Computational Neuroethology: A Call to Action
Datta, Sandeep Robert, Anderson, David J., Branson, Kristin, Perona, Pietro, Leifer, Andrew·2019·Neuron
Cited by (432)
Items 201–300 of 432
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- Method for Preprocessing Video Data for Training Deep-Learning Models for Identifying Behavioral Events in Bio-ObjectsMarina Aleksandrovna Barulina, Alexander Andreev, Ilya I. Kovalenko, Ilya Barmin, Eduard Titov, Danil Kirillov · 2024 · Mathematics
- Differential kinematic coding in sensorimotor striatum across behavioral domains reflects different contributions to movementKiah Hardcastle, Jesse D. Marshall, Amanda Gellis, Ugne Klibaite, Cheshta Bhatia, William L. Wang, Selimzhan Chalyshkan, Bence P. Ölveczky · 2025 · Nature Neuroscience
- Simultaneous Monitoring of Wireless Electrophysiology and Memory Behavioral Test as a Tool to Study Hippocampal NeurogenesisMario Humberto Buenrostro-Jáuregui, Luis Miguel Rodríguez–Serrano, María Elena Chávez–Hernández, Alejandro Tapia-de-Jesús, Jesús Jasso Mata, Florencia Mata, Oscar Galicia-Castillo, Daniel Tirado-Martínez, Sylvia Ortega‐Martínez, Erik Bojorges-Valdez · 2020 · Journal of Visualized Experiments
- Stereotyped behavioral maturation and rhythmic quiescence in C. elegans embryosEvan L. Ardiel, Andrew Lauziere, Stephen Xu, Brandon J. Harvey, Ryan Patrick Christensen, Stephen Nurrish, Joshua M. Kaplan, Hari Shroff · 2022 · eLife
- Early-life sleep disruption impairs subtle social behaviours in prairie voles: a pose-estimation studyLézio Soares Bueno-Júnior, Carolyn E. Jones, Noah Milman, Peyton T. Wickham, Brendon O. Watson, Miranda M. Lim · 2023 · Royal Society Open Science
- An Infrared Touch System for Automatic Behavior MonitoringQingqing Liu, Xing Sheng Yang, Ru Song, Junying Su, Moxuan Luo, Jinling Zhong, Liping Wang · 2021 · Neuroscience Bulletin
- JAX Animal Behavior System (JABS): A genetics informed, end-to-end advanced behavioral phenotyping platform for the laboratory mouseAnshul Choudhary, Brian Q. Geuther, Thomas J. Sproule, Glen Beane, Vivek Kohar, Jarek Trapszo, Vivek Kumar · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- DISSeCT: An unsupervised framework for high-resolution mapping of rodent behavior using inertial sensorsRomain Fayat, Marie Sarraudy, Clément Léna, Daniela Popa, Pierre Latouche, Guillaume P. Dugué · 2025 · PLoS Biology
- An Active Sensing Paradigm for Studying Human Auditory PerceptionDardo N. Ferreiro, Valentin R. Winhart, Benedikt Grothe, Bahador Bahrami, Michael Pecka · 2022 · Frontiers in Integrative Neuroscience
- Integrating computer vision and molecular neurobiology to bridge the gap between behavior and the brainIan M. Traniello, Sarah D. Kocher · 2024 · Current Opinion in Insect Science
- Deep learning algorithms reveal increased social activity in rats at the onset of the dark phase of the light/dark cyclePiotr Popik, Ewelina Cyrano, Joanna Gołębiowska, Natalia Malikowska‐Racia, Agnieszka Potasiewicz, Agnieszka Nikiforuk · 2024 · PLoS ONE
- Home-Cage Training for Non-Human Primates: An Opportunity to Reduce Stress and Study Natural Behavior in Neurophysiology ExperimentsFrancesco Ceccarelli, Fabrizio Londei, Giulia Arena, Aldo Genovesio, Lorenzo Ferrucci · 2025 · Animals
- Developmental arcs of plasticity in whole movement repertoires of a clonal fishSean M. Ehlman, Ulrike Scherer, David Bierbach, Luka Stärk, Marvin Beese, Max Wolf · 2025 · iScience
- PainspottingDonald Iain MacDonald, Alexander Theodore Chesler · 2023 · Neuron
- Systematic analysis of goal‐related movement sequences during maternal behaviour in a female mouse model for Rett syndromeParker K. Stevenson, Devin M. Casenhiser, Billy Y. B. Lau, Keerthi Krishnan · 2021 · European Journal of Neuroscience
- Deep Behavioral Phenotyping of Mouse Autism Models using Open-Field BehaviorUgne Klibaite, Mikhail Kislin, Jessica L. Verpeut, Xiaoting Sun, Joshua W. Shaevitz, Samuel S.‐H. Wang · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
