Cited by 14Microbial Metabolic Engineering and BioproductionBacterial Genetics and BiotechnologyMicrobial metabolism and enzyme function

The DOI matches its Crossref record.

Enhanced production of branched-chain amino acids by Gluconacetobacter europaeus with a specific regional deletion in a leucine responsive regulator

Akasaka, Naoki, Ishii, Yuri, Hidese, Ryota, Sakoda, Hisao, Fujiwara, Shinsuke·2014·Journal of Bioscience and Bioengineering

Abstract

Vinegar with increased amounts of branched-chain amino acids (BCAAs; valine, leucine and isoleucine) is favorable for human health as BCAAs decrease diet-induced obesity and hyperglycemia. To construct Gluconacetobacter europaeus which produces BCAAs, leucine responsive regulator (GeLrp) is focused and two Gelrp mutants were constructed. Wild-type KGMA0119 didn't produce significant amount of valine (0.13 mM) and leucine (0 mM) and strain KGMA7110 which lacks complete Gelrp accumulated valine (0.48 mM) and leucine (0.11 mM) but showed impaired growth, and it was fully restored in the presence of essential amino acids. Strain KGMA7203 was then constructed with a nonsense mutation at codon Trp132 in the Gelrp, which leads a specific deletion at an estimated ligand-sensing region in the C-terminal domain. KGMA7203 produced greater quantities of valine (0.80 mM) and leucine (0.26 mM) and showed the same growth characteristics as KGMA0119. mRNA levels of BCAAs biosynthesis genes (ilvI and ilvC) and probable BCAAs efflux pump (leuE) were determined by quantitative reverse-transcription PCR. Expression rates of ilvI and ilvC in the two Gelrp disruptants were greater than those in KGMA0119. leuE was highly expressed in KGMA7110 only, suggesting that the accumulation in KGMA7110 culture was caused by increased expression of the biosynthesis genes and abnormal enhanced export of amino acids resulting in impaired cell growth. In contrast, KGMA7203 would achieve the high level production through enhanced expression of the biosynthesis genes without enhancing that for the efflux pump. KGMA7203 was considered advantageous for production of vinegar with higher amounts of valine and leucine.

Overview

Integrity signals

Registry

Crossref · 10.1016/j.jbiosc.2014.05.024

Cites

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

This paper’s full text isn’t openly available, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 43

