Cited by 32Cellular transport and secretionIon Channels and ReceptorsEndoplasmic Reticulum Stress and Disease

The ER ladder is a unique morphological feature of developing mammalian axons

Open access
Zamponi, Emiliano, Meehl, Janet B., Voeltz, Gia K.·2022·Developmental Cell

Abstract

The endoplasmic reticulum (ER) confronts a challenge to accommodate long, smooth ER tubules into the structural complexity of the axonal compartment. Here, we describe a morphological feature for the axonal ER network in developing neurons we termed the ER ladder. Axonal ER ladders are composed of rungs that wrap tightly around the microtubule bundle and dynamic rails, which slide across microtubules. We found that the ER-shaping protein Reticulon 2 determines the architecture and dynamics of the axonal ER ladder by modulating its interaction with microtubules. Moreover, we show that ER ladder depletion impairs the trafficking of associated vesicular axonal cargoes. Finally, we demonstrate that stromal interaction molecule 1 (Stim1) localizes to ER rungs and translocates to ER-plasma membrane contact sites upon depletion of luminal Ca 2+ . Our findings uncover fundamental insights into the structural and functional organization of the axonal ER network in developing mammalian neurons.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.devcel.2022.05.002

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Several studies have imaged neuronal processes by cryo-EM and cryo-ET, showing neurites are accessible to cryogenic imaging but persistent challenges remain at molecular resolution due to poor contrast and cytoplasmic denseness.

    “Several studies have imaged neuronal processes by cryo-EM and cryo-ET19–25, showing that neurites are accessible to cryogenic imaging, while also revealing persistent challenges in obtaining information at a molecular resolution due to poor contrast and cytoplasmic denseness.”

    From Ghost Neuron preparation unlocks high-resolution structural mapping of intracellular architecture in axons (2026) · cites this paper as [24]

    The Results (page unavailable) describe cryo-ET imaging of developing axons and visualization of their structures at nanometer resolution, supporting the claim that neuronal processes are accessible to cryogenic imaging. The paper does not attribute difficulty obtaining molecular-resolution information to poor contrast or cytoplasmic denseness; its comment about poor resolution concerns conventional TEM instead. (LLM, conf=0.84)

    Experimental — accuracy not yet measured

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Research works printed but not linked: 48

