Cited by 19Proteoglycans and glycosaminoglycans researchCarbohydrate Chemistry and SynthesisMass Spectrometry Techniques and Applications

MS analysis of chondroitin polymerization: Effects of Mn2+ ions on the stability of UDP-sugars and chondroitin synthesis

Sugiura, Nobuo, Shimokata, Satoshi, Watanabe, Hideto, Kimata, Koji·2007·Analytical Biochemistry

Abstract

Chondroitin polymerase from Escherichia coli strain K4 (K4CP) synthesizes chondroitin (CH) polysaccharides by the alternate addition of N-acetyl-D-galactosamine (GalNAc) and D-glucuronic acid (GlcA) to acceptor CH oligosaccharides in the presence of Mn(2+) ions. In this study, we applied matrix-assisted laser desorption ionization and time-of-flight mass spectrometry (MALDI-TOF MS) for the further characterization of the products synthesized by K4CP from CH hexasaccharide as an initial acceptor and UDP-GalNAc and UDP-GlcA as donors. The analysis identified individual CH chains of various lengths and enabled the calculation of their average molecular weights. The ion peaks of the CH chains synthesized in the short-time reactions demonstrated not only the alternate addition of GlcA and GalNAc but also the more frequent transfer of GlcA and GalNAc, consistent with our previous kinetic data. In contrast, the MS spectra of the chains synthesized in the long-time reaction showed that CH chains containing GalNAc at the nonreducing ends were more abundant than those containing GlcA. We found that this inconsistency was due to the preferential decomposition of UDP-GlcA by Mn(2+) ions. We defined the optimal conditions to yield further elongation of the CH chains that have nearly equal numbers of GlcA and GalNAc residues at the nonreducing ends.

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Crossref · 10.1016/j.ab.2007.02.023

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  • UDP-GlcNAc synthesis kinetics were well identified in the original calibration, since UDP-GlcNAc is chemically stable and comparatively reliable to measure.

    “The result is reinforced by the fidelity of the UDP-GlcNAc submodel, since UDP-GlcNAc is chemically stable and comparatively reliable to measure [55], so its synthesis kinetics were well identified in the original calibration.”

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Authors
Sugiura, N., Shimokata, S., Watanabe, H., & Kimata, K.
Affiliations
Institute for Molecular Science of Medicine, Aichi Medical University (JP)
Venue
Analytical Biochemistry
Publisher
Elsevier BV
Published
2007-06
Volume
365
Issue
1
Pages
62-73
ISSN
0003-2697 (ISSN-L)
OpenAlex
W2080089207
Cited by
19
References
0
Citations by year
2026: 1 · 2025: 1 · 2023: 2 · 2022: 1 · 2018: 1 · 2016: 3 · 2013: 1 · 2012: 2
FWCI
0.64
Type
journal article
Language
en
Open access
closed
Locations
  • Analytical Biochemistry (publishedVersion)
  • PubMed (publishedVersion)
Funders
  • New Energy and Industrial Technology Development Organization
  • Ministry of Education, Culture, Sports, Science and Technology
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Proteoglycans and glycosaminoglycans research
  • Physical Sciences › Chemistry › Organic Chemistry › Carbohydrate Chemistry and Synthesis
  • Physical Sciences › Chemistry › Spectroscopy › Mass Spectrometry Techniques and Applications
Keywords
manganese ions, UDP-glucuronic acid, polysaccharide synthesis
MeSH terms
Carbohydrate Sequence, Catalysis, Cations, Chondroitin, Chondroitinases and Chondroitin Lyases, Hexosyltransferases, Hydrolysis, Kinetics, Manganese, Models, Chemical, Molecular Weight, Substrate Specificity, Uridine Diphosphate Glucuronic Acid, Uridine Diphosphate N-Acetylgalactosamine, Uridine Diphosphate N-Acetylglucosamine, Uridine Diphosphate Sugars, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

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