Clausen, Philip Thomas Lanken Conradsen

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Hendriksen, R. S., Munk, P., Njage, P., van Bunnik, B., McNally, L., Lukjancenko, O., Röder, T., Nieuwenhuijse, D., Pedersen, S. K., Kjeldgaard, J., et al. (2019) · Nature Communications

Pharmaceutical and Antibiotic Environmental ImpactsAntibiotic Resistance in Bacteria

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ResFinder–an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes

Florensa, A. F., Kaas, R. S., Clausen, P. T. L. C., Aytan-Aktug, D., & Aarestrup, F. M. (2022) · Microbial Genomics

Antibiotic Resistance in BacteriaAntibiotic Use and Resistance

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Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models with PathogenFinder2

Ferrer Florensa, A., Almagro Armenteros, J. J., Kaas, R. S., Clausen, P. T. L. C., Nielsen, H., Rost, B., & Aarestrup, F. M. (2026) · Bioinformatics

Genomics and Phylogenetic StudiesMachine Learning in Bioinformatics

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