Cited by 42Telomeres, Telomerase, and SenescenceCancer-related Molecular PathwaysGenetics, Aging, and Longevity in Model Organisms

The DOI matches its Crossref record; the references it cites are not checked yet.

Misidentified Human Gene Functions with Mouse Models: The Case of the Retinoblastoma Gene Family in Senescence

Open access

Abstract

Although mice models rank among the most widely used tools for understanding human genetics, biology, and diseases, differences between orthologous genes among species as close as mammals are possible, particularly in orthologous gene pairs in which one or more paralogous (i.e., duplicated) genes appear in the genomes of the species. Duplicated genes can possess overlapping functions and compensate for each other. The retinoblastoma gene family demonstrates typical composite functionality in its three member genes (i.e., RB1, RB2/P130, and P107), all of which participate in controlling the cell cycle and associated phenomena, including proliferation, quiescence, apoptosis, senescence, and cell differentiation. We analyzed the role of the retinoblastoma gene family in regulating senescence in mice and humans. Silencing experiments with each member of the gene family in mesenchymal stromal cells (MSCs) and fibroblasts from mouse and human tissues demonstrated that RB1 may be indispensable for senescence in mouse cells, but not in human ones, as an example of species specificity. Furthermore, although RB2/P130 seems to be implicated in maintaining human cell senescence, the function of RB1 within any given species might differ by cell type, as an example of cell specificity. For instance, silencing RB1 in mouse fibroblasts induced a reduced senescence not observed in mouse MSCs. Our findings could be useful as a general paradigm of cautions to take when inferring the role of human genes analyzed in animal studies and when examining the role of the retinoblastoma gene family in detail.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.neo.2017.06.005

Cites

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

  • Silencing of the RB gene induced senescence of human mesenchymal stromal cells (MSCs), but not of human fibroblasts, mouse MSCs, and mouse fibroblasts.

    “Alessio et al. reported that silencing of RB gene induced senescence of human mesenchymal stromal cells (MSCs), but not of human fibroblasts, mouse MSCs, and mouse fibroblasts.”
  • RB might play different roles in senescence induction depending on cell types and species.

    “The results indicate that RB might play different roles in senescence induction depending on cell types and species [46].”

