Osh Proteins Control Nanoscale Lipid Organization Necessary for PI(4,5)P2 Synthesis
Open accessAbstract
The plasma membrane (PM) is composed of a complex lipid mixture that forms heterogeneous membrane environments. Yet, how small-scale lipid organization controls physiological events at the PM remains largely unknown. Here, we show that ORP-related Osh lipid exchange proteins are critical for the synthesis of phosphatidylinositol (4,5)-bisphosphate [PI(4,5)P 2 ], a key regulator of dynamic events at the PM. In real-time assays, we find that unsaturated phosphatidylserine (PS) and sterols, both Osh protein ligands, synergistically stimulate phosphatidylinositol 4-phosphate 5-kinase (PIP5K) activity. Biophysical FRET analyses suggest an unconventional co-distribution of unsaturated PS and phosphatidylinositol 4-phosphate (PI4P) species in sterol-containing membrane bilayers. Moreover, using in vivo imaging approaches and molecular dynamics simulations, we show that Osh protein-mediated unsaturated PI4P and PS membrane lipid organization is sensed by the PIP5K specificity loop. Thus, ORP family members create a nanoscale membrane lipid environment that drives PIP5K activity and PI(4,5)P 2 synthesis that ultimately controls global PM organization and dynamics.
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PI(4,5)P2 clusters in the cytoplasmic leaflet align with cholesterol- and sphingomyelin-rich regions in the external leaflet by trans-bilayer coupling.
“Basically, current studies strongly suggest that PI(4,5)P2 clusters in the cytoplasmic leaflet align with cholesterol- and sphingomyelin-rich regions in the external leaflet of the plasma membranes by a mechanism referred to as trans-bilayer coupling [111,127–130].”
From Phosphatidylinositol(4,5)bisphosphate: diverse functions at the plasma membrane (2020) · cites this paper as [130]
The Results passages on lipid co-distribution and the PIP5K specificity loop describe PI4P, phosphatidylserine, and cholesterol interactions, not alignment of PI(4,5)P2 clusters with regions in the external leaflet. Searches for trans-bilayer coupling and sphingomyelin found no passage in our copy addressing the claimed alignment. (LLM, conf=0.76)
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- Alfaro G. Johansen J. Dighe S.A. Duamel G. Kozminski K.G. Beh C.T. The sterol-binding protein Kes1/Osh4p is a regulator of polarized exocytosis Traffic 12 2011 1521 1536 21819498
- Antonny B. Bigay J. Mesmin B. The Oxysterol-Binding Protein Cycle: Burning Off PI(4)P to Transport Cholesterol Annu. Rev. Biochem. 87 2018 809 837 29596003
- Audhya A. Foti M. Emr S.D. Distinct roles for the yeast phosphatidylinositol 4-kinases, Stt4p and Pik1p, in secretion, cell growth, and organelle membrane dynamics Mol. Biol. Cell 11 2000 2673 2689 10930462 PMC14948
- Balla T. Phosphoinositides: tiny lipids with giant impact on cell regulation Physiol. Rev. 93 2013 1019 1137 23899561 PMC3962547
- Beh C.T. Rine J. A role for yeast oxysterol-binding protein homologs in endocytosis and in the maintenance of intracellular sterol-lipid distribution J. Cell Sci. 117 2004 2983 2996 15173322
