Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer’s Disease Progression
Bai, Bing, Wang, Xusheng, Li, Yuxin, Chen, Ping-Chung, Yu, Kaiwen, Dey, Kaushik Kumar, Yarbro, Jay M., Han, Xian +26 more·2020·Neuron
Cited by (605)
Items 301–400 of 605
- Multiple Roles of Paeoniflorin in Alzheimer's DiseaseZeyu Meng, Huize Chen, Chujun Deng, Sheng-Xi Meng · 2022 · Evidence-Based Complementary and Alternative Medicine
- The emerging role of the HTRA1 protease in brain microvascular diseaseChristof Haffner · 2023 · Frontiers in Dementia
- Dynamic Phosphoproteomics of BRS3 Activation Reveals the Hippo Signaling Pathway for Cell MigrationMiao Guo, Yan Zhang, Lehao Wu, Sheng Ye, Jiaqi Zhao, Zeyuan Wang, Huiyu Wang, Lu Zhang, Hua Xiao · 2023 · Journal of Proteome Research
- Novel cuproptosis metabolism-related molecular clusters and diagnostic signature for Alzheimer’s diseaseFang Jia, Wanhong Han, Shuang‐Qi Gao, Jian‐Wei Huang, Wujie Zhao, Zhenwei Lu, Wenpeng Zhao, Zhangyu Li, Zhanxiang Wang, Ying Guo · 2024 · Frontiers in Molecular Biosciences
- Using in vivo intact structure for system-wide quantitative analysis of changes in proteinsAhrum Son, Hyunsoo Kim, Jolene K. Diedrich, Casimir Bamberger, Daniel B. McClatchy, Stuart A. Lipton, John R. Yates · 2024 · Nature Communications
- GADD45G operates as a pathological sensor orchestrating reactive gliosis and neurodegenerationTianjin Shen, Wenjiao Tai, Dongfang Jiang, Shuaipeng Ma, Xiaoling Zhong, Yuhua Zou, Chun‐Li Zhang · 2025 · Neuron
- Cognitive Resilience in Preclinical Alzheimer's Disease: Higher Nptx2 and Vgf Levels are Associated with Reduced Cognitive DeclineClaire L. Anderson, Alden L. Gross, Corinne A. Pettigrew, Juan P. Vazquez, Abhay Moghekar, Sungtaek Oh, Chan Hyun Na, Marilyn Albert, Paul F. Worley, Anja Soldan · 2025 · Neurobiology of Aging
- PROTAC repurposing uncovers a noncanonical binding surface that mediates chemical degradation of nuclear receptorsAndrew D. Huber, Wenwei Lin, Kwan‐Young Jung, Shyaron Poudel, Guangwei Yang, Jing Wu, Allison Carrigan, Vishwajeeth Pagala, Wei Wang, Yingxue Fu et al. · 2025 · Nature Communications
- A double-edged sword: Exploring the neuroprotective/damaging mechanisms of complement activation in Alzheimer's diseaseJie Wang, Jie Wu, Xiaoxi Ma, Yuhan Wu, Zhenxu Xiao, Xiao‐Wen Zhou, Ding Ding, Qianhua Zhao · 2025 · Aging and Health Research
- A Standardized Brain Molecular Atlas: A Resource for Systems Modeling and SimulationPolina Shichkova, Jay S. Coggan, Henry Markram, Daniel X. Keller · 2021 · Frontiers in Molecular Neuroscience
- Hippocampal proteomic changes in high-fat diet-induced obese mice associated with memory declinePing Lu, Cun-Xiu Gao, Fei-Jian Luo, Yu-Ting Huang, Mei‐Mei Gao, Yue‐Sheng Long · 2023 · The Journal of Nutritional Biochemistry
- Transforming neurodegenerative disorder care with machine learning: Strategies and applicationsAya A. Galal, Ahmed A. Moustafa, Mohamed Salama · 2025 · Neuroscience
