Pratt, Dexter

Evaluation of large language models for discovery of gene set function

Hu, M., Alkhairy, S., Lee, I., Pillich, R. T., Fong, D., Smith, K., Bachelder, R., Ideker, T., & Pratt, D. (2025) · Nature Methods

Bioinformatics and Genomic NetworksBiomedical Text Mining and Ontologies

Cited by 104

Interpretation of cancer mutations using a multiscale map of protein systems

Zheng, F., Kelly, M. R., Ramms, D. J., Heintschel, M. L., Tao, K., Tutuncuoglu, B., Lee, J. J., Ono, K., Foussard, H., Chen, M., et al. (2021) · Science

Bioinformatics and Genomic NetworksCancer Genomics and Diagnostics

Cited by 81

State of the interactomes: an evaluation of molecular networks for generating biological insights

Wright, S. N., Colton, S., Schaffer, L. V., Pillich, R. T., Churas, C., Pratt, D., & Ideker, T. (2024) · Molecular Systems Biology

Bioinformatics and Genomic NetworksBiomedical Text Mining and Ontologies

Cited by 32