The DOI matches its Crossref record; 71 of the 71 references it cites were found in a registry or an index.
A new MADS-box gene (IbMADS10) from sweet potato (Ipomoea batatas (L.) Lam) is involved in the accumulation of anthocyanin
Abstract
A new MADS-box gene designated as IbMADS10 was cloned and its expression was characterized from sweet potato (Ipomoea batatas (L.) Lam.) cv. Beniazuma. The deduced amino acid sequence of the gene indicated high homology with members of the MADS-box family of transcription factors. IbMADS10 shares high amino acid sequence similarity with the DEFH28 of Antirrhinum majus (64%) and with BpMADS4 of Betula pendula (61%) of the SQUA subfamily. Southern blot analysis revealed that the IbMADS10 is present in one or low copy number in the sweet potato genome. The gene is specifically expressed in the pigmented tissues such as in the flower bud, in the pink and in red roots, and hence, it was speculated that the IbMADS10 gene might be correlated with anthocyanin biosynthesis in sweet potato. RNA blot expression of the anthocyanin biosynthesis genes encoding for CHS, CHI, F3H, DFR, ANS and UFTG carried out in the tissues where the IbMADS10 gene was expressed revealed similar transcript levels in all tissues where the IbMADS10 gene is highly expressed, indicating that the IbMADS10 gene is highly correlated with the anthocyanin biosynthesis genes. Another important aspect is the pigmented phenotypes of transgenic calli that ectopically express the IbMADS10 gene, thereby supporting its involvement in the developmental regulation of pigment formation. Tissue printing result further strengthens the hypothesis that the IbMADS10 gene is indeed involved in anthocyanin pigmentation in sweet potato. As the purpose of the IbMADS10 gene is pigmentation, its function, therefore, resembles that of the transparent testa (tt) genes of Arabidopsis.
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“As indicated previously by Wilson and Lowe [5], and as demonstrated by us [7] for both the leading Israeli sweetpotato variety Georgia Jet and an important USA variety, Beauregard, initiation of SR formation is marked by the development of AC cells adjacent to xylem elements, starting 3 to 4 weeks after transplanting.”
In the citing paper
“Wilson and Lowe [5] also suggested that only the appearance of AC can prevent stele lignification.”
In the citing paper
“The relationship between stele lignification and inability of adventitious roots to develop into SRs has also been observed by Wilson and Lowe [5], Belehu et al. [6] and Villordon et al. [7].”
Citations
Cites
Molecular Cloning: A Laboratory Manual
Sambrook, J., Fritsch, E., & Maniatis, T. (1989) · UCLA - Biblioteca de Ciencias de la Salud · Cited by 133,589
Flavonoid Biosynthesis. A Colorful Model for Genetics, Biochemistry, Cell Biology, and Biotechnology
Winkel, A. (2001) · PLANT PHYSIOLOGY · doi:10.1104/pp.126.2.485 · Cited by 3,702
A simple and efficient method for isolating RNA from pine trees
Chang, S., Puryear, J. D., & Cairney, J. (1993) · Plant Molecular Biology Reporter · doi:10.1007/bf02670468 · Cited by 3,559
The war of the whorls: genetic interactions controlling flower development
Coen, E., & Meyerowitz, E. M. (1991) · Nature · doi:10.1038/353031a0 · Cited by 3,045
Flavonoids: a colorful model for the regulation and evolution of biochemical pathways
Koes, R. E., Verweij, W., & Quattrocchio, F. M. (2005) · Trends in Plant Science · doi:10.1016/j.tplants.2005.03.002 · Cited by 1,645
The protein encoded by the Arabidopsis homeotic gene agamous resembles transcription factors
Yanofsky, M. F., Mā, H., Bowman, J. L., Drews, G. N., Feldmann, K. A., & Meyerowitz, E. M. (1990) · Nature · doi:10.1038/346035a0 · Cited by 1,608
Transcription factors: structural families and principles of DNA recognition.