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- A contextual fear conditioning paradigm in head-fixed mice exploring virtual realitySeetha Krishnan, Can Dong, Heather Ratigan, Denisse Morales-Rodriguez, Chery Cherian, Mark E. J. Sheffield · 2025 · eLife
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- Comparing human annotation and machine learning models for optimizing zebrafish behavioral classification in seizure analysisBarbara Dotto Fontana, Camilla W Pretzel, Mariana L Müller, Kimberly Fontoura do Nascimento, Khadija A. Mohammed, Eduarda T Saccol, Falco L.S. Gonçalves, Angela E Uchoa, Carolina C. Jardim, Iacoan Wallison Diniz da Silva et al. · 2025 · Journal of Neuroscience Methods
- Social context restructures behavioral syntax in miceMarti Ritter, Hope Shipley, Serena Deiana, Bastian Hengerer, Carsten Tobias Wotjak, Michael Brecht, Amarender R. Bogadhi · 2025 · Frontiers in Behavioral Neuroscience
- Opportunities and mechanisms for learning through social interactions: lessons from marmosetsNikhil Phaniraj, Rahel Katharina Brügger, Paola Cerrito, Judith Maria Burkart · 2026 · Philosophical Transactions of the Royal Society B Biological Sciences
- Navigation strategies in Caenorhabditis elegans are differentially altered by learningKevin S. Chen, Anuj Kumar Sharma, Jonathan W. Pillow, Andrew M. Leifer · 2025 · PLoS Biology
- An integrative assay for measuring social aversion and motivation in freely behaving miceJordan Grammer, Rene Valles, Alexis Bowles, Moriel Zelikowsky · 2025 · Cell Reports Methods
- Foot placement control underlies stable locomotion across speciesAntoine De Comite, Nidhi Seethapathi · 2025 · Proceedings of the National Academy of Sciences
- Advancements in Genomic and Behavioral Neuroscience Analysis for the Study of Normal and Pathological Brain FunctionAnnalisa M. Baratta, Adam J. Brandner, Sonja L. Plasil, Rachel C. Rice, Sean P. Farris · 2022 · Frontiers in Molecular Neuroscience
- Classifying interpersonal synchronization states using a data-driven approach: implications for social interaction understandingRoi Yozevitch, Anat Dahan, Talia Seada, Daniel Appel, Hila Zahava Gvirts · 2023 · Scientific Reports
- What do we mean by the dimensionality of behavior?William Bialek · 2020 · arXiv (Cornell University)
- Machine-learning approaches to classify and understand emotion states in miceNate Dolensek, Nadine Gogolla · 2020 · Neuropsychopharmacology
- ArMo: An Articulated Mesh Approach for Mouse 3D ReconstructionJames P. Bohnslav, Mohammed Abdal Monium Osman, Akshay Jaggi, Sofia Soares, Caleb Weinreb, Sandeep Robert Datta, Christopher D. Harvey · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- JAX Animal Behavior System (JABS), a genetics-informed, end-to-end advanced behavioral phenotyping platform for the laboratory mouseAnshul Choudhary, Brian Q. Geuther, Thomas J. Sproule, Glen Beane, Vivek Kohar, Jarek Trapszo, Vivek Kumar · 2025 · eLife
- FERAL: a supervised video-understanding system for direct video-to-behavior mappingPeter Skovorodnikov, Jacopo Razzauti, Blair R. Costelloe, Friederike Buck, Vikram Chandra, Dominic D. Frank, Tomas Kay, Benjamin Koger, Orli Snir, Janet Zhao et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Measuring the replicability of our own researchRichard E. Brown · 2024 · Journal of Neuroscience Methods
- A study of animal action segmentation algorithms across supervised, unsupervised, and semi-supervised learning paradigmsAri Blau, Evan Schaffer, Neeli Mishra, Nathaniel J Miska, Liam Paninski, Matthew R Whiteway · 2024 · Neurons Behavior Data analysis and Theory
- An Automated AI Framework for Quantitative Measurement of Mammalian BehaviorJia Liu, Tao Liu, Zhiming Hu, Fan Wu, Wenjie Guo, Haojie Wu, Zhan Wang, Yiyi Men, Shuang Yin, Paul A. Garber et al. · 2025 · Integrative Zoology
- Arc regulates a second-guessing cognitive bias during naturalistic foraging through effects on discrete behavior modulesAlicia Ravens, Cornelia Stacher Hörndli, Jared Emery, Susan Steinwand, Jason D. Shepherd, Christopher J. Gregg · 2023 · iScience
