ProSight Lite: Graphical software to analyze top‐down mass spectrometry data

Cited by (247)

Items 101–200 of 247

1. High resolution top-down experimental strategies on the Orbitrap platform
   Kai Scheffler, Rosa Viner, Eugen Damoc · 2017 · Journal of Proteomics
2. Native Electron Capture Dissociation Maps to Iron-Binding Channels in Horse Spleen Ferritin
   Owen S. Skinner, Michael O. McAnally, Richard P. Van Duyne, George Chappell Schatz, Kathrin Breuker, Philip Daniel Compton, Neil L. Kelleher · 2017 · Analytical Chemistry
3. Isotope Depletion Mass Spectrometry (ID-MS) for Accurate Mass Determination and Improved Top-Down Sequence Coverage of Intact Proteins
   Kelly J. Gallagher, Michael Palasser, Sam Hughes, C. Logan Mackay, David P. A. Kilgour, David J. Clarke · 2020 · Journal of the American Society for Mass Spectrometry
4. Analysis of Viral Spike Protein N-Glycosylation Using Ultraviolet Photodissociation Mass Spectrometry
   Edwin E. Escobar, Shuaishuai Wang, Rupanjan Goswami, Michael B. Lanzillotti, Lei Li, Jason S. McLellan, Jennifer S. Brodbelt · 2022 · Analytical Chemistry
5. Recent advances in structural mass spectrometry methods in the context of biosimilarity assessment: from sequence heterogeneities to higher order structures
   J.-G. Castel, Sarah Delaux, Oscar Hernandez‐Alba, Sarah Cianférani · 2023 · Journal of Pharmaceutical and Biomedical Analysis
6. Advances in mass spectrometry-based approaches for characterizing monoclonal antibodies: resolving structural complexity and analytical challenges
   Abhik Mojumdar, Hee-Jin Yoo, Duck‐Hyun Kim, Ji‐Won Park, Sujin Park, Eunji Jeon, Sunhee Choi, Jung Hoon Choi, Moonhee Park, Geul Bang et al. · 2024 · Journal of Analytical Science & Technology
7. Mass Spectrometry-Based Top-Down Proteomics for Proteoform Profiling of Protein Corona
   S. Sadeghi, Fei Fang, Reyhane Tabatabaeian Nimavard, Qian-Yi Wang, Guijie Zhu, A. Saei, Liang-Liang Sun, M. Mahmoudi · 2025 · Nature Protocols
8. Pilot Study for Deciphering Post-Translational Modifications and Proteoforms of Tau Protein by Capillary Electrophoresis-Mass Spectrometry
   Fei Fang, Tian Xu, Hsiao‐Tien Chien Hagar, Stacy Hovde, Min‐Hao Kuo, Liangliang Sun · 2024 · Journal of Proteome Research
9. Quantitative Top-down Proteomics Revealed Kinase Inhibitor-induced Proteoform-level Changes in Cancer Cells
   Trishika Chowdhury, Kellye A. Cupp-Sutton, Yanting Guo, Kevin Gao, Zhi-Tao Zhao, Anthony W. G. Burgett, Si Wu · 2024 · Journal of Proteome Research
10. Multidimensional Top-Down Proteomics of Brain Region-Specific Mouse Brain Proteoforms Responsive to Cocaine and Estradiol
    Hae-Min Park, R. Satta, Roderick G Davis, Y. Goo, Richard D. LeDuc, Ryan T. Fellers, Joseph B. Greer, E. V. Romanova, S. Rubakhin, Rex Tai et al. · 2019 · Journal of Proteome Research
11. Optical Fiber-Enabled Photoactivation of Peptides and Proteins
    Trenton M. Peters-Clarke, Kevin L. Schauer, N. Riley, J. Lodge, M. Westphall, J. Coon · 2020 · Analytical Chemistry
12. Native mass spectrometry analyses of chaperonin complex TRiC/CCT reveal subunit N-terminal processing and re-association patterns
    Miranda P. Collier, Karen E. Moreira, Kathy H. Li, Yuchan Chen, Daniel N. Itzhak, Rahul S. Samant, Alexander Leitner, Alma L. Burlingame, Judith Frydman · 2021 · Scientific Reports
13. Revving an Engine of Human Metabolism: Activity Enhancement of Triosephosphate Isomerase via Hemi-Phosphorylation
    Luis F. Schachner, B. D. Soye, S. Ro, Grace E Kenney, Ashley N. Ives, Taojunfeng Su, Y. Goo, Michael C. Jewett, A. Rosenzweig, N. Kelleher · 2022 · ACS Chemical Biology
14. Ultrahigh Resolution Ion Isolation by Stored Waveform Inverse Fourier Transform 21 T Fourier Transform Ion Cyclotron Resonance Mass Spectrometry.
