Marr, Carsten

destiny : diffusion maps for large-scale single-cell data in R

Angerer, P., Haghverdi, L., Büttner, M., Theis, F. J., Marr, C., & Buettner, F. (2016) · Bioinformatics

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 640

Increasing Neural Stem Cell Division Asymmetry and Quiescence Are Predicted to Contribute to the Age-Related Decline in Neurogenesis

Bast, L., Calzolari, F., Strasser, M. K., Hasenauer, J., Theis, F. J., Ninkovic, J., & Marr, C. (2018) · Cell Reports

Neurogenesis and neuroplasticity mechanismsDevelopmental Biology and Gene Regulation

Cited by 50

Multi-task Learning of a Deep K-Nearest Neighbour Network for Histopathological Image Classification and Retrieval

Peng, T., Boxberg, M., Weichert, W., Navab, N., & Marr, C. (2019) · Lecture Notes in Computer Science

AI in cancer detectionImage Retrieval and Classification Techniques

Cited by 48

Generating dermatopathology reports from gigapixel whole slide images with HistoGPT

Tran, M., Schmidle, P., Guo, R. R., Wagner, S. J., Koch, V., Lupperger, V., Novotny, B., Murphree, D. H., Hardway, H. D., D’Amato, M., et al. (2025) · Nature Communications

AI in cancer detectionArtificial Intelligence in Healthcare and Education

Cited by 36

Lineage marker synchrony in hematopoietic genealogies refutes the PU.1/GATA1 toggle switch paradigm

Strasser, M. K., Hoppe, P. S., Loeffler, D., Kokkaliaris, K. D., Schroeder, T., Theis, F. J., & Marr, C. (2018) · Nature Communications

Gene Regulatory Network AnalysisHematopoietic Stem Cell Transplantation

Cited by 26

cgCorrect: a method to correct for confounding cell–cell variation due to cell growth in single-cell transcriptomics

Blasi, T., Buettner, F., Strasser, M. K., Marr, C., & Theis, F. J. (2017) · Physical Biology

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

Cited by 18

Parameter inference with analytical propagators for stochastic models of autoregulated gene expression

Veerman, F., Popović, N., & Marr, C. (2022) · International Journal of Nonlinear Sciences and Numerical Simulation

Gene Regulatory Network Analysisstochastic dynamics and bifurcation

Cited by 4

Parameter inference with analytical propagators for stochastic models of autoregulated gene expression

Veerman, F., Popović, N., & Marr, C. (2018) · International Journal of Nonlinear Sciences and Numerical Simulation

Gene Regulatory Network Analysisstochastic dynamics and bifurcation

Cited by 4

Image Analysis: Understanding and Mitigating Batch Effects in Histopathology

Gindra, R. H., Boushehri, S. S., Wagner, S. J., Tran, M., Winter, D. J. E., Schnabel, J. A., Saur, D., Marr, C., & Peng, T. (2025) · Trillium Pathology

AI in cancer detectionArtificial Intelligence in Healthcare and Education

Cited by 2