- Bigay J. Antonny B. Curvature, lipid packing, and electrostatics of membrane organelles: defining cellular territories in determining specificity Dev. Cell 23 2012 886 895 23153485
- Bussi G. Donadio D. Parrinello M. Canonical sampling through velocity rescaling J. Chem. Phys. 126 2007 014101 17212484
- Charman M. Colbourne T.R. Pietrangelo A. Kreplak L. Ridgway N.D. Oxysterol-binding protein (OSBP)-related protein 4 (ORP4) is essential for cell proliferation and survival J. Biol. Chem. 289 2014 15705 15717 24742681 PMC4140924
- Chung J. Torta F. Masai K. Lucast L. Czapla H. Tanner L.B. Narayanaswamy P. Wenk M.R. Nakatsu F. De Camilli P. Intracellular transport. PI4P/phosphatidylserine countertransport at ORP5- and ORP8-mediated ER-plasma membrane contacts Science 349 2015 428 432 26206935 PMC4638224
- Clark J. Anderson K.E. Juvin V. Smith T.S. Karpe F. Wakelam M.J. Stephens L.R. Hawkins P.T. Quantification of PtdInsP3 molecular species in cells and tissues by mass spectrometry Nat. Methods 8 2011 267 272 21278744 PMC3460242
- Covino R. Hummer G. Ernst R. Integrated Functions of Membrane Property Sensors and a Hidden Side of the Unfolded Protein Response Mol. Cell 71 2018 458 467 30075144
- Dahl J.S. Dahl C.E. Stimulation of cell proliferation and polyphosphoinositide metabolism in Saccharomyces cerevisiae GL7 by ergosterol Biochem. Biophys. Res. Commun. 133 1985 844 850 3002372
- de Saint-Jean M. Delfosse V. Douguet D. Chicanne G. Payrastre B. Bourguet W. Antonny B. Drin G. Osh4p exchanges sterols for phosphatidylinositol 4-phosphate between lipid bilayers J. Cell Biol. 195 2011 965 978 22162133 PMC3241724
- Di Paolo G. De Camilli P. Phosphoinositides in cell regulation and membrane dynamics Nature 443 2006 651 657 17035995
- Ejsing C.S. Sampaio J.L. Surendranath V. Duchoslav E. Ekroos K. Klemm R.W. Simons K. Shevchenko A. Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry Proc. Natl. Acad. Sci. USA 106 2009 2136 2141 19174513 PMC2650121
- Fairn G.D. Ogata K. Botelho R.J. Stahl P.D. Anderson R.A. De Camilli P. Meyer T. Wodak S. Grinstein S. An electrostatic switch displaces phosphatidylinositol phosphate kinases from the membrane during phagocytosis J. Cell Biol. 187 2009 701 714 19951917 PMC2806594
- Fujimoto T. Parmryd I. Interleaflet Coupling, Pinning, and Leaflet Asymmetry-Major Players in Plasma Membrane Nanodomain Formation Front. Cell Dev. Biol. 4 2017 155 28119914 PMC5222840
- Georgiev A.G. Sullivan D.P. Kersting M.C. Dittman J.S. Beh C.T. Menon A.K. Osh proteins regulate membrane sterol organization but are not required for sterol movement between the ER and PM Traffic 12 2011 1341 1355 21689253 PMC3171641
- Ghai R. Du X. Wang H. Dong J. Ferguson C. Brown A.J. Parton R.G. Wu J.W. Yang H. ORP5 and ORP8 bind phosphatidylinositol-4, 5-biphosphate (PtdIns(4,5)P 2) and regulate its level at the plasma membrane Nat. Commun. 8 2017 757 28970484 PMC5624964
- Harayama T. Riezman H. Understanding the diversity of membrane lipid composition Nat. Rev. Mol. Cell Biol. 19 2018 281 296 29410529
- Herzog R. Schwudke D. Schuhmann K. Sampaio J.L. Bornstein S.R. Schroeder M. Shevchenko A. A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language Genome Biol. 12 2011 R8 21247462 PMC3091306
