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Cited by 40Microbial bioremediation and biosurfactantsOil Spill Detection and MitigationSteroid Chemistry and Biochemistry

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Degradation of Macondo 252 oil by endophytic Pseudomonas putida

Zheng, Mengyuan, Wang, Weiyao, Hayes, Margaret, Nydell, Alexander, Tarr, Matthew A., Van Bael, Sunshine A., Papadopoulos, Kyriakos·2018·Journal of Environmental Chemical Engineering
DOI 10.1016/j.jece.2017.12.071
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Research works printed but not linked: 67

  1. Hemmer, 2011, Comparative toxicity of eight oil dispersants, Louisiana sweet crude oil (LSC), and chemically dispersed LSC to two aquatic test species, Environ. Toxicol. Chem., 30, 2244, 10.1002/etc.619 · DOI
  2. Trellu, 2016, Removal of hydrophobic organic pollutants from soil washing/flushing solutions: a critical review, J. Hazard. Mater., 306, 149, 10.1016/j.jhazmat.2015.12.008 · DOI
  3. Gilfillan, 1995, Use of remote sensing to document changes in marsh vegetation following the Amoco Cadiz oil spill (Brittany, France, 1978), Mar. Pollut. Bull., 30, 780, 10.1016/0025-326X(95)00069-Y · DOI
  4. Culbertson, 2008, Long-term consequences of residual petroleum on salt marsh grass, J. Appl. Ecol., 45, 1284, 10.1111/j.1365-2664.2008.01477.x · DOI
  5. Ebbs, 1997, Toxicity of zinc and copper to Brassica species: implications for phytoremediation, J. Environ. Qual., 26, 776, 10.2134/jeq1997.00472425002600030026x · DOI
  6. Su, 2016, Responses of endophytic and rhizospheric bacterial communities of salt marsh plant (Spartina alterniflora) to polycyclic aromatic hydrocarbons contamination, J. Soils Sediments, 16, 707, 10.1007/s11368-015-1217-0 · DOI
  7. Dashti, 2009, The potential of oil-utilizing bacterial consortia associated with legume root nodules for cleaning oily soils, Chemosphere, 74, 1354, 10.1016/j.chemosphere.2008.11.028 · DOI
  8. Ma, 2011, Plant growth promoting rhizobacteria and endophytes accelerate phytoremediation of metalliferous soils, Biotechnol. Adv., 29, 248, 10.1016/j.biotechadv.2010.12.001 · DOI
  9. Balseiro-Romero, 2016, Enhanced degradation of diesel in the rhizosphere of after inoculation with diesel-Degrading and plant growth-Promoting bacterial strains, J. Environ. Qual., 45, 924, 10.2134/jeq2015.09.0465 · DOI
  10. Germaine, 2009, Bacterial endophyte-mediated naphthalene phytoprotection and phytoremediation, FEMS Microbiol. Lett., 296, 226, 10.1111/j.1574-6968.2009.01637.x · DOI
  11. Germaine, 2009, Bacterial endophyte-mediated naphthalene phytoprotection and phytoremediation, FEMS Microbiol. Lett., 296, 226, 10.1111/j.1574-6968.2009.01637.x · DOI
  12. Weyens, 2010, Endophytic bacteria improve phytoremediation of Ni and TCE co-contamination, Environ. Pollut., 158, 2422, 10.1016/j.envpol.2010.04.004 · DOI
  13. Doty, 2017, Enhanced degradation of TCE on a superfund site using endophyte-Assisted poplar tree phytoremediation, Environ. Sci. Technol., 51, 10050, 10.1021/acs.est.7b01504 · DOI
  14. Deng, 2013, Enhancement of phytoremediation of Cd- and Pb-contaminated soils by self-fusion of protoplasts from endophytic fungus Mucor sp. CBRF59, Chemosphere, 91, 41, 10.1016/j.chemosphere.2012.11.065 · DOI
  15. Tauqeer, 2016, Phytoremediation of heavy metals by Alternanthera bettzickiana: growth and physiological response, Ecotoxicol. Environ. Saf., 126, 138, 10.1016/j.ecoenv.2015.12.031 · DOI
  16. Fatima, 2015, Bacterial rhizosphere and endosphere populations associated with grasses and trees to be used for phytoremediation of crude oil contaminated soil, Bull. Environ. Contam. Toxicol., 94, 314, 10.1007/s00128-015-1489-5 · DOI
  17. Oliveira, 2015, Microbe-Assisted phytoremediation of hydrocarbons in estuarine environments, Microb. Ecol., 69, 1, 10.1007/s00248-014-0455-9 · DOI
  18. Andreolli, 2013, Endophytic Burkholderia fungorum DBT1 can improve phytoremediation efficiency of polycyclic aromatic hydrocarbons, Chemosphere, 92, 688, 10.1016/j.chemosphere.2013.04.033 · DOI
  19. Petrová, 2017, Preliminary study of phytoremediation of brownfield soil contaminated by PAHs, Sci. Total Environ., 599