  1. [2]2. Baloh, R.H. ∙ Schmidt, R.E. ∙ Pestronk, A. ... Altered axonal mitochondrial transport in the pathogenesis of Charcot-Marie-Tooth disease from mitofusin 2 mutations J. Neurosci. 2007; 27:422-430 Crossref Scopus (360) PubMed Google Scholar
  2. [3]3. Bilsland, L.G. ∙ Sahai, E. ∙ Kelly, G. ... Deficits in axonal transport precede ALS symptoms in vivo Proc. Natl. Acad. Sci. USA. 2010; 107:20523-20528 Crossref Scopus (320) PubMed Google Scholar
  3. [4]4. Blackstone, C. Converging cellular themes for the hereditary spastic paraplegias Curr. Opin. Neurobiol. 2018; 51:139-146 Crossref Scopus (87) PubMed Google Scholar
  4. [5]5. Branon, T.C. ∙ Bosch, J.A. ∙ Sanchez, A.D. ... Efficient proximity labeling in living cells and organisms with TurboID Nat. Biotechnol. 2018; 36:880-887 Crossref Scopus (924) PubMed Google Scholar
  5. [6]6. Cui-Wang, T. ∙ Hanus, C. ∙ Cui, T. ... Local zones of endoplasmic reticulum complexity confine cargo in neuronal dendrites Cell. 2012; 148:309-321 Full Text Full Text (PDF) Scopus (162) PubMed Google Scholar
  6. [7]7. Damenti, M. ∙ Coceano, G. ∙ Pennacchietti, F. ... STED and parallelized RESOLFT optical nanoscopy of the tubular endoplasmic reticulum and its mitochondrial contacts in neuronal cells Neurobiol. Dis. 2021; 155:105361 Crossref Scopus (22) PubMed Google Scholar
  7. [8]8. de Juan-Sanz, J. ∙ Holt, G.T. ∙ Schreiter, E.R. ... Axonal endoplasmic reticulum Ca2+ content controls release probability in CNS nerve terminals Neuron. 2017; 93:867-881.e6 Full Text Full Text (PDF) Scopus (178) PubMed Google Scholar
  8. [9]9. Farías, G.G. ∙ Fréal, A. ∙ Tortosa, E. ... Feedback-driven mechanisms between microtubules and the endoplasmic reticulum instruct neuronal polarity Neuron. 2019; 102:184-201.e8 Full Text Full Text (PDF) Scopus (61) PubMed Google Scholar
  9. [10]10. Fernandopulle, M.S. ∙ Lippincott-Schwartz, J. ∙ Ward, M.E. RNA transport and local translation in neurodevelopmental and neurodegenerative disease Nat. Neurosci. 2021; 24:622-632 Crossref Scopus (76) PubMed Google Scholar
  10. [12]12. Friedman, J.R. ∙ Dibenedetto, J.R. ∙ West, M. ... Endoplasmic reticulum-endosome contact increases as endosomes traffic and mature Mol. Biol. Cell. 2013; 24:1030-1040 Crossref Scopus (225) PubMed Google Scholar
  11. [13]13. Friedman, J.R. ∙ Lackner, L.L. ∙ West, M. ... ER tubules mark sites of mitochondrial division Science. 2011; 334:358-362 Crossref Scopus (1516) PubMed Google Scholar
  12. [14]14. Friedman, J.R. ∙ Webster, B.M. ∙ Mastronarde, D.N. ... ER sliding dynamics and ER-mitochondrial contacts occur on acetylated microtubules J. Cell Biol. 2010; 190:363-375 Crossref Scopus (300) PubMed Google Scholar
  13. [15]15. Grigoriev, I. ∙ Gouveia, S.M. ∙ van der Vaart, B. ... STIM1 is a MT-plus-end-tracking protein involved in remodeling of the ER Curr. Biol. 2008; 18:177-182 Full Text Full Text (PDF) Scopus (352) PubMed Google Scholar
  14. [16]16. Grimm, J.B. ∙ Brown, T.A. ∙ English, B.P. ... Synthesis of Janelia fluor HaloTag and SNAP-tag ligands and their use in cellular imaging experiments Methods Mol. Biol. 2017; 1663:179-188 Crossref Scopus (60) PubMed Google Scholar
  15. [19]19. Hoffmann, P.C. ∙ Giandomenico, S.L. ∙ Ganeva, I. ... Electron cryo-tomography reveals the subcellular architecture of growing axons in human brain organoids Elife. 2021; 10:e70269 Crossref Scopus (20) PubMed Google Scholar
  16. [20]20. Hu, J. ∙ Shibata, Y. ∙ Voss, C. ... Membrane proteins of the endoplasmic reticulum induce high-curvature tubules Science. 2008; 319:1247-1250 Crossref Scopus (363) PubMed Google Scholar
  17. [21]21. Kremer, J.R. ∙ Mastronarde, D.N. ∙ McIntosh, J.R. Computer visualization of three-dimensional image data using IMOD J. Struct. Biol. 1996; 116:71-76 Crossref Scopus (4020) PubMed Google Scholar
