Kubosaki, Atsutaka

An atlas of combinatorial transcriptional regulation in mouse and man

Ravasi, T., Suzuki, H., Cannistraci, C. V., Katayama, S., Bajic, V. B., Tan, K., Akalin, A., Schmeier, S., Kanamori-Katayama, M., Bertin, N., et al. (2010) · Cell

Genomics and Chromatin DynamicsGene Regulatory Network Analysis

Cited by 715

FANTOM5 CAGE profiles of human and mouse samples

Noguchi, S., Arakawa, T., Fukuda, S., Furuno, M., Hasegawa, A., Hori, F., Ishikawa-Kato, S., Kaida, K., Kaiho, A., Kanamori-Katayama, M., et al. (2017) · Scientific Data

Genomics and Chromatin DynamicsGenomics and Phylogenetic Studies

Cited by 310

Reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts

Suzuki, T., Nakano-Ikegaya, M., Yabukami-Okuda, H., de Hoon, M., Severin, J., Saga-Hatano, S., Shin, J. W., Kubosaki, A., Simon, C., Hasegawa, Y., et al. (2012) · PLoS ONE

Gene Regulatory Network AnalysisGenomics and Chromatin Dynamics

Cited by 41

A transient disruption of fibroblastic transcriptional regulatory network facilitates trans-differentiation

Tomaru, Y., Hasegawa, R., Suzuki, T., Sato, T., Kubosaki, A., Suzuki, M., Kawaji, H., Forrest, A. R. R., Hayashizaki, Y., FANTOM Consortium, et al. (2014) · Nucleic Acids Research

Pluripotent Stem Cells ResearchGene Regulatory Network Analysis

Cited by 39

The combination of gene perturbation assay and ChIP-chip reveals functional direct target genes for IRF8 in THP-1 cells

Kubosaki, A., Lindgren, G., Tagami, M., Simon, C., Tomaru, Y., Miura, H., Suzuki, T., Arner, E., Forrest, A. R. R., Irvine, K. M., et al. (2010) · Molecular Immunology

interferon and immune responsesGenomics and Chromatin Dynamics

Cited by 29

Regulatory interdependence of myeloid transcription factors revealed by Matrix RNAi analysis

Tomaru, Y., Simon, C., Forrest, A. R., Miura, H., Kubosaki, A., Hayashizaki, Y., & Suzuki, M. (2009) · Genome biology

Gene Regulatory Network AnalysisGenomics and Chromatin Dynamics

Cited by 21

Establishment of single-cell screening system for the rapid identification of transcriptional modulators involved in direct cell reprogramming

Shin, J. W., Suzuki, T., Ninomiya, N., Kishima, M., Hasegawa, Y., Kubosaki, A., Yabukami, H., Hayashizaki, Y., & Suzuki, H. (2012) · Nucleic Acids Research

Pluripotent Stem Cells ResearchSingle-cell and spatial transcriptomics

Cited by 12