, A., Kwon, J., Brier, T. A., Gilbert, B. R., Fu, E., Gao, Y.-L., Quenneville, J., Wu, T., Li, H., et al. (2025) · Cell

Gene Regulatory Network AnalysisRNA and protein synthesis mechanisms

Cited by 44

Synthetic Membrane Shaper for Controlled Liposome Deformation

De Franceschi, N., Pezeshkian, W., Fragasso, A., Bruininks, B. M. H., Tsai, S., Marrink, S. J., & Dekker, C. (2023) · ACS Nano

Lipid Membrane Structure and BehaviorAdvanced biosensing and bioanalysis techniques

Cited by 40

Mesoscale simulation of biomembranes with FreeDTS

Pezeshkian, W., & Ipsen, J. H. (2024) · Nature Communications

Lipid Membrane Structure and BehaviorProtein Structure and Dynamics

Cited by 24

Integrative Molecular Dynamics Simulations Untangle Cross-Linking Data to Unveil Mitochondrial Protein Distributions

Schuhmann, F., Akkaya, K. C., Puchkov, D., Lehmann, M., Liu, F., & Pezeshkian, W. (2024) · Angewandte Chemie International Edition

Protein Structure and DynamicsAdvanced Proteomics Techniques and Applications

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Integrative Molecular Dynamics Simulations Untangle Cross‐Linking Data to Unveil Mitochondrial Protein Distributions

Schuhmann, F., Akkaya, K. C., Puchkov, D., Hohensee, S., Lehmann, M., Liu, F., & Pezeshkian, W. (2025) · Angewandte Chemie International Edition

Protein Structure and DynamicsAdvanced Proteomics Techniques and Applications

Cited by 18

TS2CG as a membrane builder

Schuhmann, F., Stevens, J. A., Rahmani, N., Lindahl, I., Brown, C. M., Brasnett, C., Anastasiou, D., Bravo Vidal, A., Geiger, B. J., Marrink, S.-J., et al. (2025) · Journal of Chemical Theory and Computation

Lipid Membrane Structure and BehaviorProtein Structure and Dynamics

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