  1. Akasaka, 2013, An efficient method using Gluconacetobacter europaeus to reduce an unfavorable flavor compound, acetoin, in rice vinegar production, Appl. Environ. Microbiol., 79, 7334, 10.1128/AEM.02397-13 · DOI
  2. Andrés-Barrao, 2011, Genome sequences of the high-acetic acid-resistant bacteria Gluconacetobacter europaeus LMG 18890T and G. europaeus LMG 18494 (reference strains), G. europaeus 5P3, and Gluconacetobacter oboediens 174Bp2 (isolated from vinegar), J. Bacteriol., 193, 2670, 10.1128/JB.00229-11 · DOI
  3. Krajewski, 2010, Metabolic engineering of Gluconobacter oxydans for improved growth rate and growth yield on glucose by elimination of gluconate formation, Appl. Environ. Microbiol., 76, 4369, 10.1128/AEM.03022-09 · DOI
  4. Shinjoh, 2002, NADPH-dependent L-sorbose reductase is responsible for L-sorbose assimilation in Gluconobacter suboxydans IFO 3291, J. Bacteriol., 184, 861, 10.1128/JB.184.3.861-863.2002 · DOI
  5. Czaja, 2007, The future prospects of microbial cellulose in biomedical applications, Biomacromolecules, 8, 1, 10.1021/bm060620d · DOI
  6. Nakai, 2013, Formation of highly twisted ribbons in a carboxymethylcellulase gene-disrupted strain of a cellulose-producing bacterium, J. Bacteriol., 195, 958, 10.1128/JB.01473-12 · DOI
  7. Yadav, 2010, Novel in vivo-degradable cellulose-chitin copolymer from metabolically engineered Gluconacetobacter xylinus, Appl. Environ. Microbiol., 76, 6257, 10.1128/AEM.00698-10 · DOI
  8. Lee, 2004, Indole-3-acetic acid biosynthesis is deficient in Gluconacetobacter diazotrophicus strains with mutations in cytochrome c biogenesis genes, J. Bacteriol., 186, 5384, 10.1128/JB.186.16.5384-5391.2004 · DOI
  9. Saravanan, 2007, Solubilization of insoluble zinc compounds by Gluconacetobacter diazotrophicus and the detrimental action of zinc ion (Zn2+) and zinc chelates on root knot nematode Meloidogyne incognita, Lett. Appl. Microbiol., 44, 235, 10.1111/j.1472-765X.2006.02079.x · DOI
  10. Sevilla, 2001, Comparison of benefit to sugarcane plant growth and 15N2 incorporation following inoculation of sterile plants with Acetobacter diazotrophicus wild-type and Nif- mutant strains, Mol. Plant Microbe Interact., 14, 358, 10.1094/MPMI.2001.14.3.358 · DOI
  11. Trček, 2007, The highly tolerant acetic acid bacterium Gluconacetobacter europaeus adapts to the presence of acetic acid by changes in lipid composition, morphological properties and PQQ-dependent ADH expression, Extremophiles, 11, 627, 10.1007/s00792-007-0077-y · DOI
  12. Guo, 2010, Chronic leucine supplementation improves glycemic control in etiologically distinct mouse models of obesity and diabetes mellitus, Nutr. Metab., 7, 57, 10.1186/1743-7075-7-57 · DOI
  13. Macotela, 2011, Dietary leucine - an environmental modifier of insulin resistance acting on multiple levels of metabolism, PLoS ONE, 6, e21187, 10.1371/journal.pone.0021187 · DOI
  14. Zhang, 2007, Increasing dietary leucine intake reduces diet-induced obesity and improves glucose and cholesterol metabolism in mice via multimechanisms, Diabetes, 56, 1647, 10.2337/db07-0123 · DOI
  15. Arakawa, 2011, The effects of branched-chain amino acid granules on the accumulation of tissue triglycerides and uncoupling proteins in diet-induced obese mice, Endocrinol. Jpn., 58, 161
  16. Yang, 2013, leucine facilitates insulin signaling through a Gαi protein-dependent signaling pathway in hepatocytes, J. Biol. Chem., 288, 9313, 10.1074/jbc.M112.409409 · DOI
  17. Kisumi, 1971, Valine accumulation by alpha-aminobutyric acid-resistant mutants of Serratia marcescens, J. Bacteriol., 106, 493, 10.1128/JB.106.2.493-499.1971 · DOI
  18. Mendel, 2001, Acetohydroxyacid synthase: a proposed structure for regulatory subunits supported by evidence from mutagenesis, J. Mol. Biol., 307, 465, 10.1006/jmbi.2000.4413 · DOI
  19. Akasaka, 2012, Branched-chain amino acid production by an acetic acid bacterium Gluconacetobacter europaeus, Seibutsu-Kogaku, 90, 374
  20. Kölling, 1985, AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli, J. Bacteriol., 164, 310, 10.1128/JB.164.1.310-315.1985 · DOI
  21. Yokoyama, 2006, Feast/famine regulatory proteins (FFRPs): Escherichia coli Lrp, AsnC and related archaeal transcription factors, FEMS. Microbiol. Rev., 30, 89, 10.1111/j.1574-6976.2005.00005.x · DOI
  22. Hidese, 2012, Pseudomonas putida PydR, a RutR-like transcriptional regulator, represses the dihydropyrimidine dehydrogenase gene in the pyrimidine reductive catabolic pathway, J. Biochem., 152, 341, 10.1093/jb/mvs079 · DOI
  23. Brinkman, 2003, The Lrp family of transcriptional regulators, Mol. Microbiol., 48, 287, 10.1046/j.1365-2958.2003.03442.x · DOI
  24. Cho, 2008, Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli, Proc. Natl. Acad. Sci. USA, 105, 19462, 10.1073/pnas.0807227105 · DOI
  25. Newman, 1995, Leucine-responsive regulatory protein: a global regulator of gene expression in E. coli, Annu. Rev. Microbiol., 49, 747, 10.1146/annurev.mi.49.100195.003531 · DOI
  26. Thaw, 2006, Structural insight into gene transcriptional regulation and effector binding by the Lrp/AsnC family, Nucleic Acids Res., 34, 1439, 10.1093/nar/gkl009 · DOI
  27. Holmqvist, 2012, A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp, Mol. Microbiol., 84, 414, 10.1111/j.1365-2958.2012.07994.x · DOI
  28. Chen, 2001, Leucine-regulated self-association of leucine-responsive regulatory protein (Lrp) from Escherichia coli, J. Mol. Biol., 312, 625, 10.1006/jmbi.2001.4955 · DOI
  29. Platko, 1990, The ilvIH operon of Escherichia coli is positively regulated, J. Bacteriol., 172, 4563, 10.1128/jb.172.8.4563-4570.1990 · DOI
  30. Platko, 1993, Mutations affecting the ability of Escherichia coli Lrp to bind DNA, activate transcription, or respond to leucine, J. Bacteriol., 175, 1110, 10.1128/jb.175.4.1110-1117.1993 · DOI
  31. Hanahan, 1983, Studies on transformation of Escherichia coli with plasmids, J. Mol. Biol., 166, 557, 10.1016/S0022-2836(83)80284-8 · DOI
  32. Bolívar, 1977, Construction and characterization of new cloning vehicles. II. A multipurpose cloning system, Gene, 2, 95, 10.1016/0378-1119(77)90000-2 · DOI
  33. Gao, 2012, Indole-3-glycerol-phosphate synthase is recognized by a cold-inducible group II chaperonin in Thermococcus kodakarensis, Appl. Environ. Microbiol., 78, 3806, 10.1128/AEM.07996-11 · DOI
  34. Nagaoka, 2013, Importance and determinants of induction of cold-induced DEAD RNA helicase in the hyperthermophilic archaeon Thermococcus kodakarensis, J. Bacteriol., 195, 3442, 10.1128/JB.00332-13 · DOI
  35. Sato, 2003, Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakarensis KOD1, J. Bacteriol., 185, 210, 10.1128/JB.185.1.210-220.2003 · DOI
  36. Badawy, 2012, The EZ: Faast family of amino acid analysis kits: application of the GC-FID kit for rapid determination of plasma tryptophan and other amino acids, Methods Mol. Biol., 828, 153, 10.1007/978-1-61779-445-2_14 · DOI
  37. Kutukova, 2005, The yeaS (leuE) gene of Escherichia coli encodes an exporter of leucine, and the Lrp protein regulates its expression, FEBS Lett., 579, 4629, 10.1016/j.febslet.2005.07.031 · DOI
  38. Zakataeva, 1999, The novel transmembrane Escherichia coli proteins involved in the amino acid efflux, FEBS Lett., 452, 228, 10.1016/S0014-5793(99)00625-0 · DOI
  39. Ettema, 2002, A novel ligand-binding domain involved in regulation of amino acid metabolism in prokaryotes, J. Biol. Chem., 277, 37464, 10.1074/jbc.M206063200 · DOI
  40. Umbarger, 1956, Evidence for a negative-feedback mechanism in the biosynthesis of isoleucine, Science, 123, 848, 10.1126/science.123.3202.848 · DOI
  41. Park, 2007, Metabolic engineering of Escherichia coli for the production of l-valine based on transcriptome analysis and in silico gene knockout simulation, Proc. Natl. Acad. Sci. USA, 104, 7797, 10.1073/pnas.0702609104 · DOI · Paper page
  42. Koon, 2004, Crystal structure of LeuA from Mycobacterium tuberculosis, a key enzyme in leucine biosynthesis, Proc. Natl. Acad. Sci. USA, 101, 8295, 10.1073/pnas.0400820101 · DOI
  43. Ikeda, 2009, Reengineering of a Corynebacterium glutamicum l-arginine and l-citrulline producer, Appl. Environ. Microbiol., 75, 1635, 10.1128/AEM.02027-08 · DOI

