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Transcriptomic analyses reveal the molecular mechanisms of schisandrin B alleviates CCl4-induced liver fibrosis in rats by RNA-sequencing
Abstract
Liver fibrosis is a progression of chronic liver disease with lacks effective therapies at present. Schisandrin B (Sch B), a bioactive compound extracted from the traditional Chinese medicine Schisandra chinensis, was reported to benefit liver diseases. This study aimed to investigate the therapeutic effects and molecular mechanisms of Sch B against CCl 4 -induced liver fibrosis in rats. RNA sequencing and transcriptome analysis were performed collaboratively, including analysis of differential gene expression, gene ontology (GO) analysis, pathway analysis and pathway-act-network analysis. The results demonstrated that Sch B effectively alleviated CCl 4 -induced liver damage and fibrosis in rats, as evidenced by improved liver function and decreased extracellular matrix deposition. Furthermore, 4440 (1878 up-regulated, 2562 down-regulated) genes in the model group versus (vs) normal group, 4243 (2584 up-regulated, 1659 down-regulated) genes in Sch B-treated group vs model group were identified as differentially expressed genes (DEGs). Subsequently, GO analysis revealed that DEGs were mainly enriched in metabolism, oxidation-reduction, endoplasmic reticulum stress and apoptosis-related biological processes. Pathway analysis suggested that Sch B up-regulated cytochrome P450 drug metabolism, PPAR signaling pathways, and down-regulated glutathione metabolism pathways. In addition, the regulatory patterns of Sch B on key genes and pathways were also confirmed. In conclusion, our s…
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RNA sequencing data from GEO accession GSE110096 were used.
“RNA sequencing data from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus (GEO) with accession number GSE110096 was used [27].”
From Mechanical stiffness orchestrates distinct regulation of MRTFs and YAP / TAZ transcriptional cofactors in hepatocytes (2026) · cites this paper as [27]
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Liver fibrosis resolution: from molecular mechanisms to therapeutic opportunities
Pei, Q., Yi, Q., & Tang, L. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24119671 · Cited by 121
Torres‐Ortiz, B. S., Pérez‐Calixto, D., Carretero‐Ortega, J., Guzman‐López, A. G., Pinto‐Dueñas, D. C., Hernández‐Juárez, M., Jiménez‐Escobar, A., Rodríguez‐Hernández, A., Díaz‐Bello, B., Serna‐Márquez, N., et al. (2026) · The FEBS Journal · doi:10.1111/febs.70570
Metadata
- Authors
- Zhang, H., Chen, Q., Dahan, A., Xue, J., Wei, L., Tan, W., & Zhang, G.
- Affiliations
- Tongji University (CN)
- Second Military Medical University (CN)
- Ben-Gurion University of the Negev (IL)
- Corresponding author
- Zhang, Hai
- Tan, Weifeng
- Zhang, Guoqing
- Venue
- Chemico-Biological Interactions
- Publisher
- Elsevier BV
- Published
- 2019-08
- Volume
- 309
- Pages
- 108675
- ISSN
- 0009-2797 (ISSN-L)
- OpenAlex
- W2946874767
- Cited by
- 44
- References
- 1
- Citations by year
- 2026: 7 · 2025: 9 · 2024: 4 · 2023: 7 · 2022: 7 · 2021: 6 · 2020: 3 · 2019: 1
- FWCI
- 2.71
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Chemico-Biological Interactions (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Natural Science Foundation of China (81773797)
- Fundamental Research Funds for the Central Universities (1515219051)
- Second Military Medical University (2018QN17)
- Topics
- Health Sciences › Medicine › Hepatology › Liver physiology and pathology
- Life Sciences › Pharmacology, Toxicology and Pharmaceutics › Pharmacology › Drug-Induced Hepatotoxicity and Protection
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Plant-derived Lignans Synthesis and Bioactivity
- Keywords
- schisandrin B, liver fibrosis, carbon tetrachloride, Schisandra chinensis, differentially expressed genes, extracellular matrix deposition, endoplasmic reticulum stress, apoptosis, PPAR signaling, glutathione metabolism, hepatoprotection, traditional Chinese medicine
- MeSH terms
- Animals, Carbon Tetrachloride, Liver, Liver Cirrhosis, Male, Medicine, Chinese Traditional, Polycyclic Compounds, RNA, Signal Transduction, Down-Regulation, Up-Regulation, Rats, Wistar, Apoptosis, Sequence Analysis, RNA, Lignans, Gene Expression Profiling, Schisandra, Cyclooctanes, Rats, Transcriptome, Endoplasmic Reticulum Stress
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