The DOI matches its Crossref record.
Determination of complete sequence information of the human ABO blood group orthologous gene in pigs and breed difference in blood type frequencies
Abstract
The sequence information of the genomic form of the human ABO blood group orthologous gene (erythrocyte antigen A, EAA) is not complete in pigs. Therefore, we cloned and characterized the nucleotide sequence of EAA intron 7, which is critical to understand genetic difference between A and 0 blood groups in pigs, covering complete genomic sequence information of EAA excluding a ~560bp unsequencible gap. We also analyzed genetic polymorphisms within EAA intron 7 and exon 8. We found difference in A0 blood group frequencies among pig breeds. In addition, we designed a new genomic DNA-based A0 blood group typing method and improved the accuracy and simplicity of the typing.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“In addition, pigs with OO blood type were selected to eliminate ABO blood-type incompatibilities29.”
From Design and testing of a humanized porcine donor for xenotransplantation (2023) · cites this paper as [29]
Citations
Cites
No references could be resolved yet.
Research works printed but not linked: 32
- Anstee, 2010, The relationship between blood groups and disease, Blood, 115, 4635, 10.1182/blood-2010-01-261859 · DOI
- Barragan, 2000, Blood group A antigen is a coreceptor in Plasmodium falciparum rosetting, Infect. Immun., 68, 2971, 10.1128/IAI.68.5.2971-2975.2000 · DOI
- Cepica, 1996, Chromosomal assignment of porcine EAD, EAO, LPR and P3 genes by linkage analysis, Anim. Genet., 27, 109, 10.1111/j.1365-2052.1996.tb00478.x · DOI
- Cooling, 2015, Blood groups in infection and host susceptibility, Clin. Microbiol. Rev., 28, 801, 10.1128/CMR.00109-14 · DOI
- Edgren, 2010, Risk of gastric cancer and peptic ulcers in relation to ABO blood type: a cohort study, Am. J. Epidemiol., 172, 1280, 10.1093/aje/kwq299 · DOI
- Garratty, 2004, ABO and Rh(D) phenotype frequencies of different racial/ethnic groups in the United States, Transfusion, 44, 703, 10.1111/j.1537-2995.2004.03338.x · DOI
- Groenen, 2012, Analyses of pig genomes provide insight into porcine demography and evolution, Nature, 491, 393, 10.1038/nature11622 · DOI
- Ibrahim, 2001, Amplification and direct sequence analysis of the 23S rRNA gene from thermophilic bacteria, Biotechniques, 30, 414, 10.2144/01302rr05 · DOI
- Iodice, 2010, ABO blood group and cancer, Eur. J. Cancer, 46, 3345, 10.1016/j.ejca.2010.08.009 · DOI
- Khattak, 2008, Frequency of ABO and Rhesus blood groups in District Swat, Pakistan, J. Ayub Med. Coll. Abbottabad, 20, 127
- Kominato, 1992, Animal histo-blood group ABO genes, Biochem. Biophys. Res. Commun., 189, 154, 10.1016/0006-291X(92)91538-2 · DOI
- Liumbruno, 2013, Beyond immunohaematology: the role of the ABO blood group in human diseases, Blood Transfus., 11, 491
- Mariani, 1996, The extension coat color locus and the loci for blood group O and tyrosine aminotransferase are on pig chromosome 6, J. Hered., 87, 272, 10.1093/oxfordjournals.jhered.a023000 · DOI
- Marques, 2011, Frequency of blood type A, B, and AB in 515 domestic shorthair cats from the Lisbon area, Vet. Clin. Pathol., 40, 185, 10.1111/j.1939-165X.2011.00303.x · DOI
- Mehrazin, 2006, ABO blood group frequency and brain tumors, Asian Pac. J. Cancer Prev., 7, 582
- Miller, 1988, A simple salting out procedure for extracting DNA from human nucleated cells, Nucleic Acids Res., 16, 1215, 10.1093/nar/16.3.1215 · DOI
