Cited by 80Explainable Artificial Intelligence (XAI)Philosophy and History of ScienceEthics and Social Impacts of AI

Scientific Exploration and Explainable Artificial Intelligence

Open access
Zednik, Carlos, Boelsen, Hannes·2022·Minds and Machines

Abstract

Models developed using machine learning are increasingly prevalent in scientific research. At the same time, these models are notoriously opaque. Explainable AI aims to mitigate the impact of opacity by rendering opaque models transparent. More than being just the solution to a problem, however, Explainable AI can also play an invaluable role in scientific exploration. This paper describes how post-hoc analytic techniques from Explainable AI can be used to refine target phenomena in medical science, to identify starting points for future investigations of (potentially) causal relationships, and to generate possible explanations of target phenomena in cognitive science. In this way, this paper describes how Explainable AI—over and above machine learning itself—contributes to the efficiency and scope of data-driven scientific research.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1007/s11023-021-09583-6

Cites

7 of 7 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • XAI is unlikely to fully resolve these epistemic difficulties in all cases and is therefore unlikely (for now at least) to fully minimise the risk of hermeneutic harm.

    “We have suggested that XAI-for all its other social, ethical, or scientific benefits (Zednik & Boelsen, 2022)-is unlikely to fully resolve these epistemic difficulties in all cases and is therefore unlikely (for now at least) to fully minimise the risk of hermeneutic harm.”

    From Hidden Risks: Artificial Intelligence and Hermeneutic Harm (2025) · cites this paper as Zednik & Boelsen, 2022

