Rationale and design of the Kidney Precision Medicine Project
Open accessAbstract
Chronic kidney disease (CKD) and acute kidney injury (AKI) are common, heterogeneous, and morbid diseases. Mechanistic characterization of CKD and AKI in patients may facilitate a precision-medicine approach to prevention, diagnosis, and treatment. The Kidney Precision Medicine Project aims to ethically and safely obtain kidney biopsies from participants with CKD or AKI, create a reference kidney atlas, and characterize disease subgroups to stratify patients based on molecular features of disease, clinical characteristics, and associated outcomes. An additional aim is to identify critical cells, pathways, and targets for novel therapies and preventive strategies. This project is a multicenter prospective cohort study of adults with CKD or AKI who undergo a protocol kidney biopsy for research purposes. This investigation focuses on kidney diseases that are most prevalent and therefore substantially burden the public health, including CKD attributed to diabetes or hypertension and AKI attributed to ischemic and toxic injuries. Reference kidney tissues (for example, living-donor kidney biopsies) will also be evaluated. Traditional and digital pathology will be combined with transcriptomic, proteomic, and metabolomic analysis of the kidney tissue as well as deep clinical phenotyping for supervised and unsupervised subgroup analysis and systems biology analysis. Participants will be followed prospectively for 10 years to ascertain clinical outcomes. Cell types, locations, and functions will be characterized in health and disease in an open, searchable, online kidney tissue atlas. All data from the Kidney Precision Medicine Project will be made readily available for broad use by scientists, clinicians, and patients.
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In T2D, advanced CKD is a risk factor for hypoglycemia.
“In T2D, advanced CKD is a risk factor for hypoglycemia (29,79) and, when possible, drugs that control glycemia without increasing risk of hypoglycemia are preferred.”
From Diabetes management in chronic kidney disease: a consensus report by the American Diabetes Association (ADA) and Kidney Disease: Improving Global Outcomes (KDIGO) (2022) · cites this paper as [29]
The Introduction discusses CKD in people with diabetes and lists cardiovascular events, infections, and mortality among CKD outcomes, but does not mention hypoglycemia. Searches for hypoglycemia in advanced CKD and for glycemic control found no passage addressing the claimed risk in T2D. The Study design section focuses on relatively early CKD rather than advanced CKD. (LLM, conf=0.72)
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de Boer, I. H., Khunti, K., Sadusky, T., Tuttle, K. R., Neumiller, J. J., Rhee, C. M., Rosas, S. E., Rossing, P., & Bakris, G. (2022) · Diabetes Care · doi:10.2337/dci22-0027 · Cited by 919 · see citing works
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- Authors
- de Boer, I. H., Alpers, C. E., Azeloglu, E. U., Balis, U. G. J., Barasch, J. M., Barisoni, L., Blank, K. N., Bomback, A. S., Brown, K., Dagher, P. C., Dighe, A. L., Eadon, M. T., El-Achkar, T. M., Gaut, J. P., Hacohen, N., He, Y., Hodgin, J. B., Jain, S., Kellum, J. A., Kiryluk, K., Knight, R., Laszik, Z. G., Lienczewski, C., Mariani, L. H., McClelland, R. L., Menez, S., Moledina, D. G., Mooney, S. D., O’Toole, J. F., Palevsky, P. M., Parikh, C. R., Poggio, E. D., Rosas, S. E., Rosengart, M. R., Sarwal, M. M., Schaub, J. A., Sedor, J. R., Sharma, K., Steck, B., Toto, R. D., Troyanskaya, O. G., Tuttle, K. R., Vazquez, M. A., Waikar, S. S., Williams, K., Wilson, F. P., Zhang, K., Iyengar, R., Kretzler, M., Himmelfarb, J., Knight, R., Lecker, S., Stillman, I., Waikar, S., Mcmahon, G., Weins, A., Short, S., Hacohen, N., Hoover, P., Aulisio, M., Cooperman, L., Herlitz, L., O’Toole, J., Poggio, E., Sedor, J., Jolly, S., Appelbaum, P., Balderes, O., Barasch, J., Bomback, A., Canetta, P. A., d’Agati, V. D., Kiryluk, K., Kudose, S., Mehl, K., Radhakrishnan, J., Weng, C., Barisoni, L., Alexandrov, T., Ashkar, T., Barwinska, D., Dagher, P., Dunn, K., Eadon, M., Ferkowicz, M., Kelly, K., Sutton, T., Winfree, S., Menez, S., Parikh, C., Rosenberg, A., Villalobos, P., Malik, R., Fine, D., Atta, M., Monroy Trujillo, J. M., Slack, A., Rosas, S., Williams, M., Azeloglu, E., He, C. (., Iyengar, R., Hansen, J., Parikh, S., Rovin, B., Anderton, C., Pasa-Tolic, L., Velickovic, D., Lukowski, J., Oliver, G. (., Ardayfio, J., Bebiak, J., Brown, K., Campbell, T., Campbell, C., Hayashi, L., Jefferson, N., Koewler, R., Roberts, G., Saul, J., Shpigel, A., Stutzke, E. C., Wright, L., Miegs, L., Pinkeney, R., Sealfon, R., Troyanskaya, O., Tuttle, K., Dobi, D., Goltsev, Y., Lake, B., Zhang, K., Joanes, M., Laszik, Z., Schroeder, A., Sarwal, M., Sigdel, T., Balis, U., Blanc, V., He, O., Hodgin, J., Kretzler, M., Mariani, L., Menon, R., Otto, E., Schaub, J., Steck, B., Lienczewski, C., Eddy, S., Elder, M., Hall, D., Kellum, J., Kruth, M., Murugan, R., Palevsky, P., Randhawa, P., Rosengart, M., Sims-Lucas, S., Stefanick, M., Stull, S., Tublin, M., Alpers, C., de Boer, I., Dighe, A., Himmelfarb, J., Mcclelland, R., Mooney, S., Shankland, S., Williams, K., Blank, K., Carson, J., Dowd, F., Drager, Z., Park, C., Sharma, K., Zhang, G., Bansal, S., Venkatachalam, M., Kermani, A., Lee, S., Lu, C., Miller, T., Moe, O., Park, H., Sambandam, K., Sanchez, F., Torrealba, J., Robert, T., Vazquez, M., Wang, N., Gaut, J., Jain, S., Vijayan, A., Luciano, R., Moledina, D., Ugochukwu, U., Wilson, F. P., & Alfano, S.
