Sugita, Yuji

Atg9 is a lipid scramblase that mediates autophagosomal membrane expansion

Matoba, K., Kotani, T., Tsutsumi, A., Tsuji, T., Mori, T., Noshiro, D., Sugita, Y., Nomura, N., Iwata, S., Ohsumi, Y., et al. (2020) · Nature Structural & Molecular Biology

Autophagy in Disease and TherapyCellular transport and secretion

Cited by 430

‘Scaling molecular dynamics beyond 100, 000 processor cores for large-scale biophysical simulations’

Jung, J., Nishima, W., Daniels, M., Bascom, G., Kobayashi, C., Adedoyin, A., Wall, M., Lappala, A., Phillips, D., Fischer, W., et al. (2019) · Journal of Computational Chemistry

Parallel Computing and Optimization TechniquesProtein Structure and Dynamics

Cited by 114

GENESIS CGDYN: large-scale coarse-grained MD simulation with dynamic load balancing for heterogeneous biomolecular systems

Jung, J., Tan, C., & Sugita, Y. (2023) · Nature Communications

Protein Structure and DynamicsAdvanced Physical and Chemical Molecular Interactions

Cited by 39

GENESIS CGDYN: large-scale coarse-grained MD simulation with dynamic load balancing for heterogeneous biomolecular systems

Sugita, Y., Jung, J., & Tan, C. (2023) · Nature Communications

Protein Structure and DynamicsAdvanced Physical and Chemical Molecular Interactions

Cited by 39

ColBuilder: Flexible structure generation of crosslinked collagen fibrils

Monego, D., Brosz, M., Buck, J., Viliuga, V., Jung, J., Stuehn, T., Schmies, M., Sugita, Y., & Gräter, F. (2024) · Bioinformatics

Collagen: Extraction and CharacterizationProtein Structure and Dynamics

Cited by 4