Zhou, Jingtian

Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex

Luo, C., Keown, C. L., Kurihara, L., Zhou, J., He, Y., Li, J., Castanon, R., Lucero, J., Nery, J. R., Sandoval, J. P., et al. (2017) · Science

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 545

A multimodal cell census and atlas of the mammalian primary motor cortex

BRAIN Initiative Cell Census Network (BICCN), BRAIN Initiative Cell Census Network (BICCN) Corresponding authors, Callaway, E. M., Dong, H.-W., Ecker, J. R., Hawrylycz, M. J., Huang, Z. J., Lein, E. S., Ngai, J., Osten, P., et al. (2021) · Nature

Single-cell and spatial transcriptomicsGenomics and Chromatin Dynamics

Cited by 522

Simultaneous profiling of 3D genome structure and DNA methylation in single human cells

Lee, D.-S., Luo, C., Zhou, J., Chandran, S., Rivkin, A., Bartlett, A., Nery, J. R., Fitzpatrick, C., O’Connor, C., Dixon, J. R., et al. (2019) · Nature Methods

Genomics and Chromatin DynamicsEpigenetics and DNA Methylation

Cited by 340

DNA Methylation Atlas of the Mouse Brain at Single-Cell Resolution

Liu, H., Zhou, J., Tian, W., Luo, C., Bartlett, A., Aldridge, A., Lucero, J., Osteen, J. K., Nery, J. R., Chen, H., et al. (2020) · Nature

Single-cell and spatial transcriptomicsEpigenetics and DNA Methylation

Cited by 290

DNA methylation atlas of the mouse brain at single-cell resolution

Liu, H., Zhou, J., Tian, W., Luo, C., Bartlett, A., Aldridge, A., Lucero, J., Osteen, J. K., Nery, J. R., Chen, H., et al. (2021) · Nature

Single-cell and spatial transcriptomicsEpigenetics and DNA Methylation

Cited by 289

Robust single-cell DNA methylome profiling with snmC-seq2

Luo, C., Rivkin, A., Zhou, J., Sandoval, J. P., Kurihara, L., Lucero, J., Castanon, R., Nery, J. R., Pinto-Duarte, A., Bui, B., et al. (2018) · Nature Communications

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 189

Robust single-cell Hi-C clustering by convolution- and random-walk-based imputation

Zhou, J., Ma, J., Chen, Y., Cheng, C., Bao, B., Peng, J., Sejnowski, T. J., Dixon, J. R., & Ecker, J. R. (2019) · Proceedings of the National Academy of Sciences

Genomics and Chromatin DynamicsSingle-cell and spatial transcriptomics

Cited by 180

Single-cell DNA methylation and 3D genome architecture in the human brain

Tian, W., Zhou, J., Bartlett, A., Zeng, Q., Liu, H., Castanon, R. G., Kenworthy, M., Altshul, J., Valadon, C., Aldridge, A., et al. (2023) · Science

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 154

Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain

Liu, H., Zeng, Q., Zhou, J., Bartlett, A., Wang, B.-A., Berube, P., Tian, W., Kenworthy, M., Altshul, J., Nery, J. R., et al. (2023) · Nature

Epigenetics and DNA MethylationSingle-cell and spatial transcriptomics

Cited by 139

Biomni: A general-purpose biomedical ai agent

Huang, K., Zhang, S., Wang, H., Qu, Y., Lu, Y., Roohani, Y., Li, R., Qiu, L., Li, G., Zhang, J., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory)

Biomedical Text Mining and OntologiesArtificial Intelligence in Healthcare and Education

Cited by 125

Epigenomic Diversity of Cortical Projection Neurons in the Mouse Brain

Zhang, Z., Zhou, J., Tan, P., Pang, Y., Rivkin, A., Kirchgessner, M. A., Williams, E., Lee, C.-T., Liu, H., Franklin, A. D., et al. (2020) · Nature

Single-cell and spatial transcriptomicsEpigenetics and DNA Methylation

Cited by 75