  18. [23]23. Lee, J.E. ∙ Westrate, L.M. ∙ Wu, H. ... Multiple dynamin family members collaborate to drive mitochondrial division Nature. 2016; 540:139-143 Crossref Scopus (380) PubMed Google Scholar
  19. [24]24. Lee, S. ∙ Wang, W. ∙ Hwang, J. ... Increased ER-mitochondria tethering promotes axon regeneration Proc. Natl. Acad. Sci. USA. 2019; 116:16074-16079 Crossref Scopus (49) PubMed Google Scholar
  20. [25]25. Lindhout, F.W. ∙ Cao, Y. ∙ Kevenaar, J.T. ... VAP-SCRN1 interaction regulates dynamic endoplasmic reticulum remodeling and presynaptic function EMBO J. 2019; 38:e101345 Crossref Scopus (40) PubMed Google Scholar
  21. [26]26. Liou, J. ∙ Kim, M.L. ∙ Heo, W.D. ... STIM is a Ca2+ sensor essential for Ca2+-store-depletion-triggered Ca2+ influx Curr. Biol. 2005; 15:1235-1241 Full Text Full Text (PDF) Scopus (1833) PubMed Google Scholar
  22. [27]27. Liu, Y. ∙ Vidensky, S. ∙ Ruggiero, A.M. ... Reticulon RTN2B regulates trafficking and function of neuronal glutamate transporter EAAC1 J. Biol. Chem. 2008; 283:6561-6571 Full Text Full Text (PDF) Scopus (55) PubMed Google Scholar
  23. [28]28. Luik, R.M. ∙ Wang, B. ∙ Prakriya, M. ... Oligomerization of STIM1 couples ER calcium depletion to CRAC channel activation Nature. 2008; 454:538-542 Crossref Scopus (466) PubMed Google Scholar
  24. [29]29. Mastronarde, D.N. ∙ Held, S.R. Automated tilt series alignment and tomographic reconstruction in IMOD J. Struct. Biol. 2017; 197:102-113 Crossref Scopus (360) PubMed Google Scholar
  25. [31]31. Montenegro, G. ∙ Rebelo, A.P. ∙ Connell, J. ... Mutations in the ER-shaping protein reticulon 2 cause the axon-degenerative disorder hereditary spastic paraplegia type 12 J. Clin. Invest. 2012; 122:538-544 Crossref Scopus (137) PubMed Google Scholar
  26. [32]32. Muik, M. ∙ Frischauf, I. ∙ Derler, I. ... Dynamic coupling of the putative coiled-coil domain of ORAI1 with STIM1 mediates ORAI1 channel activation J. Biol. Chem. 2008; 283:8014-8022 Full Text Full Text (PDF) Scopus (360) PubMed Google Scholar
  27. [33]33. Özkan, N. ∙ Koppers, M. ∙ van Soest, I. ... ER - lysosome contacts at a pre-axonal region regulate axonal lysosome availability Nat. Commun. 2021; 12:4493 Crossref Scopus (30) PubMed Google Scholar
  28. [34]34. Öztürk, Z. ∙ O'Kane, C.J. ∙ Pérez-Moreno, J.J. Axonal endoplasmic reticulum dynamics and its roles in neurodegeneration Front. Neurosci. 2020; 14:48 Crossref Scopus (72) PubMed Google Scholar
  29. [35]35. Pavez, M. ∙ Thompson, A.C. ∙ Arnott, H.J. ... STIM1 is required for remodeling of the endoplasmic reticulum and microtubule cytoskeleton in steering growth cones J. Neurosci. 2019; 39:5095-5114 Crossref Scopus (36) PubMed Google Scholar
  30. [36]36. Prakriya, M. ∙ Feske, S. ∙ Gwack, Y. ... Orai1 is an essential pore subunit of the CRAC channel Nature. 2006; 443:230-233 Crossref Scopus (1163) PubMed Google Scholar
  31. [39]39. Saha, A.R. ∙ Hill, J. ∙ Utton, M.A. ... Parkinson's disease alpha-synuclein mutations exhibit defective axonal transport in cultured neurons J. Cell Sci. 2004; 117:1017-1024 Crossref Scopus (147) PubMed Google Scholar
  32. [40]40. Schindelin, J. ∙ Arganda-Carreras, I. ∙ Frise, E. ... Fiji: an open-source platform for biological-image analysis Nat. Methods. 2012; 9:676-682 Crossref Scopus (40013) PubMed Google Scholar
  33. [41]41. Shibata, Y. ∙ Shemesh, T. ∙ Prinz, W.A. ... Mechanisms determining the morphology of the peripheral ER Cell. 2010; 143:774-788 Full Text Full Text (PDF) Scopus (404) PubMed Google Scholar
  34. [42]42. Shibata, Y. ∙ Voss, C. ∙ Rist, J.M. ... The reticulon and DP1/Yop1p proteins form immobile oligomers in the tubular endoplasmic reticulum J. Biol. Chem. 2008; 283:18892-18904 Full Text Full Text (PDF) Scopus (264) PubMed Google Scholar