Pabo, C., & Sauer, R. (1992) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.61.070192.005201 · Cited by 1,445
Molecular characterization of the Arabidopsis floral homeotic gene APETALA1
Mandel, M. A., Gustafson‐Brown, C., Savidge, B., & Yanofsky, M. F. (1992) · Nature · doi:10.1038/360273a0 · Cited by 1,171
The ABCs of floral homeotic genes
Weigel, D., & Meyerowitz, E. M. (1994) · Cell · doi:10.1016/0092-8674(94)90291-7 · Cited by 1,041
Becker, A., & Theissen, G. (2003) · Molecular Phylogenetics and Evolution · doi:10.1016/s1055-7903(03)00207-0 · Cited by 1,001
Research works printed but not linked: 2
- Somers TC (1976) Pigment development during the ripening of grape. Vitis 14:269–277
- Wilson LA (1982) Tuberization in sweetpotato (Ipomoea batatas (L) Lam.). In: RL Villareal and TD Griggs (eds) “Sweetpotato” Proceedings of the 1st International Symposium, AVRDC: Taiwan, China, pp 79–93
Cited by
Recent advances in the transcriptional regulation of the flavonoid biosynthetic pathway
Hichri, I., Barrieu, F., Bogs, J., Kappel, C., Delrot, S., & Lauvergeat, V. (2011) · Journal of Experimental Botany · doi:10.1093/jxb/erq442 · Cited by 1,273
Recent advances on the regulation of anthocyanin synthesis in reproductive organs
Petroni, K., & Tonelli, C. (2011) · Plant Science · doi:10.1016/j.plantsci.2011.05.009 · Cited by 940
Davies, K. M., Albert, N. W., & Schwinn, K. E. (2012) · Functional Plant Biology · doi:10.1071/fp12195 · Cited by 343
Mano, H., Ogasawara, F., Sato, K., Higo, H., & Minobe, Y. (2007) · PLANT PHYSIOLOGY · doi:10.1104/pp.106.094425 · Cited by 290
A SQUAMOSA MADS Box Gene Involved in the Regulation of Anthocyanin Accumulation in Bilberry Fruits
Jaakola, L., Poole, M., Jones, M. O., Kämäräinen, T., Koskimäki, J. J., Hohtola, A., Häggman, H., Fraser, P. D., Manning, K. C., King, G. J. W., et al. (2010) · PLANT PHYSIOLOGY · doi:10.1104/pp.110.158279 · Cited by 263
Metadata
- Authors
- Lalusin, A. G., Nishita, K., Kim, S.-H., Ohta, M., & Fujimura, T.
- Affiliations
- University of the Philippines Los Baños (PH)
- University of Tsukuba (JP)
- Instituto de Ecología (MX)
- Corresponding author
- Lalusin, Antonio G.
- Venue
- Molecular Genetics and Genomics
- Published
- 2005-12-07
- Volume
- 275
- Issue
- 1
- Pages
- 44-54
- ISSN
- 1617-4615 (ISSN-L)
- 1617-4623
- OpenAlex
- W2146168677
- Cited by
- 83
- References
- 71
- Citations by year
- 2026: 1 · 2025: 5 · 2024: 2 · 2023: 4 · 2022: 6 · 2021: 3 · 2020: 7 · 2019: 6 · 2018: 7 · 2017: 6 · 2016: 6 · 2015: 5 · 2014: 4 · 2013: 5 · 2012: 4
- FWCI
- 0.75
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Molecular Genetics and Genomics (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Ministry of Education, Culture, Sports, Science and Technology
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant Gene Expression Analysis
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant biochemistry and biosynthesis
- Keywords
- MADS-box genes, Ipomoea batatas, anthocyanin biosynthesis, anthocyanin accumulation, transcription factors, gene expression, pigment production, flower pigmentation, root pigmentation
- MeSH terms
- Anthocyanins, Pigmentation, Plant Proteins, Gene Expression Regulation, Plant, Gene Dosage, RNA, Plant, MADS Domain Proteins, Ipomoea batatas
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