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

The citation lists haven’t been fetched yet

References 28 · Cited by 42

Research works printed but not linked: 24

  1. Gharib, 2011, When orthologs diverge between human and mouse, Brief Bioinform, 12, 436, 10.1093/bib/bbr031 · DOI
  2. Campisi, 2007, Cellular senescence: when bad things happen to good cells, Nat Rev Mol Cell Biol, 8, 729, 10.1038/nrm2233 · DOI · Paper page
  3. Classon, 2001, p107 and p130: versatile proteins with interesting pockets, Exp Cell Res, 264, 135, 10.1006/excr.2000.5135 · DOI
  4. Galderisi, 2006, The retinoblastoma gene is involved in multiple aspects of stem cell biology, Oncogene, 25, 5250, 10.1038/sj.onc.1209736 · DOI
  5. LeCouter, 1998, Strain-dependent myeloid hyperplasia, growth deficiency, and accelerated cell cycle in mice lacking the Rb-related p107 gene, Mol Cell Biol, 18, 7455, 10.1128/MCB.18.12.7455 · DOI
  6. LeCouter, 1998, Strain-dependent embryonic lethality in mice lacking the retinoblastoma-related p130 gene, Development, 125, 4669, 10.1242/dev.125.23.4669 · DOI
  7. Claudio, 1994, p130/pRb2 has growth suppressive properties similar to yet distinctive from those of retinoblastoma family members pRb and p107, Cancer Res, 54, 5556
  8. Galderisi, 2003, Cell cycle regulation and neural differentiation, Oncogene, 22, 5208, 10.1038/sj.onc.1206558 · DOI
  9. Haigis, 2006, The related retinoblastoma (pRb) and p130 proteins cooperate to regulate homeostasis in the intestinal epithelium, J Biol Chem, 281, 638, 10.1074/jbc.M509053200 · DOI
  10. Herrera, 1996, Altered cell cycle kinetics, gene expression, and G1 restriction point regulation in Rb-deficient fibroblasts, Mol Cell Biol, 16, 2402, 10.1128/MCB.16.5.2402 · DOI
  11. MacPherson, 2003, Conditional mutation of Rb causes cell cycle defects without apoptosis in the central nervous system, Mol Cell Biol, 23, 1044, 10.1128/MCB.23.3.1044-1053.2003 · DOI
  12. MacPherson, 2004, Cell type–specific effects of Rb deletion in the murine retina, Genes Dev, 18, 1681, 10.1101/gad.1203304 · DOI · Paper page
  13. Galderisi, 2014, The gap between the physiological and therapeutic roles of mesenchymal stem cells, Med Res Rev, 34, 1100, 10.1002/med.21322 · DOI
  14. Capasso, 2015, Changes in autophagy, proteasome activity and metabolism to determine a specific signature for acute and chronic senescent mesenchymal stromal cells, Oncotarget, 6, 39457, 10.18632/oncotarget.6277 · DOI
  15. Debacq-Chainiaux, 2009, Protocols to detect senescence-associated beta-galactosidase (SA-betagal) activity, a biomarker of senescent cells in culture and in vivo, Nat Protoc, 4, 1798, 10.1038/nprot.2009.191 · DOI · Paper page
  16. Aird, 2013, Detection of senescence-associated heterochromatin foci (SAHF), Methods Mol Biol, 965, 185, 10.1007/978-1-62703-239-1_12 · DOI
  17. Helmbold, 2012, The switch from pRb/p105 to Rb2/p130 in DNA damage and cellular senescence, J Cell Physiol, 227, 508, 10.1002/jcp.22786 · DOI
  18. Helmbold, 2009, Rb2/p130 is the dominating pocket protein in the p53-p21 DNA damage response pathway leading to senescence, Oncogene, 28, 3456, 10.1038/onc.2009.222 · DOI
  19. Jackson, 2006, Primary and compensatory roles for RB family members at cell cycle gene promoters that are deacetylated and downregulated in doxorubicin-induced senescence of breast cancer cells, Mol Cell Biol, 26, 2501, 10.1128/MCB.26.7.2501-2510.2006 · DOI · Paper page
  20. Bringold, 2000, Tumor suppressors and oncogenes in cellular senescence, Exp Gerontol, 35, 317, 10.1016/S0531-5565(00)00083-8 · DOI · Paper page
  21. Revandkar, 2016, Inhibition of Notch pathway arrests PTEN-deficient advanced prostate cancer by triggering p27-driven cellular senescence, Nat Commun, 7, 13719, 10.1038/ncomms13719 · DOI
  22. MacLellan, 2005, Overlapping roles of pocket proteins in the myocardium are unmasked by germ line deletion of p130 plus heart-specific deletion of Rb, Mol Cell Biol, 25, 2486, 10.1128/MCB.25.6.2486-2497.2005 · DOI
  23. Macleod, 1996, Loss of Rb activates both p53-dependent and independent cell death pathways in the developing mouse nervous system, EMBO J, 15, 6178, 10.1002/j.1460-2075.1996.tb01006.x · DOI · Paper page
  24. Liu, 2005, Regulation of neuron survival and death by p130 and associated chromatin modifiers, Genes Dev, 19, 719, 10.1101/gad.1296405 · DOI

Metadata

Authors
Alessio, N., Capasso, S., Ferone, A., Di Bernardo, G., Cipollaro, M., Casale, F., Peluso, G., Giordano, A., & Galderisi, U.
Affiliations
  • University of Campania "Luigi Vanvitelli" (IT)
  • National Research Council (IT)
  • University of Siena (IT)
Corresponding author
Galderisi, Umberto
Venue
Neoplasia
Publisher
Elsevier BV
Published
2017-10
Volume
19
Issue
10
Pages
781-790
ISSN
1476-5586 (ISSN-L)
OpenAlex
W2753746371
Cited by
42
References
28
Citations by year
2026: 1 · 2025: 1 · 2024: 10 · 2023: 4 · 2022: 4 · 2021: 5 · 2020: 7 · 2019: 5 · 2018: 5
FWCI
3.44
Type
journal article
Language
en
Open access
Locations
  • Neoplasia (publishedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • Archivio Istituzionale della Ricerca - Università degli Studi della Campania "Luigi Vanvitelli" (submittedVersion)
  • TUScholarShare (Temple University) (submittedVersion, cc-by-nc-nd)
  • Use Siena air (University of Siena) (submittedVersion)
Funders
  • Università degli Studi di Napoli Federico II
  • Seconda Università degli Studi di Napoli
  • Associazione Italiana per la Ricerca sul Cancro (IG 2014-15690, IG-2014)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Telomeres, Telomerase, and Senescence
  • Health Sciences › Medicine › Oncology › Cancer-related Molecular Pathways
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
Keywords
RB1, Rb2/p130, p107, cellular senescence, species specificity, orthologs, gene duplication, paralogs, mesenchymal stem cells, fibroblasts, gene silencing, human-mouse comparison, cell type specificity
MeSH terms
Animals, Cells, Cultured, Disease Models, Animal, Fibroblasts, Multigene Family, Humans, RNA Processing, Post-Transcriptional, Transcription, Genetic, Signal Transduction, Gene Expression Regulation, Neoplastic, Retinoblastoma Protein, Cellular Senescence, Mice, Knockout, Gene Silencing, RNA, Small Interfering, Mice, Genetic Association Studies, Mesenchymal Stem Cells

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review