Hoffman, Michael M.
University Health Network · University of Toronto · Princess Margaret Cancer Centre · Vector Institute
12 papers on CoChatORCID 0000-0002-4517-1562
Most cited papers
- Verified
TRIPOD+AI statement: updated guidance for reporting clinical prediction models that use regression or machine learning methods
Collins, G. S., Moons, K. G. M., Dhiman, P., Riley, R. D., Beam, A. L., Van Calster, B., Ghassemi, M., Liu, X., Reitsma, J. B., van Smeden, M., et al. (2024) · BMJ
Meta-analysis and systematic reviewsStatistical Methods in Epidemiology
Cited by 4,718
- Verified
Opportunities and obstacles for deep learning in biology and medicine
Ching, T., Himmelstein, D. S., Beaulieu-Jones, B. K., Kalinin, A. A., Do, B. T., Way, G. P., Ferrero, E., Agapow, P.-M., Zietz, M., Hoffman, M. M., et al. (2018) · Journal of The Royal Society Interface
Machine Learning in HealthcareArtificial Intelligence in Healthcare and Education
Cited by 2,310
- Verified
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
Landt, S. G., Marinov, G. K., Kundaje, A., Kheradpour, P., Pauli, F., Batzoglou, S., Bernstein, B. E., Bickel, P., Brown, J. B., Cayting, P., et al. (2012) · Genome Research
Genomics and Chromatin DynamicsGenomics and Phylogenetic Studies
Cited by 2,033
- Verified
Sensitive tumour detection and classification using plasma cell-free DNA methylomes
Shen, S. Y., Singhania, R., Fehringer, G., Chakravarthy, A., Roehrl, M. H. A., Chadwick, D., Zuzarte, P. C., Borgida, A., Wang, T. T., Li, T., et al. (2018) · Nature
Cancer Genomics and DiagnosticsEpigenetics and DNA Methylation
Cited by 983
- Verified
Machine learning for integrating data in biology and medicine: principles, practice, and opportunities
Zitnik, M., Nguyen, F., Wang, B., Leskovec, J., Goldenberg, A., & Hoffman, M. M. (2019) · Information Fusion
Bioinformatics and Genomic NetworksBiomedical Text Mining and Ontologies
Cited by 675
- Verified
Transparency and reproducibility in artificial intelligence
Haibe-Kains, B., Adam, G. A., Hosny, A., Khodakarami, F., Massive Analysis Quality Control (MAQC) Society Board of Directors, Shraddha, T., Kusko, R., Sansone, S.-A., Tong, W., Wolfinger, R. D., et al. (2020) · Nature
Explainable Artificial Intelligence (XAI)Ethics and Social Impacts of AI
Cited by 540
- Verified
Comparative analysis of metazoan chromatin organization
Ho, J. W. K., Jung, Y. L., Liu, T., Alver, B. H., Lee, S., Ikegami, K., Sohn, K.-A., Minoda, A., Tolstorukov, M. Y., Appert, A., et al. (2014) · Nature
Genomics and Chromatin DynamicsEpigenetics and DNA Methylation
Cited by 390
- Verified
Understanding metric-related pitfalls in image analysis validation
Reinke, A., Tizabi, M. D., Baumgartner, M., Eisenmann, M., Heckmann-Nötzel, D., Kavur, A. E., Rädsch, T., Sudre, C. H., Acion, L., Antonelli, M., et al. (2024) · Nature Methods
Cell Image Analysis TechniquesMedical Image Segmentation Techniques
Cited by 241
- Verified
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression
Libbrecht, M. W., Ay, F., Hoffman, M. M., Gilbert, D. M., Bilmes, J. A., & Noble, W. S. (2015) · Genome Research
Genomics and Chromatin DynamicsChromatin Remodeling and Cancer
Cited by 84
- Verified
Metrics reloaded: Recommendations for image analysis validation
Maier-Hein, L., Reinke, A., Godau, P., Tizabi, M. D., Buettner, F., Christodoulou, E., Glocker, B., Isensee, F., Kleesiek, J., Kozubek, M., et al. (2022) · arXiv
Cell Image Analysis TechniquesMedical Image Segmentation Techniques
Cited by 59
- Verified
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet
Viner, C., Ishak, C. A., Johnson, J., Walker, N. J., Shi, H., Sjöberg-Herrera, M. K., Shen, S. Y., Lardo, S. M., Adams, D. J., Ferguson-Smith, A. C., et al. (2024) · Genome Biology
Genomics and Chromatin DynamicsEpigenetics and DNA Methylation
Cited by 30
- Verified
Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet
Viner, C., Ishak, C. A., Johnson, J., Walker, N. J., Shi, H., Sjöberg-Herrera, M. K., Shen, S. Y., Lardo, S. M., Adams, D. J., Ferguson-Smith, A. C., et al. (2016) · bioRxiv (Cold Spring Harbor Laboratory)
Genomics and Chromatin DynamicsEpigenetics and DNA Methylation
Cited by 18
Go further with a free account
Verify every reference, keep papers in a library, and ask questions across them.
Sign up - it is free