Comparative Structure, Proximal Promoter Elements, and Chromosome Location of the Human Eosinophil Major Basic Protein Genes
Abstract
Human eosinophil major basic protein (MBP) is strongly implicated as a mediator of disease, especially bronchial asthma. We recently isolated a highly divergent human homologue of MBP (MBPH). Given human MBP's importance in disease and the restricted expression of it and human MBPH, we isolated the 4.6-kb human MBPH gene (HGMW-approved symbol PRG3). Comparisons among the human MBP (PRG2), human MBPH, and murine MBP-1 (mMBP-1; Prg2) genes suggest that the human MBP and mMBP-1 genes are more closely related than either is to the human MBPH gene. Proximal promoters of these three genes show conservation of potential binding sites for IK2 and STAT and of a known GATA site. However, a known C/EBP site is altered in the human MBPH gene's proximal promoter. The human MBP and MBPH genes localized to chromosome 11 in the centromere to 11q12 region. Thus, the human MBP and MBPH genes have diverged considerably, probably following a gene duplication event. Furthermore, the identified conserved and distinct proximal promoter elements likely contribute to the eosinophil-restricted and relatively reduced transcription of the human MBPH gene.
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Many of the downregulated proteins in TET2-CH are markers of other haematopoietic lineages, such as KIR2DL2 and KIR2DL3, and PRG2 and PRG3.
“Many of the downregulated proteins are markers of other haematopoietic lineages, such as KIR2DL2 and KIR2DL3 (natural killer cell activation)52, and PRG2 and PRG3 (constituents of eosinophil granules also involved in basophil stimulation)53,54.”
From Rare variant associations with plasma protein levels in the UK Biobank (2023) · cites this paper as [54]
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Rare variant associations with plasma protein levels in the UK Biobank
Dhindsa, R. S., Burren, O. S., Sun, B. B., Prins, B. P., Matelska, D., Wheeler, E., Mitchell, J., Oerton, E., Hristova, V. A., Smith, K. R., et al. (2023) · Nature · doi:10.1038/s41586-023-06547-x · Cited by 193 · see citing works
- Authors
- Plager, D. A., Weiler, D. A., Loegering, D. A., Johnson, W. B., Haley, L., Eddy, R. L., Shows, T. B., & Gleich, G. J.
- Affiliations
- Mayo Clinic (US)
- Roswell Park Comprehensive Cancer Center (US)
- Corresponding author
- Plager, Douglas A.
- ORCID
- Gleich, Gerald J.
- Venue
- Genomics
- Publisher
- Elsevier BV
- Published
- 2001-02
- Volume
- 71
- Issue
- 3
- Pages
- 271-281
- ISSN
- 0888-7543 (ISSN-L)
- OpenAlex
- W2001257438
- Cited by
- 8
- References
- 4
- Citations by year
- 2024: 2 · 2023: 1 · 2016: 1 · 2012: 1
- FWCI
- 0.20
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Genomics (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Mayo Clinic
- Mayo Foundation for Medical Education and Research
- National Institutes of Health (5r01dc003697-03, 5r01ca063333-06)
- National Cancer Institute (CA63333)
- National Institute on Deafness and Other Communication Disorders (DC03697)
- National Institute of Allergy and Infectious Diseases (AI 09728, T32AI007047, AI07047)
- Topics
- Health Sciences › Medicine › Physiology › Asthma and respiratory diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Immunology and Microbiology › Immunology › Mast cells and histamine
- Keywords
- eosinophil major basic protein, MBP-1, gene structure, proximal promoter, transcription factor binding sites, STAT, gene duplication, chromosome 11, asthma
- MeSH terms
- Animals, Base Sequence, Binding Sites, Blood Proteins, Centromere, Chromosome Mapping, Chromosomes, Human, Pair 11, Exons, Humans, Introns, Models, Genetic, Molecular Sequence Data, Promoter Regions, Genetic, Ribonucleases, Sequence Homology, Nucleic Acid, Transcription, Genetic, Gene Library, Conserved Sequence, In Situ Hybridization, Fluorescence, Sequence Analysis, DNA, DNA, Complementary, Evolution, Molecular, CCAAT-Enhancer-Binding Proteins, Eosinophil Granule Proteins, Eosinophil Major Basic Protein, Mice
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