- Cross-Species Framework for Emotional Well-Being and Brain AgingF. Vankee Lin, Janine M. Simmons, Adam G. Turnbull, Yi Zuo, Yeates Conwell, Kuan Hong Wang · 2025 · JAMA Psychiatry
- Two modes in the absolute velocity statistics in cautious walks of laboratory rodentsI. S. Midzyanovskaya, Anastasia Rebik, O. S. Idzhilova, F S Smyk, V. V. Strelkov, Natalia L. Komarova, O. A. Chichigina · 2025 · Biophysical Journal
- Online computational ethology based on modern IT infrastructureLeon Bonde Larsen, Mathias Mikkel Neerup, John C. T. Hallam · 2021 · Ecological Informatics
- Automated behavioral scoring: Do we even need humans?William M. Kenkel · 2023 · Annals of the New York Academy of Sciences
- Semi-supervised sequence modeling for improved behavioral segmentationMatthew R Whiteway, Evan Schaffer, Anqi Wu, E. Kelly Buchanan, Omer Fahri Onder, Neeli Mishra, Liam Paninski · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Evaluation of deep lift pose models for 3D rodent pose estimation based on geometrically triangulated dataSarkar, Indrani, Indranil Maji, Charitha Omprakash, Sebastian Stober, Sanja Mikulovic, Pavol Bauer · 2021 · arXiv (Cornell University)
- Quantifying Sex Differences in Behavior in the Era of “Big” DataBrian C. Trainor, Annegret L. Falkner · 2021 · Cold Spring Harbor Perspectives in Biology
- Concerted modulation of spontaneous behavior and time-integrated whole-brain neuronal activity by serotonin receptorsDrew Friedmann, Xavier Gonzalez, Ashley M. Moses, Tanner Watts, Anthony Degleris, Nicole Ticea, Jun Ho Song, Sandeep Robert Datta, Scott W. Linderman, Liqun Luo · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- Larvaworld : A behavioral simulation and analysis platform for Drosophila larvaPanagiotis Sakagiannis, Hannes Rapp, Tihana Jovanic, Martin Paul Nawrot · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Revealing the Body Language of Social Interaction in Free-Moving Mice Using BL-BERTYaning Han, Zhiwei Jiang, Furong Ju, Liping Wang, Quanying Liu, Pengfei Wei · 2025 · Tsinghua Science & Technology
- End-to-end motion detection via multi-scale spatial-temporal feature fusion for dual-view 3D macaque behavior quantificationZhiyuan Chen, Zongli Jiang, Qiang Guan, Xibo Ma · 2025 · Expert Systems with Applications
- From eye to AI: Studying rodent social behavior in the era of machine learningGiuseppe Chindemi, Camilla Bellone, Benoît J. T. Girard · 2026 · Neuroscience & Biobehavioral Reviews
- Dynamic modulation of social gaze by sex and familiarity in marmoset dyadsFeng Xing, Alec G. Sheffield, Monika P. Jadi, Steve W. C. Chang, Anirvan S. Nandy · 2026 · eLife
- A behavioral analysis system MCFBM enables objective inference of songbirds’ attention during social interactionsMizuki Fujibayashi, Kentaro Abe · 2024 · Cell Reports Methods
- SARTAB, a scalable system for automated real-time behavior detection based on animal tracking and Region Of Interest analysis: validation on fish courtship behaviorTucker J. Lancaster, Kathryn N. Leatherbury, Kseniia Shilova, Jeffrey Todd Streelman, Patrick T. McGrath · 2024 · Frontiers in Behavioral Neuroscience
- Temporal action localisation in video data containing rabbit behavioural patternsSemyon E. Ilin, Julia Borodacheva, Ildar D. Shamsiev, Igor V. Bondar, Yulia Alexandrovna Shichkina · 2025 · Scientific Reports
- Measuring the dimensionality of behaviorSurya Ganguli · 2022 · Proceedings of the National Academy of Sciences
- Synchronization of bowhead whalesEvgeny Andreevich Podolskiy, Jonas Teilmann, Mads Peter Heide‐Jørgensen · 2024 · Physical Review Research
- Elucidating the Hierarchical Nature of Behavior with Masked AutoencodersLucas Stoffl, Andy Bonnetto, Stéphane d’Ascoli, Alexander Mathis · 2024 · Lecture notes in computer science
- Statistical signature of subtle behavioral changes in large-scale assaysAlexandre Blanc, François Laurent, Alex Barbier–Chebbah, Hugues Van Assel, Ben Cocanougher, Benjamin M.W. Jones, Peter Hague, Marta Zlatic, Rayan Chikhi, Christian L. Vestergaard et al. · 2025 · PLoS Computational Biology
- Automated Tracking of Primate BehaviorBenjamin Y. Hayden, Hyun Soo Park, Jan Zimmermann · 2021 · arXiv (Cornell University)