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 34

  1. Bau, D., Zhou, B., Khosla, A., Oliva, A., & Torralba, A. (2017). Network dissection: Quantifying inter- pretability of deep visual representations. IEEE Conference on Computer Vision and Pattern Recog- nition (CVPR), 3319-3327.
  2. Beisbart, C. (2021). Opacity thought through: On the intransparency of computer simulations. Synthese. https:// doi. org/ 10. 1007/ s11229-021-03305-2 · DOI
  3. Boon, M. (2020). "How Scientists are Brought Back into Science: The Error of Empiricism". In: Ber- tolaso M., Sterpetti F. (eds.) A Critical Reflection on Automated Science. Human Perspectives in Health Sciences and Technology, vol 1. Springer, Cham.
  4. Bühlmann, P. (2013). Causal statistical inference in high dimensions. Mathematical Methods in Opera- tions Research, 77(3), 357-370.
  5. Cichy, R. M., & Kaiser, D. (2019). Deep neural networks as scientific models. Trends in Cognitive Sci- ences, 23(4), 305-317.
  6. Confalonieri, R., Coba, L., Wagner, B., & Besold, T. R. (2021). A historical perspective of explainable Artificial Intelligence. WIREs Data Mining and Knowledge Discovery, 11(1), e1391.
  7. Craver, C., & Darden, L. (2013). In Search of Mechanisms: Discoveries Across the Life Sciences. Chicago University Press.
  8. Dattilo, A., Vanderburg, A., Shallue, C. J., Mayo, A. W., Berlind, P., Bieryla, A., Calkins, M. L., Esquerdo, G. A., Everett, M. E., Howell, S. B., Latham, D. W., Scott, N. J., & Yu, L. (2019). Identi- fying exoplanets with deep learning II: Two new super-earths uncovered by a neural network in K2 data. arXiv, 1903.10507. · arXiv
  9. Doran, D., Schulz, S., & Besold, T. R. (2017). What does explainable AI really mean? A new conceptual- ization of perspectives. arXiv, 1710.00794 · arXiv
  10. Hohman, F. M., Kahng, M., Pienta, R., & Chau, D. H. (2018). Visual analytics in deep learning: An inter- rogative survey for the next frontiers. IEEE Transactions on Visualization and Computer Graphics.
  11. Kriegeskorte, N., Mur, M., & Bandettini, P. (2008). Representational similarity analysis -connecting the branches of systems neuroscience. Frontiers in Systems Neuroscience, 2(4), 1-28.
  12. Li, X., Wu, J., Chen, E. Z., & Jiang, H. (2019). What evidence does deep learning model use to classify skin lesions? arXiv, 1811.01051v2. · arXiv
  13. Lipton, Z.C. (2016). The mythos of model interpretability. arXiv, 1606.03490v3. · arXiv
  14. Lundberg, S. M. & Lee, S. (2017). A unified approach to interpreting model predictions. arXiv, 1705.07874v2. · arXiv
  15. Ma, W., Qiu, Z., Song, J., Li, J., Cheng, Q., Zhai, J., & Ma, C. (2018). A deep convolutional neural net- work approach for predicting phenotypes from genotypes. Planta, 248(5), 1307-1318.
  16. Marr, D. (1982). Vision: A computational investigation into the human representation and processing of visual information. MIT Press.
  17. Massimi, M. (2019). Two kinds of exploratory models. Philosophy of Science, 86(5), 869-881.
  18. Pearl, J. (2000). Causality: Models, Reasoning, and Inference. Cambridge University Press.
  19. Ratti, E. (2015). Big Data Biology: Between Eliminative Inferences and Exploratory Experiments. Phi- losophy of Science, 82(2), 198-218.
  20. Ribeiro, M. T., Singh, S., & Guestrin, C. (2016). "Why Should I Trust You?": Explaining the Predictions of Any Classifier. arXiv, 1602.04938v3. · arXiv
  21. Ritchie, J. B., Kaplan, D.M., & Klein, C. (2019). Decoding the brain: neural representation and the limits of multivariate pattern analysis in cognitive neuroscience. British Journal for the Philosophy of Sci- ence, 70(2, 581-607.
  22. Rudin, C. (2019). Stop explaining black box machine learning models for high stakes decisions and use interpretable models instead. Nature Machine Intelligence, 1(5), 206-215.
  23. Salmon, W. C. (1989). Four decades of scientific explanation. University of Minnesota Press.
  24. Shagrir, O. (2006). Why we view the brain as a computer. Synthese, 153(3), 393-416.
  25. Scientific Exploration and Explainable Artificial… Steinle, F. (1997). Entering New Fields: Exploratory Uses of Experimentation. Philosophy of Science 64 (Proceedings): S64-S74.
  26. Sullivan, E. (2019). Understanding from machine learning models. The British Journal for the Philoso- phy of Science, axz035.
  27. Tomsett, R., Braines, D., Harborne, D., Preece, A., & Chakraborty, S. (2018). Interpretable to whom? A role-based model for analyzing interpretable machine learning systems. arXiv, 1806.07552. · arXiv
  28. Wachter, S., Mittelstadt, B., & Russell, C. (2018). Counterfactual explanations without opening the black box: Automated decisions and the GDPR. Harvard Journal of Law & Technology, 31(2).
  29. Wu, Y., Ding, Y., Tanaka, Y., & Zhang, W. (2014). Risk factors contributing to type 2 diabetes and recent advances in the treatment and prevention. International Journal of Medical Sciences, 11(11), 1185-1200.
  30. Zednik, C. (2018). Will machine learning yield machine intelligence? In V. Müller (ed.), Philosophy and Theory of Artificial Intelligence 2017. PT-AI 2017. Studies in Applied Philosophy, Epistemology and Rational Ethics, 44. Springer: Cham.
  31. Zerilli, J., Knott, A., Maclaurin, J., & Gavaghan, C. (2018). Transparency in algorithmic and human deci- sion-making: Is there a double standard? Philosophy & Technology, 32(4), 661-683.
  32. Zhavoronkov, A. (2018). Artificial intelligence for drug discovery, biomarker development, and genera- tion of novel chemistry. Molecular Pharmaceutics, 15(10), 4311-4313.
  33. Zilke, J. R., Mencia, E. L., & Janssen, F. (2016). DeepRED -Rule extraction from deep neural networks. In T. Calders, M. Ceci, & D. Malerba (eds.), Discovery Science 19th International Conference (pp. 457-473).
  34. Zintgraf, L. M., Cohen, T. S., Adel, T., & Welling, M. (2017). Visualizing deep neural network decisions: Prediction difference analysis. arXiv, 1702.04595. · arXiv

Cited by

Sorted by citations

Authors
Zednik, C., & Boelsen, H.
Affiliations
  • Eindhoven University of Technology (NL)
  • Otto-von-Guericke-Universität Magdeburg (DE)
Corresponding author
Zednik, Carlos
Venue
Minds and Machines
Published
2022-03
Volume
32
Issue
1
Pages
219-239
ISSN
  • 0924-6495 (ISSN-L)
  • 1572-8641
OpenAlex
W4220941667
Cited by
80
References
7
Citations by year
2026: 17 · 2025: 22 · 2024: 27 · 2023: 9 · 2022: 5
FWCI
5.18
Type
journal article
Language
en
Open access
Locations
  • Minds and Machines (publishedVersion, cc-by)
  • TU/e Research Portal (publishedVersion, other-oa)
  • TU/e Research Portal (submittedVersion, other-oa)
Funders
Deutsche Forschungsgemeinschaft (ZE-1062/4-1)
Topics
  • Physical Sciences › Computer Science › Artificial Intelligence › Explainable Artificial Intelligence (XAI)
  • Social Sciences › Arts and Humanities › History and Philosophy of Science › Philosophy and History of Science
  • Social Sciences › Safety Research › Ethics and Social Impacts of AI
Keywords
explainable AI, scientific exploration, model opacity, post-hoc explanation, causal discovery, medical sciences, cognitive science, data-driven research, scientific explanation

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review