  20. Kandalepas, 2015, Shifts in symbiotic endophyte communities of a foundational salt marsh grass following oil exposure from the Deepwater Horizon oil spill, PLoS One, 10, e0122378, 10.1371/journal.pone.0122378 · DOI
  21. Obayori, 2009, Differential degradation of crude oil (Bonny Light) by four Pseudomonas strains, J. Environ. Sci., 21, 243, 10.1016/S1001-0742(08)62258-5 · DOI
  22. Raghavan, 1999, Bioremediation of oil-spilled sites through seeding of naturally adapted Pseudomonas putida, Int. Biodeterior. Biodegrad., 44, 29, 10.1016/S0964-8305(99)00048-7 · DOI
  23. Komukai-Nakamura, 1996, Construction of bacterial consortia that degrade Arabian light crude oil, J. Ferment. Bioeng., 82, 570, 10.1016/S0922-338X(97)81254-8 · DOI
  24. Shim, 1999, Biodegradation of benzene, toluene, ethylbenzene, and o-xylene by a coculture of Pseudomonas putida and Pseudomonas fluorescens immobilized in a fibrous-bed bioreactor, J. Biotechnol., 67, 99, 10.1016/S0168-1656(98)00166-7 · DOI
  25. Fernández, 2012, Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid, Appl. Environ. Microbiol., 78, 5104, 10.1128/AEM.00619-12 · DOI
  26. Sajna, 2015, Crude oil biodegradation aided by biosurfactants from Pseudozyma sp: NII 08165 or its culture broth, Bioresour. Technol., 191, 133, 10.1016/j.biortech.2015.04.126 · DOI
  27. Gibson, 1973, Initial reactions in the oxidation of ethylbenzene by Pseudomonas putida, Biochemistry, 12, 1520, 10.1021/bi00732a008 · DOI
  28. Khan, 2014, Degradation, phytoprotection and phytoremediation of phenanthrene by endophyte Pseudomonas putida, PD1, Environ. Sci. Technol., 48, 12221, 10.1021/es503880t · DOI
  29. Baek, 2004, Effects of crude oil, oil components, and bioremediation on plant growth, J. Environ. Sci. Health Part A, 39, 2465, 10.1081/ESE-200026309 · DOI
  30. Wang, 1995, Chemical characterization of crude oil residues from an arctic beach by GC/MS and GC/FID, Environ. Sci. Technol., 29, 2622, 10.1021/es00010a025 · DOI
  31. Fingas, 1997, Studies on the evaporation of crude oil and petroleum products: i. the relationship between evaporation rate and time, J. Hazard. Mater., 56, 227, 10.1016/S0304-3894(97)00050-2 · DOI
  32. Shigenaka, 2015, Physical and chemical characteristics of in-situ burn residue and other environmental oil samples collected during the deepwater horizon spill response, Interspil Conference, 1
  33. Gibson, 1994, Regulatory effects of bifidobacteria on the growth of other colonic bacteria, J. Appl. Microbiol., 77, 412
  34. Tuleva, 2002, Biosurfactant production by a new Pseudomonas putida strain, Z. Naturforsch. C, 57, 356, 10.1515/znc-2002-3-426 · DOI
  35. Benincasa, 2004, Chemical structure, surface properties and biological activities of the biosurfactant produced by Pseudomonas aeruginosa LBI from soapstock, Antonie Van Leeuwenhoek, 85, 1, 10.1023/B:ANTO.0000020148.45523.41 · DOI
  36. Chen, 2013, Rhamnolipids enhance marine oil spill bioremediation in laboratory system, Mar. Pollut. Bull., 71, 269, 10.1016/j.marpolbul.2013.01.037 · DOI
  37. Nitschke, 2005, Rhamnolipid surfactants: an update on the general aspects of these remarkable biomolecules, Biotechnol. Progr., 21, 1593, 10.1021/bp050239p · DOI
  38. Trzesicka-Mlynarz, 1995, Degradation of polycyclic aromatic hydrocarbons (PAHs) by a mixed culture and its component pure cultures, obtained from PAH-contaminated soil, Can. J. Microbiol., 41, 470, 10.1139/m95-063 · DOI
  39. Walker, 1974, Microbial degradation of model petroleum at low temperatures, Microb. Ecol., 1, 63, 10.1007/BF02512380 · DOI
  40. Adebusoye, 2007, Microbial degradation of petroleum hydrocarbons in a polluted tropical stream, World J. Microbiol. Biotechnol., 23, 1149, 10.1007/s11274-007-9345-3 · DOI
  41. Horowitz, 1975, Sequential growth of bacteria on crude oil, Appl. Microbiol., 30, 10, 10.1128/am.30.1.10-19.1975 · DOI
  42. Calvo, 2004, Surfactant activity of a naphthalene degrading Bacillus pumilus strain isolated from oil sludge, J. Biotechnol., 109, 255, 10.1016/j.jbiotec.2004.01.009 · DOI
  43. Bento, 2005, Diversity of biosurfactant producing microorganisms isolated from soils contaminated with diesel oil, Microbiol. Res., 160, 249, 10.1016/j.micres.2004.08.005 · DOI
  44. Banat, 1993, The isolation of a thermophilic biosurfactant producing Bacillus sp, Biotechnol. Lett., 15, 591, 10.1007/BF00138546 · DOI