    Donald F. Smith, Greg T. Blakney, S. Beu, Lissa C. Anderson, Chad R. Weisbrod, C. Hendrickson · 2020 · Analytical Chemistry
15. MS-TAFI: A Tool for the Analysis of Fragment Ions Generated from Intact Proteins
    Kyle J. Juetten, Jennifer S. Brodbelt · 2022 · Journal of Proteome Research
16. Coupling 193 nm Ultraviolet Photodissociation and Ion Mobility for Sequence Characterization of Conformationally-Selected Peptides
    Alyssa Q. Stiving, Sophie R. Harvey, Benjamin J. Jones, Bruno Bellina, Jeffery M. Brown, Perdita E. Barran, Vicki Hopper Wysocki · 2020 · Journal of the American Society for Mass Spectrometry
17. Optimization of Higher-Energy Collisional Dissociation Fragmentation Energy for Intact Protein-Level Tandem Mass Tag Labeling
    Yanting Guo, Trishika Chowdhury, Meena Seshadri, Kellye A. Cupp‐Sutton, Qingyu Wang, Dahang Yu, Si Wu · 2023 · Journal of Proteome Research
18. Fundamentals and Advances of Orbitrap Mass Spectrometry
    Michaela Ščigelová, Alexander Makarov · 2000 · Wiley eBooks
19. Establishing a Top-Down Proteomics Platform on a Time-of-Flight Instrument with Electron-Activated Dissociation
    Richard M. Searfoss, Emily Zahn, Zong-Tao Lin, Benjamin A. Garcia · 2025 · Journal of Proteome Research
20. Ubiquitin Conjugation Probed by Inflammation in Myeloid-Derived Suppressor Cell Extracellular Vesicles
    Katherine R. Adams, Sitara Chauhan, Divya B. Patel, Virginia K. Clements, Yan Wang, Steven M. Jay, Nathan J Edwards, Suzanne Ostrand‐Rosenberg, Catherine Fenselau · 2017 · Journal of Proteome Research
21. Protein de novo sequencing by top-down and middle-down MS/MS: Limitations imposed by mass measurement accuracy and gaps in sequence coverage
    Lidong He, Chad R. Weisbrod, Alan G. Marshall · 2017 · International Journal of Mass Spectrometry
22. Deconvolution in mass spectrometry based proteomics
    Xu Guang, Jacek Stupak, Yang Li, Luokai Hu, Bo Guo, Jianjun Li · 2018 · Rapid Communications in Mass Spectrometry
23. Proteomic and direct analysis in real time mass spectrometry analysis of a Native American ceremonial hat
    Timothy P. Cleland, G. Asher Newsome, R. Eric Hollinger · 2019 · The Analyst
24. Insights on the Conformational Ensemble of Cyt C Reveal a Compact State during Peroxidase Activity
    Emily E. Chea, Daniel Joseph Deredge, Lisa M. Jones · 2019 · Biophysical Journal
25. Gas-phase ion/ion chemistry for structurally sensitive probes of gaseous protein ion structure: Electrostatic and electrostatic to covalent cross-linking
    Melanie Cheung See Kit, Verônica V. Carvalho, Jonah Z. Vilseck, Ian Webb · 2021 · International Journal of Mass Spectrometry
26. Structural Characterization of Carbonic Anhydrase–Arylsulfonamide Complexes Using Ultraviolet Photodissociation Mass Spectrometry
    Inês C. Santos, Jennifer S. Brodbelt · 2021 · Journal of the American Society for Mass Spectrometry
27. Rapid MRSA detection via tandem mass spectrometry of the intact 80 kDa PBP2a resistance protein
    Jason R. Neil, Arvind Verma, Scott R. Kronewitter, William M. McGee, Christopher Mullen, Marjaana Viirtola, Annika Kotovuori, Herdis Friedrich, Johan Finell, Joni Rannisto et al. · 2021 · Scientific Reports
