Outer Membrane Vesicles of a Human Commensal Mediate Immune Regulation and Disease Protection

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1. Bacteroides thetaiotaomicron-derived outer membrane vesicles promote regulatory dendritic cell responses in health but not in inflammatory bowel disease
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2. Outer Membrane Vesicles: Biogenesis, Functions, and Issues
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3. Bacterial extracellular vesicles: Understanding biology promotes applications as nanopharmaceuticals
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4. Activation of Immune and Defense Responses in the Intestinal Mucosa by Outer Membrane Vesicles of Commensal and Probiotic Escherichia coli Strains
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5. Macropinocytosis: New Insights Into Its Underappreciated Role in Innate Immune Cell Surveillance
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6. Isolation of Anti-Inflammatory and Epithelium Reinforcing Bacteroides and Parabacteroides Spp. from A Healthy Fecal Donor
   Kaisa Hiippala, Veera Kainulainen, Maiju Suutarinen, Tuomas Heini, Jolene R. Bowers, Daniel E. Jasso‐Selles, Darrin Lemmer, Michael Valentine, Riley Barnes, David M. Engelthaler et al. · 2020 · Nutrients
7. Versatile effects of bacterium-released membrane vesicles on mammalian cells and infectious/inflammatory diseases
   You-Jiang Yu, Xiaohong Wang, Guo‐Chang Fan · 2017 · Acta Pharmacologica Sinica
8. Bioengineering commensal bacteria‐derived outer membrane vesicles for delivery of biologics to the gastrointestinal and respiratory tract
   Ana L. Carvalho, Sónia Fonseca, Ariadna Miquel-Clopés, Kathryn L. Cross, K.H. Kok, Udo Wegmann, Katherine Gil‐Cardoso, Eleanor G. Bentley, Sanaria Al Katy, Janine L. Coombes et al. · 2019 · Journal of Extracellular Vesicles
9. The metabolic role of the gut microbiota in health and rheumatic disease: mechanisms and interventions
   Shahla Abdollahi‐Roodsaz, Steven B. Abramson, José U. Scher · 2016 · Nature Reviews Rheumatology
10. Host/microbiota interactions in health and diseases—Time for mucosal microbiology!
    Noëmie Daniel, Emelyne Lécuyer, Benoît Chassaing · 2021 · Mucosal Immunology
11. Diverse Intestinal Bacteria Contain Putative Zwitterionic Capsular Polysaccharides with Anti-inflammatory Properties
    Charles Preston Neff, Matthew E. Rhodes, Kathleen L. Arnolds, Colm B. Collins, Jody M. Donnelly, Nichole M. Nusbacher, Paul Jedlicka, Jennifer M. Schneider, Martin D. McCarter, Michael Shaffer et al. · 2016 · Cell Host & Microbe
12. Outer membrane vesicles secreted by pathogenic and nonpathogenic Bacteroides fragilis represent different metabolic activities
    Natalya B. Zakharzhevskaya, Anna Vanyushkina, Ilya A. Altukhov, Aleksey Leonidovich Shavarda, Ivan Butenko, Daria V. Rakitina, Anastasia S. Nikitina, Alexander I. Manolov, Alina N. Egorova, Eugene E. Kulikov et al. · 2017 · Scientific Reports
13. Regulatory Dendritic Cells, T Cell Tolerance, and Dendritic Cell Therapy for Immunologic Disease
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14. Extracellular vesicles and particles impact the systemic landscape of cancer
    Serena Lucotti, Candia M. Kenific, Haiying Zhang, David C. Lyden · 2022 · The EMBO Journal
15. Outer Membrane Vesicles from the Probiotic Escherichia coli Nissle 1917 and the Commensal ECOR12 Enter Intestinal Epithelial Cells via Clathrin-Dependent Endocytosis and Elicit Differential Effects on DNA Damage
    María-Alexandra Cañas, Rosa Gíménez, María-José Fábrega, Lorena Toloza, Laura Baldomà, Josefa Badı́a · 2016 · PLoS ONE
16. The Protective Role of Bacteroides fragilis in a Murine Model of Colitis-Associated Colorectal Cancer
    Yun Kyung Lee, Parpi Mehrabian, Silva Boyajian, Wei-Li Wu, Jane Selicha, Steven L. Vonderfecht, Sarkis K. Mazmanian · 2018 · mSphere
17. Calorie restriction slows age-related microbiota changes in an Alzheimer’s disease model in female mice
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18. Outer Membrane Lipid Secretion and the Innate Immune Response to Gram-Negative Bacteria
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19. A Budding Relationship: Bacterial Extracellular Vesicles in the Microbiota-Gut-Brain Axis
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20. Symbionts exploit complex signaling to educate the immune system
    Erturk-Hasdemir, Deniz, Oh, Sungwhan F., Okan, Nihal A., Stefanetti, Giuseppe, Gazzaniga, Francesca S., Seeberger, Peter H., Plevy, Scott E., Kasper, Dennis L. · 2019 · Proceedings of the National Academy of Sciences
21. The microbiome and tuberculosis: state of the art, potential applications, and defining the clinical research agenda