  45. Bonilla, 2005, Production and characterization of a new bioemulsifier from Pseudomonas putida ML2, J. Appl. Microbiol., 98, 456, 10.1111/j.1365-2672.2004.02480.x · DOI
  46. Cameotra, 2009, Synthesis of rhamnolipid biosurfactant and mode of hexadecane uptake by Pseudomonas species, Microb. Cell Fact., 8, 16, 10.1186/1475-2859-8-16 · DOI
  47. Kato, 2005, Stable coexistence of five bacterial strains as a cellulose-degrading community, Appl. Environ. Microbiol., 71, 7099, 10.1128/AEM.71.11.7099-7106.2005 · DOI
  48. Dubinsky, 2013, Succession of hydrocarbon-Degrading bacteria in the aftermath of the deepwater horizon oil spill in the gulf of Mexico, Environ. Sci. Technol., 47, 10860, 10.1021/es401676y · DOI
  49. Hazen, 2010, Deep-sea oil plume enriches indigenous oil-degrading bacteria, Science, 330, 204, 10.1126/science.1195979 · DOI
  50. Valentine, 2010, Propane respiration jump-starts microbial response to a deep oil spill, Science, 330, 208, 10.1126/science.1196830 · DOI · Paper page
  51. Mahmoudi, 2013, Rapid degradation of Deepwater Horizon spilled oil by indigenous microbial communities in Louisiana saltmarsh sediments, Environ. Sci. Technol., 47, 13303, 10.1021/es4036072 · DOI
  52. Zelicourt, 2013, Rhizosphere microbes as essential partners for plant stress tolerance, Mol. Plant, 6, 242, 10.1093/mp/sst028 · DOI
  53. Singh, 2011, Unraveling the role of fungal symbionts in plant abiotic stress tolerance, Plant Signaling Behav., 6, 175, 10.4161/psb.6.2.14146 · DOI
  54. Rahman, 2002, Towards efficient crude oil degradation by a mixed bacterial consortium, Bioresour. Technol., 85, 257, 10.1016/S0960-8524(02)00119-0 · DOI
  55. Rahman, 2002, Occurrence of crude oil degrading bacteria in gasoline and diesel station soils, J. Basic Microbiol., 42, 284, 10.1002/1521-4028(200208)42:4<284::AID-JOBM284>3.0.CO;2-M · DOI
  56. Sathishkumar, 2008, Biodegradation of crude oil by individual bacterial strains and a mixed bacterial consortium isolated from hydrocarbon contaminated areas, CLEAN-Soil Air Water, 36, 92, 10.1002/clen.200700042 · DOI
  57. Hazen, 2016, Marine oil biodegradation, Environ. Sci. Technol., 50, 2121, 10.1021/acs.est.5b03333 · DOI
  58. Lin, 2012, Impacts and recovery of the Deepwater Horizon oil spill on vegetation structure and function of coastal salt marshes in the northern Gulf of Mexico, Environ. Sci. Technol., 46, 3737, 10.1021/es203552p · DOI
  59. Atlas, 1975, Effects of temperature and crude oil composition on petroleum biodegradation, Appl. Microbiol., 30, 396, 10.1128/am.30.3.396-403.1975 · DOI
  60. Muratova, 2005, Oil-oxidizing potential of associative rhizobacteria of the genus Azospirillum, Microbiology, 74, 210, 10.1007/s11021-005-0053-4 · DOI
  61. Huang, 2005, A multi-process phytoremediation system for decontamination of persistent total petroleum hydrocarbons (TPHs) from soils, Microchem. J., 81, 139, 10.1016/j.microc.2005.01.009 · DOI
  62. Berg, 2006, Control of plant pathogenic fungi with bacterial endophytes, Microb. Root Endophytes, 53, 10.1007/3-540-33526-9_4 · DOI
  63. Huang, 2004, A multi-process phytoremediation system for removal of polycyclic aromatic hydrocarbons from contaminated soils, Environ. Pollut., 130, 465, 10.1016/j.envpol.2003.09.031 · DOI
  64. Villacieros, 2005, Polychlorinated biphenyl rhizoremediation by Pseudomonas fluorescens F113 derivatives, using a Sinorhizobium meliloti nod system to drive bph gene expression, Appl. Environ. Microbiol., 71, 2687, 10.1128/AEM.71.5.2687-2694.2005 · DOI
  65. Yee, 1998, Rhizoremediation of trichloroethylene by a recombinant, root-colonizing Pseudomonas fluorescens strain expressing toluene ortho-monooxygenase constitutively, Appl. Environ. Microbiol., 64, 112, 10.1128/AEM.64.1.112-118.1998 · DOI
  66. Weyens, 2010, Potential of the TCE-degrading endophyte Pseudomonas putida W619-TCE to improve plant growth and reduce TCE phytotoxicity and evapotranspiration in poplar cuttings, Environ. Pollut., 158, 2915, 10.1016/j.envpol.2010.06.004 · DOI
  67. Liu, 2017, Effect of rhamnolipid solubilization on hexadecane bioavailability: enhancement or reduction?, J. Hazard. Mater., 322, 394, 10.1016/j.jhazmat.2016.10.025 · DOI