28. Implementing Digital-Waveform Technology for Extended m/z Range Operation on a Native Dual-Quadrupole FT-IM-Orbitrap Mass Spectrometer
    Jacob W. McCabe, Benjamin J. Jones, Thomas E. Walker, Robert L. Schrader, Adam P. Huntley, Jixing Lyu, Nathan M. Hoffman, Gordon Anderson, Peter T. A. Reilly, Arthur D. Laganowsky et al. · 2021 · Journal of the American Society for Mass Spectrometry
29. A multiparameter optimization in middle‐down analysis of monoclonal antibodies by LC–MS/MS
    Jonathan Dhenin, Mathieu Dupré, Karen Druart, Alain Krick, Christine Mauriac, Julia Chamot‐Rooke · 2023 · Journal of Mass Spectrometry
30. Reassembling protein complexes after controlled disassembly by top-down mass spectrometry in native mode
    Luis F. Schachner, Denise P. Tran, Alexander S. Lee, John P. McGee, Kevin Jooß, Kenneth R. Durbin, Henrique S. Seckler, Lauren M. Adams, Erika N. Cline, Rafael Donadelli Melani et al. · 2021 · International Journal of Mass Spectrometry
31. Improved Sequence Analysis of Intact Proteins by Parallel Ion Parking during Electron Transfer Dissociation
    Elizabeth M. Duselis, Maria C. Panepinto, John E. P. Syka, Christopher Mullen, Robert A. D’Ippolito, A. Michelle English, Scott A. Ugrin, Jeffrey Shabanowitz, Donald F. Hunt · 2021 · Analytical Chemistry
32. Top-Down Analysis of Branched Proteins Using Mass Spectrometry
    Chen, Dapeng, Gomes, Fabio, Abeykoon, Dulith, Lemma, Betsegaw, Wang, Yan, Fushman, David, Fenselau, Catherine · 2018 · Analytical Chemistry
33. Proteomics: Tools of the Trade
    Utpal Bose, Gene L. Wijffels, Crispin A. Howitt, Michelle Lisa Colgrave · 2019 · Advances in experimental medicine and biology
34. IMTBX and Grppr: Software for Top-Down Proteomics Utilizing Ion Mobility-Mass Spectrometry
    Dmitry M. Avtonomov, Daniel A. Polasky, Brandon T. Ruotolo, Alexey I. Nesvizhskii · 2017 · Analytical Chemistry
35. Characterization of Structural Hemoglobin Variants by Top-Down Mass Spectrometry and R Programming Tools for Rapid Identification
    Yuan Lin, Archana M. Agarwal, Alan G. Marshall, Lissa C. Anderson · 2021 · Journal of the American Society for Mass Spectrometry
36. Determining the Location of the α-Synuclein Dimer Interface Using Native Top-Down Fragmentation and Isotope Depletion-Mass Spectrometry
    Kiani Jeacock, Alexandre Chappard, Kelly J. Gallagher, C. Logan Mackay, David P. A. Kilgour, Mathew H. Horrocks, Tilo Kunath, David J. Clarke · 2023 · Journal of the American Society for Mass Spectrometry
37. Characterizing age-related changes in intact mitochondrial proteoforms in murine hearts using quantitative top-down proteomics
    Andrea Ramírez‐Sagredo, Anju Teresa Sunny, Kellye A. Cupp‐Sutton, Trishika Chowdhury, Zhitao Zhao, Si Wu, Ying Ann Chiao · 2024 · Clinical Proteomics
38. Application of Multiple Length Cross-linkers to the Characterization of Gaseous Protein Structure
    Melanie Cheung See Kit, Ian Webb · 2022 · Analytical Chemistry