- Unsupervised discovery of family specific vocal usage in the Mongolian gerbilRalph E. Peterson, Aman Choudhri, Catalin Mitelut, Aramis Tanelus, Athena Capo-Battaglia, Alex H. Williams, David M. Schneider, Dan H. Sanes · 2023 · eLife
- Insights in neuronal tuning: Navigating the statistical challenges of autocorrelation and missing variablesFredrik Nevjen, Benjamin Adric Dunn · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Precision cutaneous stimulation in freely moving miceIsobel Parkes, Ara Schorscher-Petcu, Qinyi Gan, Liam E. Browne · 2025 · eLife
- Larval zebrafish swim bouts in three dimensions reveal both new and redundant behavioursAniket Ravan, Yann R. Chemla, Martin Gruebele · 2025 · Journal of The Royal Society Interface
- Assessing the determinants of larval fish strike rates using computer visionShir Bar, Liraz Levy, Shai Avidan, Roi Holzman · 2023 · Ecological Informatics
- KineWheel–DeepLabCut Automated Paw Annotation Using Alternating Stroboscopic UV and White Light IlluminationB. Albrecht, Alexej Schatz, Katja Frei, York Winter · 2024 · eNeuro
- Machine learning and confirmatory factor analysis show that buprenorphine alters motor and anxiety-like behaviors in male, female, and obese C57BL/6J miceOhm Sharma, Michael Mykins, Rebecca E. Bergee, Joshua M. Price, Michael A. O’Neil, Nicole Mickels, Megan Von Hagen, James O’Connor, Helen A. Baghdoyan, Ralph Lydic · 2024 · Journal of Neurophysiology
- Vocal Call Locator Benchmark (VCL) for localizing rodent vocalizations from multi-channel audioRalph E. Peterson, Aramis Tanelus, Christopher Ick, Bartul Mimica, Niegil Francis, Violet J. Ivan, Aman Choudhri, Annegret L. Falkner, Mala Murthy, David M. Schneider et al. · 2024 · neural information processing systems
- The visual representation of space in the primate brainStefan Dowiasch, André Kaminiarz, Frank Bremmer · 2022 · e-Neuroforum
- Zebrafish Meets the Ising Model: Statistical Mechanics of Collective Fish MotionHirokazu Tanaka · 2023 · Lecture notes in computer science
- The private life of the brain: issues and promises in the neuroscientific study of internal statesHéloïse Athéa, Nicolas Heck, Denis Forest · 2024 · Synthese
- Beyond the Illusion of Controlled Environments: How to Embrace Ecological Pertinence in Research?Cassandre Vielle · 2025 · European Journal of Neuroscience
- On growth and form of animal behaviorIlan Golani, Neri Kafkafi · 2025 · Frontiers in Integrative Neuroscience
- A new approach to quantify information in real-life, complex neuroscience processes. Comment on “Kinematic coding: Measuring information in naturalistic behavior” by Becchio, Pullar, Scaliti and PanzeriAna Sanchez Jimenez, Enrique Fernández Serra, Rodrigo Quian Quiroga · 2025 · Physics of Life Reviews
- Emergence of BrainsWilliam Bialek · 2025 · PRX Life
- Neuroscience needs behavior: inferring psychophysical strategy trial by trialHendrikje Nienborg, Emily E. Meyer · 2021 · Neuron
- A new angle on odor trail trackingSiddharth Jayakumar, Venkatesh N. Murthy · 2022 · Proceedings of the National Academy of Sciences
- Deep Behavioral Phenotyping Of Mouse Autism Models using Open-Field BehaviorUgne Klibaite, Mikhail Kislin, Jessica L. Verpeut, Xiaoting Sun, Joshua W. Shaevitz, Samuel S.‐H. Wang · 2021 · DataSpace
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- Elucidating the Hierarchical Nature of Behavior with Masked AutoencodersLucas Stoffl, Andy Bonnetto, Stéphane d’Ascoli, Alexander Mathis · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
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- Behavioral alignment as an organizing principle in sensory codingShuhong Huang, Rubén Portugues, James E. Fitzgerald · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
- Learning Keypoints for Multi-Agent Behavior Analysis using Self-SupervisionDaniel Khalil, Christina Liu, Pietro Perona, Jennifer J. Sun, Markus Marks · 2025 · IEEE Winter Conference on Applications of Computer Vision
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