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Sorted by citations

Metadata

Authors
Zheng, M., Wang, W., Hayes, M., Nydell, A., Tarr, M. A., Van Bael, S. A., & Papadopoulos, K.
Affiliations
  • Tulane University (US)
  • LSU New Orleans (US)
Corresponding author
Papadopoulos, Kyriakos
ORCID
Venue
Journal of Environmental Chemical Engineering
Publisher
Elsevier BV
Published
2018-02
Volume
6
Issue
1
Pages
643-648
ISSN
  • 2213-2929 (ISSN-L)
  • 2213-3437
DOI
10.1016/j.jece.2017.12.071
OpenAlex
W2778455595
Cited by
40
References
0
Citations by year
2026: 6 · 2025: 8 · 2024: 4 · 2023: 3 · 2022: 6 · 2021: 3 · 2020: 3 · 2019: 5 · 2018: 2
FWCI
1.19
Type
journal article
Language
en
Open access
closed
Licence
Locations
Journal of environmental chemical engineering (publishedVersion)
Funders
Gulf of Mexico Research Initiative
Topics
  • Physical Sciences › Environmental Science › Pollution › Microbial bioremediation and biosurfactants
  • Physical Sciences › Environmental Science › Pollution › Oil Spill Detection and Mitigation
  • Physical Sciences › Chemistry › Organic Chemistry › Steroid Chemistry and Biochemistry
Keywords
crude oil degradation, Pseudomonas putida, endophytes, bioremediation, bacterial consortium, weathered crude oil, total petroleum hydrocarbons, n-alkane degradation, biosurfactant production

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