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22. Role of Microbiota-Derived Extracellular Vesicles in Gut-Brain Communication
    Carlos M. Cuesta, Consuelo Guerri, Juán Ureña, María Pascual · 2021 · International Journal of Molecular Sciences
23. Microbiota-Derived Extracellular Vesicles as New Systemic Regulators
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24. A potential species of next-generation probiotics? The dark and light sides of Bacteroides fragilis in health
    Fengting Sun, Qingsong Zhang, Jianxin Zhao, Hao Zhang, Qixiao Zhai, Wei Chen · 2019 · Food Research International
25. Microbiota and host immune responses: a love–hate relationship
    Sarah Tomkovich, Christian Jobin · 2015 · Immunology
26. Gut bacterial extracellular vesicles: important players in regulating intestinal microenvironment
    Xiao Huan Liang, Nini Dai, Kangliang Sheng, Hengqian Lu, Jingmin Wang, Liping Chen, Yongzhong Wang · 2022 · Gut Microbes
27. Absence of Metalloprotease GP63 Alters the Protein Content of Leishmania Exosomes
    Kasra Hassani, Marina Tiemi Shio, Caroline Martel, Denis Faubert, Martin Olivier · 2014 · PLoS ONE
28. Posttraumatic stress disorder: does the gut microbiome hold the key?
    Leclercq, Sophie, Forsythe, Paul, Bienenstock, John · 2016 · The Canadian Journal of Psychiatry
29. Sources and Functions of Extracellular Small RNAs in Human Circulation
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30. A Subset of Polysaccharide Capsules in the Human Symbiont Bacteroides thetaiotaomicron Promote Increased Competitive Fitness in the Mouse Gut
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31. Deciphering interactions between the gut microbiota and the immune system via microbial cultivation and minimal microbiomes
    Thomas Clavel, João Carlos Gomes Neto, Ilias Lagkouvardos, Amanda E. Ramer‐Tait · 2017 · Immunological Reviews
32. CRIg+ Macrophages Prevent Gut Microbial DNA–Containing Extracellular Vesicle–Induced Tissue Inflammation and Insulin Resistance
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33. Intestinal microbiota and its effects on the immune system
    María Rescigno · 2014 · Cellular Microbiology
34. The maternal gut microbiome during pregnancy and offspring allergy and asthma
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35. Bacteroides fragilis Prevents Clostridium difficile Infection in a Mouse Model by Restoring Gut Barrier and Microbiome Regulation
    Huimin Deng, Siqi Yang, Yucheng Zhang, Kai Qian, Zhaohui Zhang, Yangyang Liu, Ye Wang, Yang Bai, Hongying Fan, Xinmei Zhao et al. · 2018 · Frontiers in Microbiology
36. Dysbiotic microbiota interactions in Crohn’s disease
    Esther Caparrós, Reiner Wiest, Michael M. Scharl, Gerhard Rogler, Ana Gutiérrez, Bahtiyar Yılmaz, Marcin Wawrzyniak, Rubén Francés · 2021 · Gut Microbes
37. Relationship between gut microbiota and development of T cell associated disease
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38. A Bacterial Homolog of a Eukaryotic Inositol Phosphate Signaling Enzyme Mediates Cross-kingdom Dialog in the Mammalian Gut
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39. Luminal Extracellular Vesicles (EVs) in Inflammatory Bowel Disease (IBD) Exhibit Proinflammatory Effects on Epithelial Cells and Macrophages
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40. Probiotic Escherichia coli Nissle 1917-derived outer membrane vesicles enhance immunomodulation and antimicrobial activity in RAW264.7 macrophages
    Rujiu Hu, Hua Lin, Jing Li, Yuezhen Zhao, Mimi Wang, Xiaoqin Sun, Yuna Min, Yupeng Gao, Mingming Yang · 2020 · BMC Microbiology
41. Engineered bacterial membrane vesicles are promising carriers for vaccine design and tumor immunotherapy
    Qiong Long, Peng Zheng, Xiao Wei Zheng, Weiran Li, Liangqun Hua, Zhongqian Yang, Weiwei Huang, Yanbing Ma · 2022 · Advanced Drug Delivery Reviews
42. Deciphering the tête-à-tête between the microbiota and the immune system
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43. Understanding How Commensal Obligate Anaerobic Bacteria Regulate Immune Functions in the Large Intestine
    Eva Maier, Rachel Claire Anderson, Nicole Clemence Roy · 2014 · Nutrients
44. Outer membrane vesicles containing signalling molecules and active hydrolytic enzymes released by a coral pathogen Vibrio shilonii AK1
    Jie Li, Farooq Azam, Si Zhang · 2016 · Environmental Microbiology
45. Host immunity and cellular responses to bacterial outer membrane vesicles
    Varnesh Tiku, Man‐Wah Tan · 2021 · Trends in Immunology
46. The gut microbiota in cancer immunity and immunotherapy
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47. Current understanding of the role of Adipose-derived Extracellular Vesicles in Metabolic Homeostasis and Diseases: Communication from the distance between cells/tissues
