Sahraeian, Sayed Mohammad Ebrahim

A robust benchmark for detection of germline large deletions and insertions

Zook, J. M., Hansen, N. F., Olson, N. D., Chapman, L., Mullikin, J. C., Xiao, C., Sherry, S., Koren, S., Phillippy, A. M., Boutros, P. C., et al. (2020) · Nature Biotechnology

Genomic variations and chromosomal abnormalitiesGenomics and Phylogenetic Studies

Cited by 418

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

Sahraeian, S. M. E., Mohiyuddin, M., Sebra, R., Tilgner, H., Afshar, P. T., Au, K. F., Bani Asadi, N., Gerstein, M. B., Wong, W. H., Snyder, M. P., et al. (2017) · Nature Communications

Genomics and Phylogenetic StudiesSingle-cell and spatial transcriptomics

Cited by 376

Curated variation benchmarks for challenging medically relevant autosomal genes

Wagner, J., Olson, N. D., Harris, L., McDaniel, J., Cheng, H., Fungtammasan, A., Hwang, Y.-C., Gupta, R., Wenger, A. M., Rowell, W. J., et al. (2022) · Nature Biotechnology

Genomics and Phylogenetic StudiesGenomics and Rare Diseases

Cited by 241

Achieving robust somatic mutation detection with deep learning models derived from reference data sets of a cancer sample

Sahraeian, S. M. E., Fang, L. T., Karagiannis, K., Moos, M., Smith, S., Santana-Quintero, L., Xiao, C., Colgan, M., Hong, H., Mohiyuddin, M., et al. (2022) · Genome biology

Cancer Genomics and DiagnosticsGenomics and Phylogenetic Studies

Cited by 27