  35. [43]43. Shim, S. ∙ Zheng, J.Q. ∙ Ming, G.-L. A critical role for STIM1 in filopodial calcium entry and axon guidance Mol. Brain. 2013; 6:51 Crossref Scopus (25) PubMed Google Scholar
  36. [44]44. Tocheva, E.I. ∙ Li, Z. ∙ Jensen, G.J. Electron cryotomography Cold Spring Harb Perspect. Biol. 2010; 2:a003442 Crossref Scopus (63) PubMed Google Scholar
  37. [45]45. Voeltz, G.K. ∙ Prinz, W.A. ∙ Shibata, Y. ... A class of membrane proteins shaping the tubular endoplasmic reticulum Cell. 2006; 124:573-586 Full Text Full Text (PDF) Scopus (928) PubMed Google Scholar
  38. [46]46. Wada, F. ∙ Nakata, A. ∙ Tatsu, Y. ... Myosin va and endoplasmic reticulum calcium channel complex regulates membrane export during axon guidance Cell Rep. 2016; 15:1329-1344 Full Text Full Text (PDF) Scopus (24) PubMed Google Scholar
  39. [47]47. Waterman-Storer, C.M. ∙ Salmon, E.D. Endoplasmic reticulum membrane tubules are distributed by microtubules in living cells using three distinct mechanisms Curr. Biol. 1998; 8:798-806 Full Text Full Text (PDF) PubMed Google Scholar
  40. [48]48. West, M. ∙ Zurek, N. ∙ Hoenger, A. ... A 3D analysis of yeast ER structure reveals how ER domains are organized by membrane curvature J. Cell Biol. 2011; 193:333-346 Crossref Scopus (285) PubMed Google Scholar
  41. [49]49. Witte, H. ∙ Neukirchen, D. ∙ Bradke, F. Microtubule stabilization specifies initial neuronal polarization J. Cell Biol. 2008; 180:619-632 Crossref Scopus (429) PubMed Google Scholar
  42. [51]51. Wu, H. ∙ Voeltz, G.K. Reticulon-3 promotes endosome maturation at ER membrane contact sites Dev. Cell. 2021; 56:52-66.e7 Full Text Full Text (PDF) Scopus (48) PubMed Google Scholar
  43. [52]52. Wu, M.M. ∙ Buchanan, J. ∙ Luik, R.M. ... Ca2+ store depletion causes STIM1 to accumulate in ER regions closely associated with the plasma membrane J. Cell Biol. 2006; 174:803-813 Crossref Scopus (688) PubMed Google Scholar
  44. [53]53. Wu, Y. ∙ Whiteus, C. ∙ Xu, C.S. ... Contacts between the endoplasmic reticulum and other membranes in neurons Proc. Natl. Acad. Sci. USA. 2017; 114:E4859-E4867 Crossref Scopus (312) PubMed Google Scholar
  45. [54]54. Xu, K. ∙ Zhong, G. ∙ Zhuang, X. Actin, spectrin, and associated proteins form a periodic cytoskeletal structure in axons Science. 2013; 339:452-456 Crossref Scopus (926) PubMed Google Scholar
  46. [55]55. Yalçın, B. ∙ Zhao, L. ∙ Stofanko, M. ... Modeling of axonal endoplasmic reticulum network by spastic paraplegia proteins Elife. 2017; 6:e23882 Crossref Scopus (59) PubMed Google Scholar
  47. [56]56. Zheng, J.Q. ∙ Kelly, T.K. ∙ Chang, B. ... A functional role for intra-axonal protein synthesis during axonal regeneration from adult sensory neurons J. Neurosci. 2001; 21:9291-9303 Crossref PubMed Google Scholar
  48. [57]57. Zurek, N. ∙ Sparks, L. ∙ Voeltz, G. Reticulon short hairpin transmembrane domains are used to shape ER tubules Traffic. 2011; 12:28-41 Crossref Scopus (159) PubMed Google Scholar Article metrics Related Articles Opens in new window Request institutional access Advertisement Emiliano Zamponi Affiliations Department of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, 80309, USA Howard Hughes Medical Institute, Boulder, CO, 80309, USA Search for articles by this author Janet B. Meehl Affiliations Department of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, 80309, USA Howard Hughes Medical Institute, Boulder, CO, 80309, USA Search for articles by this author Gia K. Voeltz Correspondence Corresponding author Send email to gia.voeltz@colorado.edu Footnotes Lead contact Affiliations Department