- Nguyen, 2011, Molecular characterization of the human ABO blood group orthologous system in pigs, Anim. Genet., 42, 325, 10.1111/j.1365-2052.2010.02152.x · DOI
- Pant, 1992, Frequency of ABO blood groups, sickle-cell haemoglobin, G-6-PD deficiency and their relation with malaria in scheduled castes and scheduled tribes of Kheda District, Gujarat, Indian J. Malariol., 29, 235
- Qiu, 2011, A relationship between ABO blood groups and clinicopathologic characteristics of patients with gastric adenocarcinoma in China, Med. Oncol., 28, S268, 10.1007/s12032-010-9735-5 · DOI
- Rasmi, 2009, Frequency of ABO blood group in peptic ulcer disease in Iranian subjects, Pak. J. Biol. Sci., 12, 991, 10.3923/pjbs.2009.991.993 · DOI
- Reid, 2011, DNA-based methods in the immunohematology reference laboratory, Transfus. Apher. Sci., 44, 65, 10.1016/j.transci.2010.12.011 · DOI
- Richard, 2008, Comparative genomics and molecular dynamics of DNA repeats in eukaryotes, Microbiol. Mol. Biol. Rev., 72, 686, 10.1128/MMBR.00011-08 · DOI
- Setcavage, 1976, Variability of the immunological state of germfree colostrum-deprived Minnesota miniature piglets, Infect. Immun., 13, 600, 10.1128/iai.13.2.600-607.1976 · DOI
- Wagner, 1995, Frequencies of the blood groups ABO, Rhesus, D category VI, Kell, and of clinically relevant high-frequency antigens in south-western Germany, Infusionsther. Transfusionsmed., 22, 285
- Watkins, 1980, Biochemistry and genetics of the ABO, Lewis, and P blood group systems, Adv. Hum. Genet., 10, 379
- Yamamoto, 1995, Molecular genetics of the ABO histo-blood group system, Vox Sang., 69, 1, 10.1111/j.1423-0410.1995.tb00339.x · DOI
- Yamamoto, 2004, Review: ABO blood group system—ABH oligosaccharide antigens, anti-A and anti-B, A and B glycosyltransferases, and ABO genes, Immunohematology, 20, 3, 10.21307/immunohematology-2019-418 · DOI
- Yamamoto, 2001, Molecular genetic basis of porcine histo-blood group AO system, Blood, 97, 3308, 10.1182/blood.V97.10.3308 · DOI
- Yamamoto, 1990, Molecular genetic basis of the histo-blood group ABO system, Nature, 345, 229, 10.1038/345229a0 · DOI · Paper page
- Yamamoto, 1990, Cloning and characterization of DNA complementary to human UDP-GalNAc: Fuc alpha 1–2Gal alpha 1–3GalNAc transferase (histo-blood group A transferase) mRNA, J. Biol. Chem., 265, 1146, 10.1016/S0021-9258(19)40170-1 · DOI
- Yip, 2006, ABO blood group in Kuwaitis: detailed allele frequency distribution and identification of novel alleles, Transfusion, 46, 773, 10.1111/j.1537-2995.2006.00796.x · DOI
- Zhu, 2010, Distribution of ABO blood group allele and identification of three novel alleles in the Chinese Han population, Vox Sang., 98, 554, 10.1111/j.1423-0410.2009.01291.x · DOI
Cited by
Sorted by citations
Design and testing of a humanized porcine donor for xenotransplantation
Anand, R. P., Layer, J. V., Heja, D., Hirose, T., Lassiter, G., Firl, D. J., Paragas, V. B., Akkad, A., Chhangawala, S., Colvin, R. B., et al. (2023) · Nature · doi:10.1038/s41586-023-06594-4 · Cited by 302
Metadata
- Authors
- Choi, M.-K., Le, M. T., Cho, H., Yum, J., Kang, M., Song, H., Kim, J.-H., Chung, H. J., Hong, K., & Park, C.
- Venue
- Gene
- Publisher
- Elsevier BV
- Published
- 2018-01
- Volume
- 640
- Pages
- 1-5
- ISSN
- 0378-1119
- Cited by
- 14
- References
- 0
- Language
- en
- Funders
- National Research Foundation of Korea
- Ministry of Education (2016R1A6A3A01007617)
- Ministry of Science, ICT and Future Planning (2015R1A5A1009701)
- Rural Development Administration
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review