- Herzog R. Schuhmann K. Schwudke D. Sampaio J.L. Bornstein S.R. Schroeder M. Shevchenko A. LipidXplorer: a software for consensual cross-platform lipidomics PLoS One 7 2012 e29851 22272252 PMC3260173
- Hirama T. Lu S.M. Kay J.G. Maekawa M. Kozlov M.M. Grinstein S. Fairn G.D. Membrane curvature induced by proximity of anionic phospholipids can initiate endocytosis Nat. Commun. 8 2017 1393 29123120 PMC5680216
- Hofbauer H.F. Gecht M. Fischer S.C. Seybert A. Frangakis A.S. Stelzer E.H.K. Covino R. Hummer G. Ernst R. The molecular recognition of phosphatidic acid by an amphipathic helix in Opi1 J. Cell Biol. 217 2018 3109 3126 29941475 PMC6122994
- Horchani H. de Saint-Jean M. Barelli H. Antonny B. Interaction of the Spo20 membrane-sensor motif with phosphatidic acid and other anionic lipids, and influence of the membrane environment PLoS One 9 2014 e113484 25426975 PMC4245137
- Hu J. Yuan Q. Kang X. Qin Y. Li L. Ha Y. Wu D. Resolution of structure of PIP5K1A reveals molecular mechanism for its regulation by dimerization and dishevelled Nat. Commun. 6 2015 8205 26365782 PMC4570271
- Huang J. Rauscher S. Nawrocki G. Ran T. Feig M. de Groot B.L. Grubmüller H. MacKerell A.D. Jr. CHARMM36m: an improved force field for folded and intrinsically disordered proteins Nat. Methods 14 2017 71 73 27819658 PMC5199616
- Im Y.J. Raychaudhuri S. Prinz W.A. Hurley J.H. Structural mechanism for sterol sensing and transport by OSBP-related proteins Nature 437 2005 154 158 16136145 PMC1431608
- Kaiser H.J. Surma M.A. Mayer F. Levental I. Grzybek M. Klemm R.W. Da Cruz S. Meisinger C. Müller V. Simons K. Lingwood D. Molecular convergence of bacterial and eukaryotic surface order J. Biol. Chem. 286 2011 40631 40637 21965671 PMC3220465
- Kannan M. Lahiri S. Liu L.K. Choudhary V. Prinz W.A. Phosphatidylserine synthesis at membrane contact sites promotes its transport out of the ER J. Lipid Res. 58 2017 553 562 28119445 PMC5335585
- Karotki L. Huiskonen J.T. Stefan C.J. Ziółkowska N.E. Roth R. Surma M.A. Krogan N.J. Emr S.D. Heuser J. Grünewald K. Walther T.C. Eisosome proteins assemble into a membrane scaffold J. Cell Biol. 195 2011 889 902 22123866 PMC3257569
- Klose C. Surma M.A. Gerl M.J. Meyenhofer F. Shevchenko A. Simons K. Flexibility of a eukaryotic lipidome--insights from yeast lipidomics PLoS One 7 2012 e35063 22529973 PMC3329542
- Kobuna H. Inoue T. Shibata M. Gengyo-Ando K. Yamamoto A. Mitani S. Arai H. Multivesicular body formation requires OSBP-related proteins and cholesterol PLoS Genet. 6 2010 e1001055 20700434 PMC2916882
- Krause M.R. Regen S.L. The structural role of cholesterol in cell membranes: from condensed bilayers to lipid rafts Acc. Chem. Res. 47 2014 3512 3521 25310179
- Kunz J. Wilson M.P. Kisseleva M. Hurley J.H. Majerus P.W. Anderson R.A. The activation loop of phosphatidylinositol phosphate kinases determines signaling specificity Mol. Cell 5 2000 1 11 10678164
- Lingwood D. Simons K. Lipid rafts as a membrane-organizing principle Science 327 2010 46 50 20044567
- Liu A. Sui D. Wu D. Hu J. The activation loop of PIP5K functions as a membrane sensor essential for lipid substrate processing Sci. Adv. 2 2016 e1600925 28138522 PMC5262455
