Ziegenhain, Christoph

Comparative Analysis of Single-Cell RNA Sequencing Methods

Ziegenhain, C., Vieth, B., Parekh, S., Reinius, B., Guillaumet-Adkins, A., Smets, M., Leonhardt, H., Heyn, H., Hellmann, I., & Enard, W. (2017) · Molecular Cell

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 1,494

Single-cell RNA counting at allele and isoform resolution using Smart-seq3

Hagemann-Jensen, M., Ziegenhain, C., Chen, P., Ramsköld, D., Hendriks, G.-J., Larsson, A. J. M., Faridani, O. R., & Sandberg, R. (2020) · Nature Biotechnology

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 700

Benchmarking single-cell RNA-sequencing protocols for cell atlas projects

Mereu, E., Lafzi, A., Moutinho, C., Ziegenhain, C., McCarthy, D. J., Álvarez-Varela, A., Batlle, E., Sagar, Grün, D., Lau, J. K., et al. (2020) · Nature Biotechnology

Single-cell and spatial transcriptomicsGenomics and Phylogenetic Studies

Cited by 499

A systematic evaluation of single cell RNA-seq analysis pipelines

Vieth, B., Parekh, S., Ziegenhain, C., Enard, W., & Hellmann, I. (2019) · Nature Communications

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 265

powsimR: power analysis for bulk and single cell RNA-seq experiments

Vieth, B., Ziegenhain, C., Parekh, S., Enard, W., & Hellmann, I. (2017) · Bioinformatics

Single-cell and spatial transcriptomicsGene expression and cancer classification

Cited by 155

c-Rel gain in B cells drives germinal center reactions and autoantibody production

Kober-Hasslacher, M., Oh-Strauß, H., Kumar, D., Soberon, V., Diehl, C., Lech, M., Engleitner, T., Katab, E., Fernández-Sáiz, V., Piontek, G., et al. (2020) · Journal of Clinical Investigation

NF-κB Signaling PathwaysT-cell and B-cell Immunology

Cited by 24