Ergen, Can

Chemokine (C‐C motif) receptor 2–positive monocytes aggravate the early phase of acetaminophen‐induced acute liver injury

Mossanen, J. C., Krenkel, O., Ergen, C., Govaere, O., Liepelt, A., Puengel, T., Heymann, F., Kalthoff, S., Lefebvre, E., Eulberg, D., et al. (2016) · Hepatology

Drug-Induced Hepatotoxicity and ProtectionLiver physiology and pathology

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DestVI identifies continuums of cell types in spatial transcriptomics data

Lopez, R., Li, B., Keren-Shaul, H., Boyeau, P., Kedmi, M., Pilzer, D., Jelinski, A., Yofe, I., David, E., Wagner, A., et al. (2022) · Nature Biotechnology

Single-cell and spatial transcriptomicsGene expression and cancer classification

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Deep generative modeling of sample-level heterogeneity in single-cell genomics

Boyeau, P., Hong, J., Gayoso, A., Kim, M., McFaline-Figueroa, J. L., Jordan, M. I., Azizi, E., Ergen, C., & Yosef, N. (2025) · Nature Methods

Single-cell and spatial transcriptomicsGene Regulatory Network Analysis

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Liver fibrosis affects the targeting properties of drug delivery systems to macrophage subsets in vivo

Ergen, C., Niemietz, P. M., Heymann, F., Baues, M., Gremse, F., Pola, R., van Bloois, L., Storm, G., Kiessling, F., Trautwein, C., et al. (2019) · Biomaterials

Nanoparticle-Based Drug DeliveryLiver physiology and pathology

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