The DOI matches its Crossref record; 178 of the 178 references it cites were found in a registry or an index.
Explicitly representing soil microbial processes in Earth system models
Open accessAbstract
Microbes influence soil organic matter decomposition and the long‐term stabilization of carbon (C) in soils. We contend that by revising the representation of microbial processes and their interactions with the physicochemical soil environment, Earth system models (ESMs) will make more realistic global C cycle projections. Explicit representation of microbial processes presents considerable challenges due to the scale at which these processes occur. Thus, applying microbial theory in ESMs requires a framework to link micro‐scale process‐level understanding and measurements to macro‐scale models used to make decadal‐ to century‐long projections. Here we review the diversity, advantages, and pitfalls of simulating soil biogeochemical cycles using microbial‐explicit modeling approaches. We present a roadmap for how to begin building, applying, and evaluating reliable microbial‐explicit model formulations that can be applied in ESMs. Drawing from experience with traditional decomposition models, we suggest the following: (1) guidelines for common model parameters and output that can facilitate future model intercomparisons; (2) development of benchmarking and model‐data integration frameworks that can be used to effectively guide, inform, and evaluate model parameterizations with data from well‐curated repositories; and (3) the application of scaling methods to integrate microbial‐explicit soil biogeochemistry modules within ESMs. With contributions across scientific disciplines, we feel this roadmap can advance our fundamental understanding of soil biogeochemical dynamics and more realistically project likely soil C response to environmental change at global scales.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species
Farquhar, G. D., von Caemmerer, S., & Berry, J. A. (1980) · Planta · doi:10.1007/bf00386231 · Cited by 8,796
Temperature sensitivity of soil carbon decomposition and feedbacks to climate change
Davidson, E. A., & Janssens, I. A. (2006) · Nature · doi:10.1038/nature04514 · Cited by 6,919
Self-citationPersistence of soil organic matter as an ecosystem property
Schmidt, M. W. I., Torn, M. S., Abiven, S., Dittmar, T., Guggenberger, G., Janssens, I. A., Kleber, M., Kögel-Knabner, I., Lehmann, J., Manning, D. A. C., et al. (2011) · Nature · doi:10.1038/nature10386 · Cited by 6,057
TOWARD AN ECOLOGICAL CLASSIFICATION OF SOIL BACTERIA
Fierer, N., Bradford, M. A., & Jackson, R. B. (2007) · Ecology · doi:10.1890/05-1839 · Cited by 5,079
Elser, J. J., Bracken, M. E. S., Cleland, E. E., Gruner, D. S., Harpole, W. S., Hillebrand, H., Ngai, J. T., Seabloom, E. W., Shurin, J. B., & Smith, J. E. (2007) · Ecology Letters · doi:10.1111/j.1461-0248.2007.01113.x · Cited by 4,574
Energy Storage and the Balance of Producers and Decomposers in Ecological Systems
Olson, J. S. (1963) · Ecology · doi:10.2307/1932179 · Cited by 3,810
Analysis of Factors Controlling Soil Organic Matter Levels in Great Plains Grasslands
Parton, W. J., Schimel, D. S., Cole, C. V., & Ojima, D. S. (1987) · Soil Science Society of America Journal · doi:10.2136/sssaj1987.03615995005100050015x · Cited by 3,759
THE GROWTH OF BACTERIAL CULTURES
Monod, J. (1949) · Annual Review of Microbiology · doi:10.1146/annurev.mi.03.100149.002103 · Cited by 3,707
Cotrufo, M. F., Wallenstein, M. D., Boot, C. M., Denef, K., & Paul, E. (2013) · Global Change Biology · doi:10.1111/gcb.12113 · Cited by 3,552
NITROGEN LIMITATION OF NET PRIMARY PRODUCTIVITY IN TERRESTRIAL ECOSYSTEMS IS GLOBALLY DISTRIBUTED
LeBauer, D. S., & Treseder, K. K. (2008) · Ecology · doi:10.1890/06-2057.1 · Cited by 2,766
Cited by
Lavallee, J. M., Soong, J. L., & Cotrufo, M. F. (2020) · Global Change Biology · doi:10.1111/gcb.14859 · Cited by 2,477
Global stocks and capacity of mineral-associated soil organic carbon
Georgiou, K., Jackson, R. B., Vindušková, O., Abramoff, R. Z., Ahlström, A., Feng, W., Harden, J. W., Pellegrini, A. F. A., Polley, H. W., Soong, J. L., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-31540-9 · Cited by 979
Self-citationLand use driven change in soil pH affects microbial carbon cycling processes
Malik, A. A., Puissant, J., Buckeridge, K. M., Goodall, T., Jehmlich, N., Chowdhury, S., Gweon, H. S., Peyton, J. M., Mason, K. E., van Agtmaal, M., et al. (2018) · Nature Communications · doi:10.1038/s41467-018-05980-1 · Cited by 958
Toward more realistic projections of soil carbon dynamics by Earth system models
Luo, Y., Ahlström, A., Allison, S. D., Batjes, N. H., Brovkin, V., Carvalhais, N., Chappell, A., Ciais, P., Davidson, E. A., Finzi, A., et al. (2016) · Global Biogeochemical Cycles · doi:10.1002/2015gb005239 · Cited by 533
Self-citationSoil carbon saturation: what do we really know?
Georgiou, K., Angers, D., Champiny, R. E., Cotrufo, M. F., Craig, M. E., Doetterl, S., Grandy, A. S., Lavallee, J. M., Lin, Y., Lugato, E., et al. (2025) · Global Change Biology · doi:10.1111/gcb.70197 · Cited by 153
Self-citation
Metadata
- Authors
- Wieder, W. R., Allison, S. D., Davidson, E. A., Georgiou, K., Hararuk, O., He, Y., Hopkins, F., Luo, Y., Smith, M. J., Sulman, B., Todd‐Brown, K., Wang, Y., Xia, J., & Xu, X.
- Venue
- Global Biogeochemical Cycles
- Publisher
- American Geophysical Union (AGU)
- Published
- 2015-10
- Volume
- 29
- Issue
- 10
- Pages
- 1782-1800
- ISSN
- 0886-6236 (ISSN-L)
- 1944-9224
- OpenAlex
- W1952580789
- Cited by
- 411
- References
- 178
- FWCI
- 29.15
- Type
- journal article
- Language
- en
- Open access
- bronze
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Explicitly representing soil microbial processes in Earth system models. https://app.cochat.ai/papers/10.1002/2015gb005188
- The paper
- Wieder, W. R., Allison, S. D., Davidson, E. A., Georgiou, K., Hararuk, O., He, Y., Hopkins, F., Luo, Y., Smith, M. J., Sulman, B., Todd‐Brown, K., Wang, Y., Xia, J., & Xu, X. (2015). Explicitly representing soil microbial processes in Earth system models. Global Biogeochemical Cycles. https://doi.org/10.1002/2015gb005188
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.