- Maekawa M. Fairn G.D. Complementary probes reveal that phosphatidylserine is required for the proper transbilayer distribution of cholesterol J. Cell Sci. 128 2015 1422 1433 25663704
- Manford A.G. Stefan C.J. Yuan H.L. Macgurn J.A. Emr S.D. ER-to-plasma membrane tethering proteins regulate cell signaling and ER morphology Dev. Cell 23 2012 1129 1140 23237950
- Manik M.K. Yang H. Tong J. Im Y.J. Structure of Yeast OSBP-Related Protein Osh1 Reveals Key Determinants for Lipid Transport and Protein Targeting at the Nucleus-Vacuole Junction Structure 25 2017 617 629.e613 28319008
- Menon A.K. Sterol gradients in cells Curr. Opin. Cell Biol. 53 2018 37 43 29783105
- Mesmin B. Bigay J. Moser von Filseck J. Lacas-Gervais S. Drin G. Antonny B. A four-step cycle driven by PI(4)P hydrolysis directs sterol/PI(4)P exchange by the ER-Golgi tether OSBP Cell 155 2013 830 843 24209621
- Moser von Filseck J. Čopič A. Delfosse V. Vanni S. Jackson C.L. Bourguet W. Drin G. Intracellular transport. Phosphatidylserine transport by ORP/Osh proteins is driven by phosphatidylinositol 4-phosphate Science 349 2015 432 436 26206936
- Moser von Filseck J. Vanni S. Mesmin B. Antonny B. Drin G. A phosphatidylinositol-4-phosphate powered exchange mechanism to create a lipid gradient between membranes Nat. Commun. 6 2015 6671 25849868
- Ogasawara Y. Kira S. Mukai Y. Noda T. Yamamoto A. Ole1, fatty acid desaturase, is required for Atg9 delivery and isolation membrane expansion during autophagy in Saccharomyces cerevisiae Biol. Open 6 2017 35 40 27881438 PMC5278431
- Omnus D.J. Manford A.G. Bader J.M. Emr S.D. Stefan C.J. Phosphoinositide kinase signaling controls ER-PM cross-talk Mol. Biol. Cell 27 2016 1170 1180 26864629 PMC4814223
- Schneiter R. Brügger B. Sandhoff R. Zellnig G. Leber A. Lampl M. Athenstaedt K. Hrastnik C. Eder S. Daum G. Electrospray ionization tandem mass spectrometry (ESI-MS/MS) analysis of the lipid molecular species composition of yeast subcellular membranes reveals acyl chain-based sorting/remodeling of distinct molecular species en route to the plasma membrane J. Cell Biol. 146 1999 741 754 10459010 PMC2156145
- Shulga Y.V. Anderson R.A. Topham M.K. Epand R.M. Phosphatidylinositol-4-phosphate 5-kinase isoforms exhibit acyl chain selectivity for both substrate and lipid activator J. Biol. Chem. 287 2012 35953 35963 22942276 PMC3476263
- Simons K. Gerl M.J. Revitalizing membrane rafts: new tools and insights Nat. Rev. Mol. Cell Biol. 11 2010 688 699 20861879
- Sohn M. Korzeniowski M. Zewe J.P. Wills R.C. Hammond G.R.V. Humpolickova J. Vrzal L. Chalupska D. Veverka V. Fairn G.D. PI(4,5)P2 controls plasma membrane PI4P and PS levels via ORP5/8 recruitment to ER-PM contact sites J. Cell Biol. 217 2018 1797 1813 29472386 PMC5940310
- Sousa S.B. Jenkins D. Chanudet E. Tasseva G. Ishida M. Anderson G. Docker J. Ryten M. Sa J. Saraiva J.M. Gain-of-function mutations in the phosphatidylserine synthase 1 (PTDSS1) gene cause Lenz-Majewski syndrome Nat. Genet. 46 2014 70 76 24241535
- Stefan C.J. Manford A.G. Baird D. Yamada-Hanff J. Mao Y. Emr S.D. Osh proteins regulate phosphoinositide metabolism at ER-plasma membrane contact sites Cell 144 2011 389 401 21295699