Cited by

Sorted by citations

See all 14

Metadata

Authors
Akasaka, N., Ishii, Y., Hidese, R., Sakoda, H., & Fujiwara, S.
Affiliations
Kwansei Gakuin University (JP)
Venue
Journal of Bioscience and Bioengineering
Publisher
Elsevier BV
Published
2014-12
Volume
118
Issue
6
Pages
607-615
ISSN
  • 1347-4421 (ISSN-L)
  • 1389-1723
OpenAlex
W2092572386
Cited by
14
References
0
Citations by year
2026: 1 · 2025: 1 · 2021: 4 · 2020: 1 · 2019: 2 · 2017: 1 · 2016: 2 · 2015: 2
FWCI
0.63
Type
journal article
Language
en
Open access
closed
Locations
  • Journal of Bioscience and Bioengineering (publishedVersion)
  • PubMed (publishedVersion)
Funders
Japan Society for the Promotion of Science (24310015)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial Metabolic Engineering and Bioproduction
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial metabolism and enzyme function
Keywords
branched-chain amino acids, isoleucine, vinegar, gene disruption mutants
MeSH terms
Amino Acids, Branched-Chain, Leucine, RNA, Bacterial, RNA, Messenger, Valine, Gluconacetobacter

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

How to cite

Cite CoChat for the checks on this page, and the paper for its own findings.

This page
CoChat. (2026). Citation check: Enhanced production of branched-chain amino acids by Gluconacetobacter europaeus with a specific regional deletion in a leucine responsive regulator. https://app.cochat.ai/papers/10.1016/j.jbiosc.2014.05.024
The paper
Akasaka, N., Ishii, Y., Hidese, R., Sakoda, H., & Fujiwara, S. (2014). Enhanced production of branched-chain amino acids by Gluconacetobacter europaeus with a specific regional deletion in a leucine responsive regulator. Journal of Bioscience and Bioengineering. https://doi.org/10.1016/j.jbiosc.2014.05.024