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48. The gut–brain axis in irritable bowel syndrome and inflammatory bowel disease
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49. Extracellular vesicles produced by the human commensal gut bacterium Bacteroides thetaiotaomicron affect host immune pathways in a cell‐type specific manner that are altered in inflammatory bowel disease
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50. Immunity, microbiota and kidney disease
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51. Genetic regulation of vesiculogenesis and immunomodulation in Mycobacterium tuberculosis
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52. Surface Exposure and Packing of Lipoproteins into Outer Membrane Vesicles Are Coupled Processes in Bacteroides
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53. Helicobacter pylori outer membrane vesicles involvement in the infection development and Helicobacter pylori-related diseases
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54. Outer membrane vesicles blebbing contributes to B. vulgatus mpk-mediated immune response silencing
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55. Effects of gut microbiota–derived extracellular vesicles on obesity and diabetes and their potential modulation through diet
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56. Exopolysaccharide from Bacillus subtilis Induces Anti-Inflammatory M2 Macrophages That Prevent T Cell–Mediated Disease
    Mallory L Paynich, Sara E. Jones-Burrage, Katherine L. Knight · 2017 · The Journal of Immunology
57. Commensal bacteria-derived extracellular vesicles suppress ulcerative colitis through regulating the macrophages polarization and remodeling the gut microbiota
    Liping Liang, Chenghai Yang, Le Liu, Genghui Mai, Haolin Li, Lele Wu, Ming Jin, Ye Chen · 2022 · Microbial Cell Factories
58. Bacterial extracellular vesicles-based therapeutic strategies for bone and soft tissue tumors therapy
    Han Liu, Hao Zhang, Yafei Han, Yan Hu, Zhen Geng, Jiacan Su · 2022 · Theranostics
59. Mucosal tissue regulatory T cells are integral in balancing immunity and tolerance at portals of antigen entry
    Brianna R. Traxinger, Laura E. Richert-Spuhler, Jennifer M. Lund · 2021 · Mucosal Immunology
60. Bifidobacteria and humans: our special friends, from ecological to genomics perspectives
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61. Dietary protein increases T-cell-independent sIgA production through changes in gut microbiota-derived extracellular vesicles
    Jian Tan, Duan Ni, Jemma Taitz, Gabriela Veronica Pinget, Mark Norman Read, Alistair McNair Senior, Jibran A. Wali, Reem Elnour, Erin Rose Shanahan, Huiling Wu et al. · 2022 · Nature Communications
62. Next-Generation Probiotics for Inflammatory Bowel Disease
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63. An antimicrobial protein of the gut symbiont B acteroides fragilis with a MACPF domain of host immune proteins
    Maria Chatzidaki‐Livanis, Michael J. Coyne, Laurie E. Comstock · 2014 · Molecular Microbiology
64. Bacteroides ovatus Promotes IL-22 Production and Reduces Trinitrobenzene Sulfonic Acid–Driven Colonic Inflammation
    Faith D. Ihekweazu, Melinda Anne Engevik, Wenly H. Ruan, Zhongcheng Shi, Robert Fultz, Kristen A. Engevik, Alexandra L. Chang‐Graham, Jasmin Freeborn, Evelyn S. Park, Susan F. Venable et al. · 2021 · American Journal Of Pathology
65. Natural and engineered bacterial outer membrane vesicles
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66. In vitro resistance mechanisms of N eisseria meningitidis against neutrophil extracellular traps
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67. Helicobacter pylori infection is associated with an altered gastric microbiota in children
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68. sncRNAs packaged by Helicobacter pylori outer membrane vesicles attenuate IL-8 secretion in human cells
    Hongxia Zhang, Yingxuan Zhang, Zifan Song, Ruizhen Li, Huan Ruan, Qiong Liu, Xiaotian Huang · 2019 · International Journal of Medical Microbiology
69. Analysis of the human breast milk microbiome and bacterial extracellular vesicles in healthy mothers
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70. Intestinal microbiota and diabetic kidney diseases: the Role of microbiota and derived metabolites inmodulation of renal inflammation and disease progression
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71. The role and mechanisms of gram-negative bacterial outer membrane vesicles in inflammatory diseases
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72. Extracellular vesicles of the Gram-positive gut symbiont Bifidobacterium longum induce immune-modulatory, anti-inflammatory effects