39. Analysis of Isotopically Depleted Proteins Derived from Escherichia coli and Caenorhabditis elegans Cell Lines by Liquid Chromatography 21 T Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry
    Zeljka Popovic, Lissa C. Anderson, Xuepei Zhang, David Stephen Butcher, Greg T. Blakney, Roman A. Zubarev, Alan G. Marshall · 2023 · Journal of the American Society for Mass Spectrometry
40. Maximizing Selective Cleavages at Aspartic Acid and Proline Residues for the Identification of Intact Proteins
    David J. Foreman, E. Dziekonski, S. McLuckey · 2018 · Journal of the American Society for Mass Spectrometry
41. Towards middle-up analysis of polyclonal antibodies: subclass-specific N-glycosylation profiling of murine immunoglobulin G (IgG) by means of HPLC-MS
    Constantin Blöchl, Christof Regl, Christian G. Huber, Petra Winter, Richard Weiss, Therese Wohlschlager · 2020 · Scientific Reports
42. Mapping paratopes of nanobodies using native mass spectrometry and ultraviolet photodissociation
    Luis A. Macias, Xun Wang, Bryan W. Davies, Jennifer S. Brodbelt · 2022 · Chemical Science
43. Characterization of Phosphorylated Peptides by Electron-Activated and Ultraviolet Dissociation Mass Spectrometry: A Comparative Study with Collision-Induced Dissociation
    Marion Girod, Delphine Arquier, Amanda Helms, Kyle J. Juetten, Jennifer S. Brodbelt, Jérôme Lemoine, Luke MacAleese · 2024 · Journal of the American Society for Mass Spectrometry
44. A Universal Spectrum Annotator for Complex Peptidoforms in Mass Spectrometry-Based Proteomics
    Douwe Schulte, Rien W. Leuvenink, Shelley Jager, Albert J. R. Heck, Joost Snijder · 2025 · Analytical Chemistry
45. Online protein unfolding characterized by ion mobility electron capture dissociation mass spectrometry: cytochrome C from neutral and acidic solutions
    Rebecca L. Cain, Ian Webb · 2023 · Analytical and Bioanalytical Chemistry
46. All Ion Differential Analysis Refines the Detection of Terminal and Internal Diagnostic Fragment Ions for the Characterization of Biologics Product-Related Variants and Impurities by Middle-down Mass Spectrometry
    François Griaud, Blandine Denefeld, Chi‐Ya Kao‐Scharf, Jérôme Dayer, Manuel Lang, Jianyou Chen, Matthias Berg · 2019 · Analytical Chemistry
47. Elucidating Proteoform Dynamics Underlying the Senescence Associated Secretory Phenotype
    Peter Francis Doubleday, Luca Fornelli, Neil L. Kelleher · 2020 · Journal of Proteome Research
48. Center of Mass Calculation in Combination with MS/MS Allows Robust Identification of Single Amino Acid Polymorphisms in Clinical Measurements of Insulin-Like Growth Factor-1
    Anthony D. Maus, Jennifer V. Kemp, Dragana Milosevic, Santosh Renuse, Akhilesh Pandey, Ravinder Jit Singh, Stefan K. G. Grebe · 2019 · Journal of Proteome Research
49. Capturing RAS oligomerization on a membrane
    Sangho D. Yun, Elena Scott, Jing‐Yuan Chang, Hanieh Bahramimoghaddam, Michael Lynn, Carter Lantz, David H. Russell, Arthur D. Laganowsky · 2024 · Proceedings of the National Academy of Sciences
50. Increased Single-Spectrum Top-Down Protein Sequence Coverage in Trapping Mass Spectrometers with Chimeric Ion Loading