- Post‐translational modifications linked to preclinical Alzheimer's disease–related pathological and cognitive changesOlamide Abiose, Jarod Rutledge, Patricia Morán Losada, Michaël E. Belloy, Edward N. Wilson, Zihuai He, Alexandra N. Trelle, Divya Channappa, America Romero, Jennifer Park et al. · 2023 · Alzheimer s & Dementia
- The effect of effort on reward prediction error signals in midbrain dopamine neuronsShingo Tanaka, Jessica Elizabeth Taylor, Masamichi Sakagami · 2021 · Current Opinion in Behavioral Sciences
- Identifying Hub Genes and miRNAs Associated with Alzheimer’s Disease: A Bioinformatics Pathway to Novel Therapeutic StrategiesElisa Gascón, Ana Cristina Calvo, Nora Molina, P. Zaragoza, Rosario Osta · 2024 · Biomolecules
- Neuronal guidance signaling in neurodegenerative diseases: Key regulators that function at neuron-glia and neuroimmune interfacesJunichi Yuasa‐Kawada, Mariko Kinoshita-Kawada, Masaki Hiramoto, Satoru Yamagishi, Takayasu Mishima, Shin’ichiro Yasunaga, Yoshio Tsuboi, Nobutaka Hattori, Jane Y. Wu · 2025 · Neural Regeneration Research
- Activity-dependent synthesis of Emerin gates neuronal plasticity by regulating proteostasisYi Xie, Ruoxi Wang, Daniel B. McClatchy, Yuanhui Ma, Jolene K. Diedrich, Manuel Sánchez-Alavez, Michael Petrascheck, John R. Yates, Hollis T. Cline · 2025 · Cell Reports
- Affinity peptide ligands: new tools for chasing non-canonical N -phosphoproteomeHe Wang, Xiaoyu Zhang, Dongdong Wang, Qianqian Jiang, Yue Sun, Baofeng Zhao, Zhen Liang, Guangyan Qing, Bo Jiang, Lihua Zhang et al. · 2025 · Chemical Science
- Plasma proteomic analysis of intermuscular fat links muscle integrity with processing speed in older adultsToshiko Tanaka, Caterina Rosano, Xiaoning Huang, Qu Tian, Bennett A. Landman, Ann Zenobia Moore, Iva Miljkovic, Andrew Perry, Sadiya S. Khan, Ravi Kalhan et al. · 2025 · Alzheimer s & Dementia
- -Omics approaches to study and model cell-cell interactions in engineered tissuesChristine Stark, Sarah E. Jenison, Mai T. Ngo · 2025 · Frontiers in Chemical Engineering
- Lipidomics and proteomics: An integrative approach for early diagnosis of dementia and Alzheimer’s diseaseVirendra Tiwari, Shubha Shukla · 2023 · Frontiers in Genetics
- Urinary protein biomarkers based on LC–MS/MS analysis to discriminate vascular dementia from Alzheimer’s disease in Han Chinese populationRuijuan Chen, Yuanjing Yi, Wenbiao Xiao, Bowen Zhong, Le Zhang, Yi Zeng · 2023 · Frontiers in Aging Neuroscience
- Alzheimer’s disease protein relevance analysis using human and mouse model proteomics dataCathy Shi, William Kirby Gottschalk, Carol A. Colton, Sayan Mukherjee, Michael William Lutz · 2023 · Frontiers in Systems Biology
- Degeneration Directory: a multi-omics web resource for degenerative diseasesHaoteng Yan, Changfa Lu, Chen-Yang Lan, Si Wang, Wei-Qi Zhang, Zan He, Jing-Hao Hu, Jiaqi Ai, Guang-Hui Liu, Shuai Ma et al. · 2023 · Protein & Cell
- CSF neurosecretory proteins VGF and neuroserpin in patients with Alzheimer's and Lewy body diseasesLorenzo Barba, Giovanni Bellomo, Patrick Oeckl, Davide Chiasserini, Lorenzo Gaetani, Edoardo Guido Torrigiani, Federico Paolini Paoletti, