Transcriptional profiling of microglia; current state of the art and future perspectives

Cited by (142)

Items 101–142 of 142

1. Microglial senescence and epigenetic reprogramming in alzheimer's disease: An immunometabolic perspective
   Jinye Ma, Baiqi Yang, Xuefan Jiang, Luping Wang, Wei Wei, Yu Cao, Hao Li · 2026 · Experimental Gerontology
2. Cyclic Multiplex Fluorescent Immunohistochemistry Protocol to Phenotype Glial Cells in Formalin-Fixed Paraffin-Embedded Human Brain Sections
   Clara Muñoz‐Castro, Ayush Noori, Bradley T. Hyman, Alberto Serrano‐Pozo · 2022 · Methods in molecular biology
3. Microglia and Psychiatric Disorders
   Amalie C. M. Couch, Anthony Christopher Vernon · 2021 · Springer eBooks
4. The human microglia responsome: a resource to better understand microglia states in health and disease
   Gijsje J. L. Snijders, Kátia de Paiva Lopes, Marjolein A. M. Sneeboer, Benjamin Z. Muller, Frederieke A. J. Gigase, Ricardo A. Vialle, Roy D. Missall, Raphael Kübler, Towfique Raj, Jack Humphrey et al. · 2023 · Research Square
5. Novel In Vitro Culture of Microglia from Aged Mice: Implications for the Future of Aging Neurobiology Research
   Katie L. Reagin, Rae‐Ling Lee, Kristen E. Funk · 2025 · Current Protocols
6. ACSA2 is not astrocyte-specific: implications for cell sorting strategies in the rodent brain
   E Daniele, Gabriel Khelifi, Daniel Beretta, Boyan K. Tsankov, K.W. Annie Bang, Chiara Beretta, Dana J. Philpott, Samer M. I. Hussein, Maryam Faiz · 2026 · Frontiers in Cellular Neuroscience
7. Multiscale Approximations to Understand the Complex Role of Microglia in Alzheimer's Disease
   Patricia Martínez-Tazo, Marina Mejias‐Ortega, Verónica López-López, Aysha María Bhojwani-Cabrera, Emma Saxton, Santiago Canals, Giles E. Hardingham, Antonia Gutiérrez, José P. López‐Atalaya, Silvia De Santis · 2026 · European Journal of Neuroscience
8. Chronic central-targeted Interleukin-6 overexpression promotes hippocampal and cortical neuropathology in the Tg2576 mouse model of Alzheimer’s disease
   Carla Canal, Kevin Aguilar, Gemma Comes, Elisenda Sanz, Mercedes Giralt, Paula Sanchís, Juan Hidalgo · 2026 · Alzheimer s Research & Therapy
9. Assessment of microglial responsiveness after irradiation in mouse organotypic hippocampus or patient-derived tissue cultures
   Bahar Djouiai, Felicitas Rapp, Franziska Köhler, Frank Gaunitz, Steffen Klaus Rosahl, Rüdiger Gerlach, Faramarz Dehghani, Ingo Bechmann, Katharina Heß, Karsten Winter et al. · 2026 · Methods in cell biology
10. A unified rodent atlas reveals the cellular complexity and evolutionary divergence of the dorsal vagal complex
    Cecilia Hes, Abigail J. Tomlinson, Lieke Michielsen, Hunter J Murdoch, Fatemeh Soltani, Maia V. Kokoeva, Paul V. Sabatini · 2025 · eLife
11. Human olfactory neuronal cells through nasal biopsy: molecular characterization and utility in brain science
    Kun Yang, Koko Ishizuka, Andrew P. Lane, Zui C. Narita, Arisa Hayashida, Yukiko Y. Lema, Emma Heffron, Haydn Loudd, Maeve Schumacher, Shin‐ichi Kano et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
12. Single-nucleus RNA velocity reveals synaptic and cell-cycle dysregulations missed by gene expression in neuropathologic Alzheimer disease
    Quadri Adewale, Ahmed Faraz Khan, David A. A Bennett, Yasser Iturria‐Medina · 2022 · medRxiv
13. A single-cell transcriptomic atlas reveals resident dendritic-like cells in the zebrafish brain parenchyma
    Mireia Rovira, Giuliano Ferrero, Magali Miserocchi, Alice Montanari, Valérie Wittamer · 2024 · eLife
14. A unified rodent atlas reveals the cellular complexity and evolutionary divergence of the dorsal vagal complex
    Cecilia Hes, Abigail J. Tomlinson, Lieke Michielsen, Hunter J Murdoch, Fatemeh Soltani, Maia V. Kokoeva, Paul V. Sabatini · 2025 · eLife
15. KOLF2.1J iTF-Microglia: A standardized platform to study microglial transcriptional regulatory networks in CNS disease
    Iván Rodríguez-Nunez, Samuel C. Bartley, Jared W. Taylor, S. Quinn Johnston, Brianne B. Rogers, Sarah Kristen Meadows, Kimberly M. Newberry, J. Nicholas Cochran, R Myers · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
16. Chronic stress abnormalize microglial-vascular interaction via AT1R signaling and microglia activation to drive depression-like behaviors
    Hang Gao, Zeyuan Ding, Biao Xu, Yuqing Wu, Meizhen Zhu, Xiaoyue Zhang, Fujian Qi, Junru Liu, Quan Fang, Yanli Ran · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
17. Cellular senescence in the ageing brain
    Nynke Talma · 2022
18. Cell-associated Transcriptional Alterations in the Retinal of Alzheimer’s Disease
    Jennifer Ngolab, Adam Mark, Justin Buchanan, Shaina Korouri, Sebastian Priessl, Sara Brin Rosenthal, Allen Wang, Kathleen M Fisch, Robert A. Rissman · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
19. Sexual dimorphism in the social behaviour of Cntnap2 KO mice correlates with disrupted synaptic connectivity and increased microglial activity in the anterior cingulate cortex of males
    Matt S. Dawson, Kevin Gordon-Fleet, Lingxin Yan, Vera Tardos, Huanying He, Kwong Mui, Smriti Nawani, Zeinab Asgarian, Marco Catani, Cathy Fernandes et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
20. Clustering analysis of microglial subpopulations in midbrain of Parkinson’s disease patients
    Bei LIU, Jiali He, Ziyan Wang, Xiang HUANG, Jing Hu, Hao QIAN · 2023 · Scientia Sinica Vitae
21. Heterogeneity Analysis of Glioblastoma Tumor Cell Population Based on Single-Cell Rna Sequencing Data Analysis
    Jason Huajue Yang, Eena Cheng · 2023 · International Conference on Bioscience, Biochemistry and Bioinformatics (ICBBB)
22. Additional file 2 of Ambient RNAs removal of cortex-specific snRNA-seq reveals Apoe+ microglia/macrophage after deeper cerebral hypoperfusion in mice
    Yuan Zhang, Jinyun Tan, Kai Yang, Weijian Fan, Bo Yu, Weihao Shi · 2023 · Figshare
23. Additional file 7 of Systemic administration of β-glucan induces immune training in microglia
    Yang Heng, Xiaoming Zhang, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Leo A. B. Joosten, Mihai Gheorghe Netea, Erik Boddeke, Jon D. Laman et al. · 2021 · Figshare
24. Additional file 4 of Systemic administration of β-glucan induces immune training in microglia
    Yang Heng, Xiaomin Zhang, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Leo A. B. Joosten, Mihai Gheorghe Netea, Erik Boddeke, Jon D. Laman et al. · 2021 · Figshare
25. A unified rodent atlas reveals the cellular complexity and evolutionary divergence of the dorsal vagal complex
    Cecilia Hes, Abigail J. Tomlinson, Lieke Michielsen, Hunter J Murdoch, Fatemeh Soltani, Maia V. Kokoeva, Paul V. Sabatini · 2025 · eLife
26. A single-cell transcriptomic atlas reveals resident dendritic-like cells in the zebrafish brain parenchyma
    Mireia Rovira, Giuliano Ferrero, Magali Miserocchi, Alice Montanari, Ruben Lattuca, Valérie Wittamer · 2025 · eLife
27. Interactome and expression profile of class II transactivator (CIITA) in lipopolysaccharides mediated neuroinflammation: A combined network analysis and zebrafish model study
    Kishore Nagasubramanian · 2025 · In Silico Research in Biomedicine
28. Additional file 1 of Systemic administration of β-glucan induces immune training in microglia
    Heng, Yang, Zhang, Xiaoming, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Joosten, Leo A. B., Netea, Mihai G., Erik Boddeke, Laman, Jon D. et al. · 2021 · Figshare
