Finak, Greg

MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data

Finak, G., McDavid, A., Yajima, M., Deng, J., Gersuk, V., Shalek, A. K., Slichter, C. K., Miller, H. W., McElrath, M. J., Prlic, M., et al. (2015) · Genome Biology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 3,159

Safety and immunogenicity of a mRNA rabies vaccine in healthy adults: an open-label, non-randomised, prospective, first-in-human phase 1 clinical trial

Alberer, M., Gnad-Vogt, U., Hong, H. S., Mehr, K. T., Backert, L., Finak, G., Gottardo, R., Bica, M. A., Garofano, A., Koch, S. D., et al. (2017) · The Lancet

Rabies epidemiology and controlSARS-CoV-2 and COVID-19 Research

Cited by 530

Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments

McDavid, A., Finak, G., Chattopadyay, P. K., Dominguez, M., Lamoreaux, L., Ma, S. S., Roederer, M., & Gottardo, R. (2013) · Bioinformatics

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 395

Optimizing transformations for automated, high throughput analysis of flow cytometry data

Finak, G., Perez, J.-M., Weng, A., & Gottardo, R. (2010) · BMC Bioinformatics

Cell Image Analysis TechniquesSingle-cell and spatial transcriptomics

Cited by 99

Modeling Bi-modality Improves Characterization of Cell Cycle on Gene Expression in Single Cells

McDavid, A., Dennis, L., Danaher, P., Finak, G., Krouse, M., Wang, A., Webster, P., Beechem, J., & Gottardo, R. (2014) · PLoS Computational Biology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 58

The contribution of cell cycle to heterogeneity in single-cell RNA-seq data

McDavid, A., Finak, G., & Gottardo, R. (2016) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 57