    Chad R. Weisbrod, Lissa C. Anderson, Joseph B. Greer, Caroline J. DeHart, Christopher L. Hendrickson · 2020 · Analytical Chemistry
51. Preparing to read the ubiquitin code: characterization of ubiquitin trimers by top‐down mass spectrometry
    Amanda E. Lee, Lucía Geis‐Asteggiante, Emma K. Dixon, Yeji Kim, Tanuja R. Kashyap, Yan Wang, David Fushman, Catherine Fenselau · 2016 · Journal of Mass Spectrometry
52. Conodipine-P1-3, the First Phospholipases A2 Characterized from Injected Cone Snail Venom*
    Carolina Möller, W. Clay Davis, Evan Clark, Anthony P. DeCaprio, Frank Marí · 2019 · Molecular & Cellular Proteomics
53. Protamine Characterization by Top-Down Proteomics: Boosting Proteoform Identification with DBSCAN
    Gianluca Arauz‐Garofalo, Meritxell Jodar, Mar Vilanova, Alberto de la Iglesia, Judit Castillo, Ada Soler‐Ventura, Rafael Oliva, Marta Vilaseca, Marina Gay · 2021 · Proteomes
54. Preparing to read the ubiquitin code: top‐down analysis of unanchored ubiquitin tetramers
    Amanda E. Lee, Lucía Geis‐Asteggiante, Emma K. Dixon, M. Barry Miller, Yan Wang, David Fushman, Catherine Fenselau · 2016 · Journal of Mass Spectrometry
55. A High-Throughput Workflow for Mass Spectrometry Analysis of Nucleic Acids by Nanoflow Desalting
    Michael B. Lanzillotti, Jennifer S. Brodbelt · 2024 · Analytical Chemistry
56. A Top-Down Proteomic Assay to Evaluate KRAS4B-Compound Engagement
    R. D'Ippolito, Dana Rabara, Maria Abreu Blanco, Emily O. Alberico, Matthew R. Drew, Nitya Ramakrishnan, Dara Sontan, Stephanie R. T. Widmeyer, Grace M Scheidemantle, S. Messing et al. · 2024 · Analytical Chemistry
57. A Conformation-Specific Approach to Native Top-down Mass Spectrometry
    Hannah M. Britt, Aisha Ben-Younis, Nathanael Page, Konstantinos Thalassinos · 2024 · Journal of the American Society for Mass Spectrometry
58. A year (2014–2015) of plants in Proteomics journal. Progress in wet and dry methodologies, moving from protein catalogs, and the view of classic plant biochemists
    Rosa Sánchez‐Lucas, Ângela Mehta, Luís Valledor, Francisco Cabello‐Hurtado, María Cristina Romero-Rodríguez, Lyudmila Simova‐Stoilova, Sekvan Demir, Luis E. Rodriguez‐de‐Francisco, Ana María Maldonado-Alconada, Ana L. Jorrin‐Prieto et al. · 2015 · PROTEOMICS
59. The redox-sensitive R-loop of the carbon control protein SbtB contributes to the regulation of the cyanobacterial CCM
    Oliver Mantovani, Michael C. Haffner, Peter Walke, Abdalla A. Elshereef, Berenike C. Wagner, Daniel Petras, Karl Forchhammer, Khaled A. Selim, Martin Hagemann · 2024 · Scientific Reports
60. Precise Characterization of KRAS4B Proteoforms by Combining Immunoprecipitation with Top-Down Mass Spectrometry
    Lauren M. Adams, Caroline J. DeHart, Neil L. Kelleher · 2021 · Methods in molecular biology
61. Top-down proteomics: applications, recent developments and perspectives
    Annapurna Pamreddy, Nagender Reddy Panyala · 2016 · Journal of Applied Bioanalysis
62. Native Top–Down Analysis of Membrane Protein Complexes Directly From In Vitro and Native Membranes