of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, 80309, USA Howard Hughes Medical Institute, Boulder, CO, 80309, USA Search for articles by this author Hide CaptionDownloadSee figure in Article Toggle Thumbstrip Download Hi-res image Download .PPT Advertisement Life & medical sciences journals Cell Cancer Cell Cell Chemical Biology Cell Genomics Cell Host & Microbe Cell Metabolism Cell Reports Cell Reports Medicine Cell Stem Cell Cell Systems Current Biology Developmental Cell Immunity Med Molecular Cell Neuron Structure American Journal of Human Genetics (partner) Biophysical Journal (partner) Biophysical Reports (partner) Human Genetics and Genomics Advances (partner) Molecular Plant (partner) Molecular Therapy (partner) Molecular Therapy Advances (partner) Molecular Therapy Nucleic Acids (partner) Molecular Therapy Oncology (partner) Plant Communications (partner) Stem Cell Reports (partner) Trends in Biochemical Sciences Trends in Cancer Trends in Cell Biology Trends in Ecology & Evolution Trends in Endocrinology & Metabolism Trends in Genetics Trends in Immunology Trends in Microbiology Trends in Molecular Medicine Trends in Neurosciences Trends in Parasitology Trends in Pharmacological Sciences Trends in Plant Science Physical sciences & engineering journals Cell Biomaterials Cell Reports Physical Science Chem Chem Catalysis Chem Circularity Device Joule Matter Matter & Light Newton Trends in Chemistry Multidisciplinary journals Cell Press Blue Cell Reports Methods Cell Reports Sustainability Heliyon iScience One Earth Patterns STAR Protocols Nexus (partner) The Innovation (partner) Trends in Biotechnology Trends in Cognitive Sciences Trends Open Authors Submit article Multi-Journal Submission STAR Methods Sneak Peek – Preprints Reviewers Information for reviewers News & events Newsroom Events Cell Press Symposia Consortia Hub Webinars About About Cell Press Open access COVID Hub Sustainability hub Inclusion Careers Cell Press Careers Access Subscribe Claim Read-It-Now Recommend to Librarian Publication Alerts Collections Best of Cell Press Cell Press Reviews Information For Librarians The content on this site is intended for healthcare professionals and researchers across all fields of science. All content on this site: Copyright © 2026 Elsevier Inc., its licensors, and contributors. All rights are reserved, including those for text and data mining, AI training, and similar technologies. For all open access content, the relevant licensing terms apply. Privacy Policy Terms & Conditions Accessibility Help & Support Contact Responsible AI RELX

Cited by

Sorted by citations

Authors
Zamponi, E., Meehl, J. B., & Voeltz, G. K.
Affiliations
Howard Hughes Medical Institute (US)
Corresponding author
Voeltz, Gia K.
Venue
Developmental Cell
Publisher
Elsevier BV
Published
2022-06
Volume
57
Issue
11
Pages
1369-1382.e6
ISSN
1534-5807 (ISSN-L)
OpenAlex
W4281286433
Cited by
32
References
2
Citations by year
2026: 7 · 2025: 7 · 2024: 8 · 2023: 9 · 2022: 1
FWCI
3.33
Type
journal article
Language
en
Open access
Locations
  • Developmental Cell (publishedVersion, cc-by)
  • PubMed (publishedVersion)
Funders
Howard Hughes Medical Institute
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
  • Life Sciences › Neuroscience › Sensory Systems › Ion Channels and Receptors
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Endoplasmic Reticulum Stress and Disease
Keywords
microtubule interaction, ER dynamics, vesicle trafficking, STIM1, ER-plasma membrane contact sites, calcium signaling, developing neurons, axon development
MeSH terms
Animals, Axons, Calcium, Cytoskeleton, Endoplasmic Reticulum, Mammals, Microtubules, Neurons

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review