Kreisberg, Jason F.

Predicting drug response and synergy using a deep learning model of human cancer cells

Kuenzi, B. M., Park, J., Fong, S. H., Sanchez, K. S., Lee, J., Kreisberg, J. F., Ma, J., & Ideker, T. (2020) · Cancer Cell

Computational Drug Discovery MethodsMachine Learning in Healthcare

Cited by 544

Combinatorial CRISPR–Cas9 screens for de novo mapping of genetic interactions

Shen, J. P., Zhao, D., Sasik, R., Luebeck, J., Birmingham, A., Bojorquez-Gomez, A., Licon, K., Klepper, K., Pekin, D., Beckett, A. N., et al. (2017) · Nature Methods

CRISPR and Genetic EngineeringChromatin Remodeling and Cancer

Cited by 359

Systematic Evaluation of Molecular Networks for Discovery of Disease Genes

Huang, J. K., Carlin, D. E., Yu, M. K., Zhang, W., Kreisberg, J. F., Tamayo, P., & Ideker, T. (2018) · Cell Systems

Bioinformatics and Genomic NetworksBiomedical Text Mining and Ontologies

Cited by 289

Visible Machine Learning for Biomedicine

Yu, M. K., Ma, J., Fisher, J., Kreisberg, J. F., Raphael, B. J., & Ideker, T. (2018) · Cell

Machine Learning in HealthcareExplainable Artificial Intelligence (XAI)

Cited by 162

In Vitro Derived Dendritic Cells trans-Infect CD4 T Cells Primarily with Surface-Bound HIV-1 Virions

Cavrois, M., Neidleman, J., Kreisberg, J. F., & Greene, W. C. (2007) · PLoS Pathogens

HIV Research and TreatmentImmunotherapy and Immune Responses

Cited by 141

A multi-scale map of cell structure fusing protein images and interactions

Qin, Y., Huttlin, E. L., Winsnes, C. F., Gosztyla, M. L., Wacheul, L., Kelly, M. R., Blue, S. M., Zheng, F., Chen, M., Schaffer, L. V., et al. (2021) · Nature

Bioinformatics and Genomic NetworksAdvanced Proteomics Techniques and Applications

Cited by 82

Interpretation of cancer mutations using a multiscale map of protein systems

Zheng, F., Kelly, M. R., Ramms, D. J., Heintschel, M. L., Tao, K., Tutuncuoglu, B., Lee, J. J., Ono, K., Foussard, H., Chen, M., et al. (2021) · Science

Bioinformatics and Genomic NetworksCancer Genomics and Diagnostics

Cited by 81