    Wonhyeuk Jung, Aniruddha Panda, Jaywon Lee, Snehasish Ghosh, Jared Shaw, Kallol Gupta · 2025 · Molecular & Cellular Proteomics
63. Quantitative Native Proteomics by Capillary Zone Electrophoresis-Mass Spectrometry
    Fei Fang, Liangliang Sun · 2025 · Analytical Chemistry
64. Quantifying Positional Isomers (QPI) by Top-Down Mass Spectrometry
    Andrea M. Brunner, Philip Lössl, Paul P. Geurink, Huib Ovaa, Pascal Albanese, Maarten A. F. Altelaar, Albert J. R. Heck, Richard A. Scheltema · 2021 · Molecular & Cellular Proteomics
65. FAST MS: Software for the Automated Analysis of Top-Down Mass Spectra of Polymeric Molecules Including RNA, DNA, and Proteins
    Michael Palasser, Kathrin Breuker · 2024 · Journal of the American Society for Mass Spectrometry
66. Influence of carboxylation on osteocalcin detection by mass spectrometry
    Timothy P. Cleland, Corinne J. Thomas, Caren M. Gundberg, Deepak Vashishth · 2016 · Rapid Communications in Mass Spectrometry
67. Top-down analysis of disulfide-linked proteins using photoinduced radical reactions and ET-DDC
    Sarju Adhikari, Yu Xia, Scott A. McLuckey · 2019 · International Journal of Mass Spectrometry
68. TopMSV: A Web-Based Tool for Top-Down Mass Spectrometry Data Visualization
    In Kwon Choi, Tianze Jiang, Sreekanth R. Kankara, Si Wu, Xiaowen Liu · 2021 · Journal of the American Society for Mass Spectrometry
69. A hybrid spectral library and protein sequence database search strategy for bottom-up and top-down proteomic data analysis
    Yuling Dai, R. Millikin, Zach Rolfs, Michael R. Shortreed, L. Smith · 2022 · Journal of Proteome Research
70. Proteoform characterization based on top-down mass spectrometry
    Jiancheng Zhong, Yusui Sun, Minzhu Xie, Wei Peng, Chushu Zhang, Fang‐Xiang Wu, Jianxin Wang · 2020 · Briefings in Bioinformatics
71. Harmonizing structural mass spectrometry analyses in the mass spec studio
    Daniel S. Ziemianowicz, Vladimir Sarpe, D. Alex Crowder, Troy J. Pells, Shaunak Raval, Morgan Hepburn, Atefeh Rafiei, David C. Schriemer · 2020 · Journal of Proteomics
72. Top-Down Proteomics for the Characterization and Quantification of Calreticulin Arginylation
    Richard M. Searfoss, Xingyu Liu, Benjamin Aaron Garcia, Zongtao Lin · 2025 · Analytical Chemistry
73. Resolution of Apolipoprotein A1 and A2 Proteoforms: Their Cardiometabolic Correlates and Implications for Future Research
    J. Wilkins, Anand Rohatgi · 2022 · Current Opinion in Lipidology
74. Mapping RNAPII CTD Phosphorylation Reveals That the Identity and Modification of Seventh Heptad Residues Direct Tyr1 Phosphorylation
    Nathaniel T. Burkholder, Sarah N. Sipe, Edwin E. Escobar, Mukesh Kumar Venkat Ramani, Seema Irani, Wanjie Yang, Haoyi Wu, Wendy L. Matthews, Jennifer S. Brodbelt, Yan Zhang · 2019 · ACS Chemical Biology
75. Ependymoma Pediatric Brain Tumor Protein Fingerprinting by Integrated Mass Spectrometry Platforms: A Pilot Investigation
    Diana Valeria Rossetti, Luca Massimi, Claudia Martelli, Federica Vincenzoni, Susanna Di Silvestre, Gianluca Scorpio, Gianpiero Tamburrini, Massimo Caldarelli, Andrea Urbani, Claudia Desiderio · 2020 · Cancers