29. Additional file 5 of Systemic administration of β-glucan induces immune training in microglia
    Yang Heng, Zhang, Xiaoming, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Joosten, Leo A. B., Netea, Mihai G., Erik Boddeke, Laman, Jon D. et al. · 2021 · Figshare
30. Additional file 1 of Differential contribution of THIK-1 K+ channels and P2X7 receptors to ATP-mediated neuroinflammation by human microglia
    Ali Rifat, Bernardino Ossola, Roland W. Bürli, Lee A. Dawson, Nicola Brice, Anna Rowland, Marina Lizio, Xiao Xu, Keith J. Page, Pawel Fidzinski et al. · 2024 · Figshare
31. Additional file 6 of Systemic administration of β-glucan induces immune training in microglia
    Yang Heng, Zhang, Xiaoming, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Joosten, Leo A. B., Netea, Mihai G., Erik Boddeke, Laman, Jon D. et al. · 2021 · Figshare
32. Additional file 2 of Differential contribution of THIK-1 K+ channels and P2X7 receptors to ATP-mediated neuroinflammation by human microglia
    Ali Rifat, Bernardino Ossola, Roland W. Bürli, Lee A. Dawson, Nicola Brice, Anna Rowland, Marina Lizio, Xiao Xu, Keith J. Page, Pawel Fidzinski et al. · 2024 · Figshare
33. Additional file 1 of Ambient RNAs removal of cortex-specific snRNA-seq reveals Apoe+ microglia/macrophage after deeper cerebral hypoperfusion in mice
    Zhang, Yuan, Tan, Jinyun, Yang, Kai, Fan, Weijian, Yu, Bo, Shi, Weihao · 2023 · Figshare
34. Additional file 3 of Systemic administration of β-glucan induces immune training in microglia
    Heng, Yang, Zhang, Xiaoming, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Joosten, Leo A. B., Netea, Mihai G., Erik Boddeke, Laman, Jon D. et al. · 2021 · Figshare
35. Additional file 8 of Systemic administration of β-glucan induces immune training in microglia
    Heng, Yang, Zhang, Xiaoming, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Joosten, Leo A. B., Netea, Mihai G., Erik Boddeke, Laman, Jon D. et al. · 2021 · Figshare
36. Additional file 2 of Systemic administration of β-glucan induces immune training in microglia
    Yang Heng, Zhang, Xiaoming, Malte Borggrewe, Hilmar R. J. van Weering, Maaike L. Brummer, Tjalling W. Nijboer, Joosten, Leo A. B., Netea, Mihai G., Erik Boddeke, Laman, Jon D. et al. · 2021 · Figshare
37. Characterization of IFN-γ-mediated cellular responses in the HMC3 cell line
    E Franck, Jasmyne A. Storm, Jueqin Lu, Mon Francis Obtial, Sanoji Wijenayake · 2026 · Biochemistry and Cell Biology
38. KOLF2.1J iTF-Microglia: A standardized platform to study microglial transcriptional regulatory networks in CNS disease
    Brianne B. Rogers, Ashlyn G. Anderson, Iván Rodríguez-Nunez, Samuel C. Bartley, S. Quinn Johnston, Jared W. Taylor, Sarah Kristen Meadows, Kimberly M. Newberry, R Myers, J. Nicholas Cochran · 2026 · iScience
39. Multimodal characterization of age-dependent neurovascular phenotypes in Notch3R170C CADASIL mice by ultra-high-field MRI and histological analyses
    Jie Yang, Shan Tian, Yuna Li, Yuan Qiao, Chaohua Cong, Li Zhang, Jingjing Su, Weibin Wu · 2026 · Brain Research Bulletin
40. Hematopoietic Growth Factors Induce More Extensive Transcriptomic Remodeling in Cerebral Monocytes/Macrophages than in Microglia During the Chronic Phase of Traumatic Brain Injury
    Sushil Gaire, Robert S. Gardner, Michele M. Kyle, Xuecheng Qiu, William Miller, Lawrence S. Chin, Li‐Ru Zhao · 2026 · Molecular Neurobiology
41. Distinct Transposable Element Transcript Patterns in Microglia Across Aging and Alzheimer's Disease
    Randy A. Grant, Rachel L. Doser, Thomas J. LaRocca · 2026 · Aging Cell
42. Human Stem Cell-Derived Models of the Alzheimer’s Disease Neuroimmune System
    Rose Summers, Daphne Quang, Noah R. Johnson · 2026 · International Journal of Molecular Sciences