AbDesign: An algorithm for combinatorial backbone design guided by natural conformations and sequences: Combinatorial Backbone Design in Antibodies

Lapidoth, Gideon D., Baran, Dror, Pszolla, Gabriele M., Norn, Christoffer, Alon, Assaf, Tyka, Michael D., Fleishman, Sarel J.·2015·Proteins Structure Function and Bioinformatics

Cited by (108)

Items 101–108 of 108

  1. Computer-aided antibody discovery for emerging contaminants: bridging molecular immunotechnology and food-safety sustainability
    Jing Zhao, A.M. Abd EL-Aty, Peipei Li, Yongxin She, Fen Jin, Jing Wang, Mingqian Tan, Lufei Zheng, Maojun Jin · 2026 · Trends in Food Science & Technology
  2. CoMBCR: Co-Learning Multi-Modalities of BCRs and gene expressions
    Yiping Zou, Jiaqi Luo, Shuai Cheng Li · 2026 · Bioinformatics
  3. Molecular Modeling and Artificial Intelligence for Computational Protein Design : conception of optimized enzymes and nanobodies
    Jelena Vučinić · 2021 · theses.fr (ABES)
  4. RankNB: Ranking-Aware Direct Preference Optimization for Alignment of a Nanobody Diffusion Model
    Yikai Wu, Di Wu, Jia Shu, Stephanie Maria Linker, Karin Hrovatin, Mathias Winkel, Feng Tan · 2026 · IEEE International Conference on Acoustics Speech and Signal Processing
  5. Robust Conditional Diffusion with Noisy Templates for Antibody Sequence–Structure Design
    Pi Liu, Chenyang Yan, Chenyang Yan, Xiao Liu, Shujian Huang, 吴镇, Jianbing Zhang · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
  6. A Multi-Model Strategy for Optimizing Hepatitis B Virus preS1 Epitope Recognition by the Antibody HzKR127
    陈文青, Yuanzhong Tu, Kai Wang, Runze Xie, Pengyuan Yang, Yanan Gao, Wenxiang Huang · 2026 · Current Issues in Molecular Biology
  7. The sweet spot in protein design—Where deep learning meets first principles
    Gabriel Cia, Gabriele Orlando, Damiano Cianferoni, Rob van der Kant, Javier Delgado, Erik Verschueren, Frédéric Rousseau, Luis G. Serrano, Joost W. H. Schymkowitz · 2026 · FEBS Letters
  8. Relation-Aware Graph–Hypergraph Networks for Antibody Sequence–Structure Co-Design
    Jinzhu Wei, Shuijun Zhang, Hongliang Duan, Leyi Wei, JINGJING GUO · 2026 · bioRxiv (Cold Spring Harbor Laboratory)