76. A benchmarking protocol for intact protein-level Tandem Mass Tag (TMT) labeling for quantitative top-down proteomics
    Yanting Guo, Dahang Yu, Kellye A. Cupp‐Sutton, Xiaowen Liu, Si Wu · 2022 · MethodsX
77. Proteomics Mass Spectrometry Data Analysis Tools
    Aivett Bilbao Pena · 2018 · Elsevier eBooks
78. A multi-modal proteomics strategy for characterizing posttranslational modifications of tumor suppressor p53 reveals many sites but few modified forms
    Caroline J. DeHart, L. Fornelli, Lissa C. Anderson, Ryan T. Fellers, Dan Lu, C. Hendrickson, G. Lahav, J. Gunawardena, N. Kelleher · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
79. Online Electrochemical Reduction of Both Inter- and Intramolecular Disulfide Bridges in Immunoglobulins
    Martijn M. VanDuijn, Hendrik‐Jan Brouwer, Pablo Sanz de la Torre, Jean-Pierre Chervet, Theo M. Luider · 2022 · Analytical Chemistry
80. Top-Down-Assisted Bottom-Up Method for Homologous Protein Sequencing: Hemoglobin from 33 Bird Species
    Yang Song, Ünige A. Laskay, Inger-Marie E. Vilcins, Alan G. Barbour, Vicki Hopper Wysocki · 2015 · Journal of the American Society for Mass Spectrometry
81. Deciphering the safeguarding role of cysteine residues in p53 against H2O2-induced oxidation using high-resolution native mass spectrometry
    M. D. Peris-Díaz, A. Krężel, P. Barran · 2025 · Communications Chemistry
82. Imaging of Protein Assemblies up to 231 kDa in Tissues with Nano-DESI Mass Spectrometry
    Oliver J. Hale, Helen J. Cooper · 2025 · Analytical Chemistry
83. TB500/TB1000 and SGF1000: A scientific approach for a better understanding of misbranded and adulterated drugs
    Vivian Delcourt, Patrice Garcia, Benjamin Chabot, Agnès Barnabé, Maëlle Bouscarel, Benoît Loup, Marie‐Agnès Popot, Ludovic Bailly‐Chouriberry · 2022 · Drug Testing and Analysis
84. Capillary liquid chromatography coupled with mass spectrometry for analysis of nanogram protein quantities on a wide-pore superficially porous particle column in top-down proteomics
    Laurent Lignières, Véronique Legros, Manel Khelil, Nicolas Sénécaut, Matthew A. Lauber, Jean‐Michel Camadro, Guillaume Chevreux · 2022 · Journal of Chromatography B
85. Structural and Functional Studies of a gem -Dimethylating Methyltransferase from a trans -Acyltransferase Assembly Line
    Jessica L. Meinke, M. Rachel Mehaffey, Drew T. Wagner, Ningze Sun, Zhicheng Zhang, Jennifer S. Brodbelt, Adrian T. Keatinge‐Clay · 2018 · ACS Chemical Biology
86. Revealing Corynebacterium glutamicum proteoforms through top-down proteomics
    R. M. Melo, Jaques M. F. de Souza, T. Williams, W. Fontes, M. D. de Sousa, C. Ricart, L. H. F. Do Vale · 2023 · Scientific Reports
87. IsoForma: An R Package for Quantifying and Visualizing Positional Isomers in Top-Down LC-MS/MS Data
    David J. Degnan, Logan A. Lewis, Lisa Bramer, Lee Ann McCue, James J. Pesavento, Mowei Zhou, Aivett Bilbao Pena · 2024 · Journal of Proteome Research
88. Tracking internal and external ions for constrained peptides leads to enhanced sequence coverage and disulfide bond deciphering
