Trio exome sequencing identified a novel de novo WASF1 missense variant leading to recurrent site substitution in a Chinese patient with developmental delay, microcephaly, and early-onset seizures: A mutational hotspot p.Trp161 and literature review
Abstract
Background Neurodevelopmental disorder with absent language and variable seizures (NEDALVS, OMIM # 618707) is a newly described autosomal dominant condition caused by heterozygous de novo mutation in WASF1 gene. WASF1 is a key component of the WAVE regulatory complex (WRC) required for actin polymerization. So far, only 3 distinct truncating variants clustering at the WCA domain, 3 missense variants localized to the meander region and a copy number variant (CNV) of WASF1 have been identified among 11 NEDALVS cases previously reported. Case report We report a pediatric patient carrying novel de novo heterozygous missense variant (NM_003931.2: c.481T > C, p.Trp161Arg) in WASF1 gene. During the first hospitalization at age of 5.5 months, the patient was initially diagnosed with infantile spasms, developmental delay (DD) and microcephaly due to nodding-like epileptic spasms in clusters and hypsarrhythmia on video-electroencephalography, lacking head control and body rollover, and abnormal head circumference 39 cm ( Literature review All the reported NEDALVS cases published in the PubMed English literature were reviewed to summarize the genetic and phenotypic spectrum of this novel disorder. Conclusion We describe the third patient with a recurrently mutated amino acid site at p.Trp161 in WASF1, currently the 12th patient with NEDALVS. This hotspot missense variant and the truncating variants in WASF1 lead to similar phenotypic patterns with core features of severe DD/ID, and seiz…
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The p.Trp161Arg variant in WASF1, resulting from either c.481T > A or c.481T > C, causes similar phenotypes in two independent patients: intellectual disability, developmental delay, epilepsy, and microcephaly.
“The phenotypes of two independent patients, each carrying the p.Trp161Arg variant in WASF1 resulting from distinct genomic alterations—either c.481T > A95 or c.481T > C102—are similar, displaying ID, DD, epilepsy, and microcephaly.”
From The WAVE complex in developmental and adulthood brain disorders (2025) · cites this paper as [102]
Microcephaly, which is not observed in WASF1 KO mice, manifested in two monozygotic twins with a deletion spanning GPR6 and exons 8-10 of WASF1, and in two independent patients harboring the p.Trp161Arg variant.
“Interestingly, microcephaly, which is not observed in KO mice, manifested in two monozygotic twins with a deletion spanning the entire GPR6 gene and exons 8–10 of WASF195, as well as in two independent patients harboring the identical missense variant p.Trp161Arg95,102.”
From The WAVE complex in developmental and adulthood brain disorders (2025) · cites this paper as [102]
Cites
Richards, S., Aziz, N., Bale, S., Bick, D., Das, S., Gastier-Foster, J., Grody, W. W., Hegde, M., Lyon, E., Spector, E., et al. (2015) · Genetics in Medicine · doi:10.1038/gim.2015.30 · Cited by 32,594 · see citing works
Satterstrom, F. K., Kosmicki, J. A., Wang, J., Breen, M. S., De Rubeis, S., An, J.-Y., Peng, M., Collins, R., Grove, J., Klei, L., et al. (2020) · Cell · doi:10.1016/j.cell.2019.12.036 · Cited by 2,321 · see citing works
Self-citationHigh Rate of Recurrent De Novo Mutations in Developmental and Epileptic Encephalopathies
Hamdan, F. F., Myers, C. T., Cossette, P., Lemay, P., Spiegelman, D., Laporte, A. D., Nassif, C., Diallo, O., Monlong, J., Cadieux-Dion, M., et al. (2017) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2017.09.008 · Cited by 445 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
The WAVE complex in developmental and adulthood brain disorders
Kim, H.-G., Berdasco, C., Nairn, A. C., & Kim, Y. (2025) · Experimental & Molecular Medicine · doi:10.1038/s12276-024-01386-w · Cited by 8 · see citing works
- Authors
- Zhao, A., Zhou, R., Gu, Q., Liu, M., Zhang, B., Huang, J., Yang, B., Yao, R., Wang, J., Lv, H., Wang, J., Shen, Y., Wang, H., & Chen, X.
- Affiliations
- Soochow University (CN)
- Shanghai Jiao Tong University (CN)
- Boston Children's Hospital (US)
- Corresponding author
- Wang, Hongying
- Chen, Xuqin
- ORCID
- Venue
- Clinica Chimica Acta
- Publisher
- Elsevier BV
- Published
- 2021-12
- Volume
- 523
- Pages
- 10-18
- ISSN
- 0009-8981 (ISSN-L)
- OpenAlex
- W3196654945
- Cited by
- 10
- References
- 3
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 2 · 2023: 3 · 2022: 2
- FWCI
- 0.99
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- Locations
- Clinica Chimica Acta (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetics and Neurodevelopmental Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genomics and Rare Diseases
- Health Sciences › Medicine › Psychiatry and Mental health › Epilepsy research and treatment
- Keywords
- de novo missense variant, mutational hotspots, WAVE regulatory complex, actin polymerization, developmental delay, microcephaly, early-onset seizures, infantile spasms, hypsarrhythmia, hypotonia, genetic diagnosis, mutation spectrum
- MeSH terms
- Child, China, Humans, Infant, Language, Intellectual Disability, Microcephaly, Mutation, Seizures, Wiskott-Aldrich Syndrome Protein Family, Exome
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review