- Affiliations
- Columbia University (US)
- University of Washington (US)
- Washington University in St. Louis (US)
- University of Michigan (US)
- University of Pittsburgh (US)
- Yale University (US)
- Cleveland Clinic (US)
- Johns Hopkins University (US)
- Joslin Diabetes Center (US)
- The University of Texas Southwestern Medical Center (US)
- Boston University (US)
- Broad Institute (US)
- Duke University (US)
- Indiana University Indianapolis (US)
- Princeton University (US)
- University of California San Diego (US)
- The University of Texas at San Antonio Health Science Center (US)
- ORCID
- Barasch, Jonathan M.
- Blank, Kristina N.
- Bomback, Andrew S.
- Dighe, Ashveena L.
- Gaut, Joseph P.
- Kellum, John A.
- Mariani, Laura H.
- Moledina, Dennis G.
- O’Toole, John F.
- Palevsky, Paul M.
- Parikh, Chirag R.
- Poggio, Emilio D.
- Rosas, Sylvia E.
- Schaub, Jennifer A.
- Sedor, John R.
- Stillman, Isaac
- Mcmahon, Gearoid
- Weins, Astrid
- Hoover, Paul
- Aulisio, Mark
- Canetta, Pietro A.
- Kudose, Satoru
- Radhakrishnan, Jai
- Alexandrov, Theodore
- Barwinska, Daria
- Dunn, Kenneth
- Ferkowicz, Michael
- Kelly, Katherine
- Sutton, Timothy
- Winfree, Seth
- Parikh, Chirag
- Fine, Derek
- Roberts, Glenda
- Sealfon, Rachel
- Tuttle, Katherine
- Goltsev, Yury
- Lake, Blue
- Sigdel, Tara
- Balis, Ulysses
- Blanc, Victoria
- Mariani, Laura
- Menon, Rajasree
- Otto, Edgar
- Eddy, Sean
- Hall, Daniel
- Randhawa, Parmjeet
- Tublin, Mitchell
- Dowd, Frederick
- Zhang, Guanshi
- Kermani, Asra
- Lu, Christopher
- Miller, Tyler
- Moe, Orson
- Sambandam, Kamalanathan
- Vijayan, Anitha
- Venue
- Kidney International
- Publisher
- Elsevier BV
- Published
- 2021-03
- Volume
- 99
- Issue
- 3
- Pages
- 498-510
- ISSN
- 0085-2538 (ISSN-L)
- PMC
- PMC8330551
- OpenAlex
- W3131249490
- Cited by
- 187
- References
- 1
- Citations by year
- 2026: 32 · 2025: 41 · 2024: 25 · 2023: 31 · 2022: 40 · 2021: 17 · 2020: 1
- FWCI
- 22.09
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Kidney International (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- eScholarship (California Digital Library) (submittedVersion)
- IUScholarWorks (Indiana University) (submittedVersion)
- Funders
- NIDDK
- Topics
- Health Sciences › Medicine › Nephrology › Chronic Kidney Disease and Diabetes
- Health Sciences › Medicine › Nephrology › Acute Kidney Injury Research
- Health Sciences › Medicine › Nephrology › Renal Diseases and Glomerulopathies
- Keywords
- Kidney Precision Medicine Project, chronic kidney disease, acute kidney injury, renal biopsy, disease subgroups, precision medicine, digital pathology, transcriptomics, proteomics, metabolomics, systems biology, ischemic acute kidney injury, clinical outcomes
- MeSH terms
- Adult, Humans, Kidney, Prospective Studies, Multicenter Studies as Topic, Proteomics, Renal Insufficiency, Chronic, Precision Medicine, Acute Kidney Injury
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