- Surma M.A. Herzog R. Vasilj A. Klose C. Christinat N. Morin-Rivron D. Simons K. Masoodi M. Sampaio J.L. An automated shotgun lipidomics platform for high throughput, comprehensive, and quantitative analysis of blood plasma intact lipids Eur. J. Lipid Sci. Technol. 117 2015 1540 1549 26494980 PMC4606567
- van Meer G. Voelker D.R. Feigenson G.W. Membrane lipids: where they are and how they behave Nat. Rev. Mol. Cell Biol. 9 2008 112 124 18216768 PMC2642958
- Wen Y. Vogt V.M. Feigenson G.W. Multivalent Cation-Bridged PI(4,5)P2 Clusters Form at Very Low Concentrations Biophys. J. 114 2018 2630 2639 29874613 PMC6129474
- Yeung T. Gilbert G.E. Shi J. Silvius J. Kapus A. Grinstein S. Membrane phosphatidylserine regulates surface charge and protein localization Science 319 2008 210 213 18187657
- Yoshida A. Shigekuni M. Tanabe K. Fujita A. Nanoscale analysis reveals agonist-sensitive and heterogeneous pools of phosphatidylinositol 4-phosphate in the plasma membrane Biochim. Biophys. Acta 1858 2016 1298 1305 26972044
- Zinser E. Sperka-Gottlieb C.D. Fasch E.V. Kohlwein S.D. Paltauf F. Daum G. Phospholipid synthesis and lipid composition of subcellular membranes in the unicellular eukaryote Saccharomyces cerevisiae J. Bacteriol. 173 1991 2026 2034 2002005 PMC207737
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Phosphatidylinositol(4,5)bisphosphate: diverse functions at the plasma membrane
Katan, M., & Cockcroft, S. (2020) · Essays in Biochemistry · doi:10.1042/ebc20200041 · Cited by 176 · see citing works
- Authors
- Nishimura, T., Gecht, M., Covino, R., Hummer, G., Surma, M. A., Klose, C., Arai, H., Kono, N., & Stefan, C. J.
- Affiliations
- MRC Laboratory for Molecular Cell Biology (GB)
- Max Planck Institute of Biophysics (DE)
- Goethe University Frankfurt (DE)
- Lipotype (Germany) (DE)
- Japan Agency for Medical Research and Development (JP)
- Corresponding author
- Nishimura, Taki
- Stefan, Christopher J.
- ORCID
- Venue
- Molecular Cell
- Publisher
- Elsevier BV
- Published
- 2019-09
- Volume
- 75
- Issue
- 5
- Pages
- 1043-1057.e8
- ISSN
- 1097-2765 (ISSN-L)
- PMC
- PMC6739424
- OpenAlex
- W2913811044
- Cited by
- 56
- References
- 0
- Citations by year
- 2026: 3 · 2025: 3 · 2024: 6 · 2023: 6 · 2022: 9 · 2021: 10 · 2020: 16 · 2019: 3
- FWCI
- 3.14
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Locations
- Molecular Cell (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Institutional Repositories DataBase (IRDB) (submittedVersion)
- Publication Server of Goethe University Frankfurt am Main (Goethe University Frankfurt) (submittedVersion, cc-by)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Funders
- MRC (MC_UU_00012/6)
- JSPS Postdoctoral Fellowships for Research Abroad
- Osamu Hayaishi Scholarship for Study Abroad
- Max Planck Society
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biochemistry › Lipid metabolism and biosynthesis
- Keywords
- phosphatidylinositol 4-phosphate 5-kinase, phosphatidylinositol 4-phosphate, phosphatidylserine, sterols, membrane lipid organization, plasma membrane
- MeSH terms
- Carrier Proteins, Saccharomyces cerevisiae, Phosphotransferases (Alcohol Group Acceptor), Phosphatidylinositol 4,5-Diphosphate, Saccharomyces cerevisiae Proteins
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