Genome-Wide Associations Reveal Human-Mouse Genetic Convergence and Modifiers of Myogenesis, CPNE1 and STC2
Open accessAbstract
Muscle bulk in adult healthy humans is highly variable even after height, age, and sex are accounted for. Low muscle mass, due to fewer and/or smaller constituent muscle fibers, would exacerbate the impact of muscle loss occurring in aging or disease. Genetic variability substantially influences muscle mass differences, but causative genes remain largely unknown. In a genome-wide association study (GWAS) on appendicular lean mass (ALM) in a population of 85,750 middle-aged (aged 38-49 years) individuals from the UK Biobank (UKB), we found 182 loci associated with ALM (p -8 ). We replicated associations for 78% of these loci (p -8 ) with ALM in a population of 181,862 elderly (aged 60-74 years) individuals from UKB. We also conducted a GWAS on hindlimb skeletal muscle mass of 1,867 mice from an advanced intercross between two inbred strains (LG/J and SM/J); this GWAS identified 23 quantitative trait loci. Thirty-eight positional candidates distributed across five loci overlapped between the two species. In vitro studies of positional candidates confirmed CPNE1 and STC2 as modifiers of myogenesis. Collectively, these findings shed light on the genetics of muscle mass variability in humans and identify targets for the development of interventions for treatment of muscle loss. The overlapping results between humans and the mouse model GWAS point to shared genetic mechanisms across species.
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Among these loci, two genes, CPNE1 and STC2, were confirmed as in vitro modifiers of muscle mass, as their silencing with RNA interference increased the length of myotubes.
“Among them, two genes were confirmed as in vitro modifiers of muscle mass, as their silencing with RNA interference increased the length of myotubes.”
From Main Pathogenic Mechanisms and Recent Advances in COPD Peripheral Skeletal Muscle Wasting (2023) · cites this paper as [148]
A GWAS performed simultaneously on humans and mice identified 23 loci associated with appendicular lean mass.
“Recently, a GWAS performed simultaneously on humans and mice allowed the identification of 23 loci associated with appendicular lean mass [148].”
From Main Pathogenic Mechanisms and Recent Advances in COPD Peripheral Skeletal Muscle Wasting (2023) · cites this paper as [148]
Cites
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Advantages and pitfalls in the application of mixed-model association methods
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Main Pathogenic Mechanisms and Recent Advances in COPD Peripheral Skeletal Muscle Wasting
Henrot, P., Dupin, I., Schilfarth, P., Esteves, P., Blervaque, L., Zysman, M., Gouzi, F., Hayot, M., Pomiès, P., & Berger, P. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24076454 · Cited by 85 · see citing works
“Recently, a GWAS performed simultaneously on humans and mice allowed the identification of 23 loci associated with appendicular lean mass [148].”
Background
- Authors
- Hernandez Cordero, A. I., Gonzales, N. M., Parker, C. C., Sokolof, G., Vandenbergh, D. J., Cheng, R., Abney, M., Sko, A., Douglas, A., Palmer, A. A., Gregory, J. S., & Lionikas, A.
- Affiliations
- University of Chicago (US)
- Middlebury College (US)
- University of Iowa (US)
- Pennsylvania State University (US)
- University of California San Diego (US)
- University of Aberdeen (GB)
- Corresponding author
- Lionikas, Arimantas
- ORCID
- Venue
- The American Journal of Human Genetics
- Publisher
- Elsevier BV
- Published
- 2019-12
- Volume
- 105
- Issue
- 6
- Pages
- 1222-1236
- ISSN
- 0002-9297 (ISSN-L)
- PMC
- PMC6904802
- OpenAlex
- W2991512209
- Cited by
- 59
- References
- 4
- Citations by year
- 2026: 6 · 2025: 6 · 2024: 9 · 2023: 12 · 2022: 10 · 2021: 4 · 2020: 10 · 2019: 1 · 2018: 1
- FWCI
- 3.77
- Type
- journal article
- Language
- en
- Update notices
- erratum (2020-01-02)
- Open access
- bronze
- doi.org
- Licence
- Locations
- The American Journal of Human Genetics (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Aberdeen University Research Archive (Aberdeen University) (submittedVersion)
- eScholarship (California Digital Library) (submittedVersion)
- Funders
- University of Aberdeen
- Elphinstone and IMS studentship
- Schweppe Foundation
- National Institutes of Health
- NIH
- National Institute of Arthritis and Musculoskeletal and Skin Diseases
- NIAMS (AL: R01AR056280)
- National Institute on Drug Abuse
- NIDA (AAP:R01DA021336, AAP:R21DA024845, AAP:T32MH020065, NMG:F31DA03635803)
- National Institute of General Medical Sciences
- NIGMS (NMG:T32GM007197)
- National Human Genome Research Institute
- NHGRI (MA:R01 HG002899)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Physical Performance
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Muscle Physiology and Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
- Keywords
- appendicular lean mass, myogenesis, CPNE1, STC2, skeletal muscle mass, quantitative trait loci, muscle mass loss, aging, skeletal muscle atrophy, positional candidate genes
- MeSH terms
- Adult, Aged, Aging, Animals, Body Composition, Body Weight, Calcium-Binding Proteins, Female, Follow-Up Studies, Glycoproteins, Humans, Male, Middle Aged, Thinness, Case-Control Studies, Muscle, Skeletal, Muscle Development, Intercellular Signaling Peptides and Proteins, Quantitative Trait Loci, Mice, Genome-Wide Association Study
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