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73. Enterobacteria-secreted particles induce production of exosome-like S1P-containing particles by intestinal epithelium to drive Th17-mediated tumorigenesis
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74. The gut microbiome and microbial translocation in multiple sclerosis
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75. Maternal microbiota communicates with the fetus through microbiota-derived extracellular vesicles
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76. The gut microbiome and Alzheimer’s disease: Complex and bidirectional interactions
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77. Ursodeoxycholic acid improves liver function via phenylalanine/tyrosine pathway and microbiome remodelling in patients with liver dysfunction
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78. Accumulation of microbial DNAs promotes to islet inflammation and β cell abnormalities in obesity in mice
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79. Biochemical Features of Beneficial Microbes: Foundations for Therapeutic Microbiology
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80. Comparative study of effect of Akkermansia muciniphila and its extracellular vesicles on toll-like receptors and tight junction.
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81. TLR2-Dependent Activation of β-Catenin Pathway in Dendritic Cells Induces Regulatory Responses and Attenuates Autoimmune Inflammation
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82. Immunomodulation by Gut Microbiota: Role of Toll-Like Receptor Expressed by T Cells
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83. Helicobacter pylori-Derived Outer Membrane Vesicles (OMVs): Role in Bacterial Pathogenesis?
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84. Bacterial outer membrane vesicles and host cell death signaling
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85. Corrigendum: Bacteroides fragilis Prevents Clostridium difficile Infection in a Mouse Model by Restoring Gut Barrier and Microbiome Regulation
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86. Human gut bacteria tailor extracellular vesicle cargo for the breakdown of diet- and host-derived glycans
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87. Infection with Bacteroides Phage BV01 Alters the Host Transcriptome and Bile Acid Metabolism in a Common Human Gut Microbe
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88. In Schizophrenia, Increased Plasma IgM/IgA Responses to Gut Commensal Bacteria Are Associated with Negative Symptoms, Neurocognitive Impairments, and the Deficit Phenotype
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89. Metabolites as extracellular vesicle cargo in health, cancer, pleural effusion, and cardiovascular diseases: An emerging field of study to diagnostic and therapeutic purposes
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90. Microbiome Diversity and Asthma and Allergy Risk
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91. Fusobacterium nucleatum Extracellular Vesicles Modulate Gut Epithelial Cell Innate Immunity via FomA and TLR2
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92. Microbiota-mediated protection against antibiotic-resistant pathogens
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93. Bacterial membrane vesicles as novel nanosystems for drug delivery
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94. Human intestinal metagenomics: state of the art and future
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95. A new horizon of precision medicine: combination of the microbiome and extracellular vesicles
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96. Mapping bacterial extracellular vesicle research: insights, best practices and knowledge gaps
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97. Biomimetic Nanoparticles Coated with Bacterial Outer Membrane Vesicles as a New-Generation Platform for Biomedical Applications
    Atanu Naskar, Hyejin Cho, Sohee Lee, Kwang-sun Kim · 2021 · Pharmaceutics
98. Bacterial extracellular vesicles: A position paper by the microbial vesicles task force of the Chinese society for extracellular vesicles
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99. Exosomes on the border of species and kingdom intercommunication
    Christina Maria Anna Pia Schuh, Jimena Cuenca, Francisca Alcayaga‐Miranda, Maroun Khoury · 2019 · Translational research
100. Bacterial Extracellular Vesicles and the Gut‐Microbiota Brain Axis: Emerging Roles in Communication and Potential as Therapeutics
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