    Steven Chin, Tao Chen, Rami N. Hannoush, Christopher M. Crittenden · 2021 · Journal of Pharmaceutical and Biomedical Analysis
89. Refining the N-Termini of the SARS-CoV-2 Spike Protein and Its Discrete Receptor-Binding Domain
    Robert A. D’Ippolito, Matthew R. Drew, Jennifer L. Mehalko, Kelly Snead, Vanessa E. Wall, Zoe Putman, Dominic Esposito, Caroline J. DeHart · 2021 · Journal of Proteome Research
90. MS imaging and mass spectrometric synaptosome profiling identify PEP-19/pcp4 as a synaptic molecule involved in spatial learning in mice
    Jeroen Aerts, Annelies Laeremans, Laurens Minerva, Kurt Boonen, Harshavardhan Budamgunta, Rudi D’Hooge, Dirk Valkenborg, Geert Baggerman, Lut Arckens · 2016 · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
91. The lysosomal endopeptidases Cathepsin D and L are selective and effective proteases for the middle‐down characterization of antibodies
    Tomislav Čaval, Elizabeth Sara Hecht, Wilfred H. Tang, Maelia Uy‐Gomez, Andrew C. Nichols, Yong Joo Kil, Wendy N. Sandoval, Marshall W. Bern, Albert J. R. Heck · 2021 · FEBS Journal
92. A core human gut microbe, Mediterraneibacter gnavus , produces a broad-spectrum bacteriocin mediterrocin
    Gabrielle Mingolelli, Jessia Raherisoanjato, Duong Trinh, Yu Gao, Matthew T. Henke · 2025 · mBio
93. Preanalytical Strategies for Native Mass Spectrometry Analysis of Protein Modifications, Complexes, and Higher-Order Structures
    Navid Jubaer Ayon · 2025 · AppliedChem
94. Nucleo-SAFARI: Automated Identification of Fragment Ions in Top-Down MS/MS Spectra of Nucleic Acids
    Michael B. Lanzillotti, Jennifer S. Brodbelt · 2024 · Analytical Chemistry
95. TopDownApp: An open and modular platform for analysis and visualisation of top‐down proteomics data
    Mathias Walzer, Kyowon Jeong, D. Tabb, J. Vizcaíno · 2023 · Proteomics
96. Development of a top-down MS assay for specific identification of human periostin isoforms
    Christian E Rusbjerg-Weberskov, Megan S. Gant, J. Chamot-Rooke, N. S. Nielsen, J. J. Enghild · 2024 · Frontiers in Molecular Biosciences
97. Methionine Oxidation Footprinting in Intact Proteins (MOFIP) Using Top‐Down Proteomics
    Anju Teresa Sunny, Kellye A. Cupp‐Sutton, Zhitao Zhao, Trishika Chowdhury, Yanting Guo, Si Wu · 2025 · PROTEOMICS
98. Profiling Dopamine-Induced Oxidized Proteoforms of β-synuclein by Top-Down Mass Spectrometry
    Arianna Luise, Elena De Cecco, Erika Ponzini, Martina Sollazzo, Pierluigi Mauri, Frank Sobott, Giuseppe Legname, Rita Grandori, Carlo Santambrogio · 2021 · Antioxidants
99. A multi-technique analysis of gelatin biodegradation on the surface of core–shell nanoparticles by Alteromonas macleodii extracellular proteases
    Sergio Fernández-Castillo Suárez, Cécile Courrèges, Javier Jiménez Lamana, Simon Godin, Sophie Nolivos, Régis Grimaud, Luisa Ronga, Joanna Szpunar, Joachim Allouche · 2023 · Environmental Science Nano
100. FLASHApp: Interactive Data Analysis and Visualization for Top‐Down Proteomics
     Tom David Müller, Jihyung Kim, Andrew Almaguer, Ayesha Feroz, Jaekwan Kim, Axel Walter, Wonhyeuk Jung, Oliver Kohlbacher, Kyowon Jeong · 2025 · PROTEOMICS