Meta-Analysis of the Alzheimer’s Disease Human Brain Transcriptome and Functional Dissection in Mouse Models

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28. Identification of Genes with Altered Roles in Transcription Network in Alzheimer's Disease
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29. Integration of proteomics and metabolomics – insights into inflammation, metabolic dysregulation, and vascular aspects in AD
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30. Role of Animal Models in Alzheimer’s Disease Drug Development
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31. Review of Co-Morbid Mechanisms of Alzheimer’s Disease and Type 2 Diabetes
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32. Transcriptional landscape of human microglia reveals robust gene expression signatures that implicates age, sex and APOE -related immunometabolic pathway perturbations
    Tulsi Patel, Troy Carnwath, Xue Wang, Mariet Allen, Sarah Lincoln, Laura J. Lewis‐Tuffin, Zachary Quicksall, Shu Lin, Frederick Q Tutor‐New, Charlotte C.G. Ho et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
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35. A Continuous Extension of Gene Set Enrichment Analysis using the Likelihood Ratio Test Statistics Identifies VEGF as a Candidate Pathway for Alzheimer’s disease
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36. Urolithin A ve yaşlı sağlığına güncel yaklaşım
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38. Additional file 4 of SETD7-mediated monomethylation is enriched on soluble Tau in Alzheimer’s disease
    Maria Bichmann, Nuria Prat Oriol, Ebru Ercan-Herbst, David C. Schöndorf, Borja Gomez Ramos, Vera Schwärzler, Neu, Marie, Annabelle Schlüter, Xue Wang, Liang Jin et al. · 2021 · Figshare
39. Systems genetic dissection of Alzheimer’s disease brain gene expression networks
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40. Mitochondrial energy production genes affecting reactive oxygen species and ATP synthesis, inflammatory pathways, and neuron viability are differentially expressed in brains of Alzheimer's disease patients
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42. Metabolic Trans-Omic Analysis Reveals Key Regulatory Disruption of Energy Metabolism in Alzheimer’s Disease
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45. Trem2 R47H and reduced TREM2 expression both mimic human Alzheimer’s disease signatures in mice
    T. Abel, Ravi S. Pandey, Annat Haber, Dylan T. Garceau, Michael Sasner, Kevin P. Kotredes, Gregory A. Cary, Adrian L. Oblak, Gareth R. Howell, Bruce T. Lamb et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
46. Additional file 1 of miR-129-5p as a biomarker for pathology and cognitive decline in Alzheimer’s disease
    Han, Sang-Won, Pyun, Jung-Min, Paula J. Bice, Bennett, David A., Andrew J. Saykin, Kim, Sang Yun, Young Ho Park, Kwangsik T. Nho · 2024 · Figshare
47. Additional file 2 of SETD7-mediated monomethylation is enriched on soluble Tau in Alzheimer’s disease
    Maria Bichmann, Prat Oriol, Nuria, Ebru Ercan-Herbst, David C. Schöndorf, Gomez Ramos, Borja, Vera Schwärzler, Marie Astrid Neu, Annabelle Schlüter, Wang, Xue, Liang Jin et al. · 2021 · Figshare
48. Additional file 5 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
49. Additional file 10 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
50. Additional file 3 of SETD7-mediated monomethylation is enriched on soluble Tau in Alzheimer’s disease
    Maria Bichmann, Prat Oriol, Nuria, Ebru Ercan-Herbst, David C. Schöndorf, Gomez Ramos, Borja, Vera Schwärzler, Marie Astrid Neu, Annabelle Schlüter, Wang, Xue, Jin, Liang et al. · 2021 · Figshare
51. Additional file 17 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
52. Additional file 7 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
53. Additional file 3 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
54. Additional file 16 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
55. Additional file 18 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
56. Additional file 1 of Integrated analysis of the aging brain transcriptome and proteome in tauopathy
    Carl Grant Mangleburg, Timothy Wu, Hari Krishna Yalamanchili, Caiwei Guo, Hsieh, Yi-Chen, Duong, Duc M., Eric B. Dammer, Philip L. De Jager, Nicholas T. Seyfried, Zhandong Liu et al. · 2020 · Figshare
57. Additional file 2 of miR-129-5p as a biomarker for pathology and cognitive decline in Alzheimer’s disease
    Han, Sang-Won, Pyun, Jung-Min, Paula J. Bice, Bennett, David A., Andrew J. Saykin, Kim, Sang Yun, Young Ho Park, Kwangsik Nho · 2024 · Figshare
58. Additional file 12 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
59. Additional file 1 of Genome-wide analysis identifies a novel LINC-PINT splice variant associated with vascular amyloid pathology in Alzheimer’s disease
    Joseph S. Reddy, Mariet Allen, Charlotte C.G. Ho, Stephanie R. Oatman, Özkan İş, Zachary Quicksall, Xue Wang, Jin, Jiangli, Patel, Tulsi A., Troy Carnwath et al. · 2021 · Figshare
60. Additional file 6 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
61. Additional file 2 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
62. Additional file 9 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
63. Additional file 14 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
64. Additional file 1 of SETD7-mediated monomethylation is enriched on soluble Tau in Alzheimer’s disease
    Maria Bichmann, Prat Oriol, Nuria, Ebru Ercan-Herbst, David C. Schöndorf, Gomez Ramos, Borja, Vera Schwärzler, Marie Astrid Neu, Annabelle Schlüter, Wang, Xue, Jin, Liang et al. · 2021 · Figshare
65. Additional file 13 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
66. Additional file 15 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
67. Additional file 4 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
68. Additional file 8 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
69. Additional file 11 of A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques
    Kristine M. Tran, Shimako Kawauchi, Enikö A. Kramár, Narges Rezaie, Heidi Yahan Liang, Jasmine Sakr, Ángela Gómez-Arboledas, Miguel A. Arreola, Celia Da Cunha, Jimmy Phan et al. · 2023 · Figshare
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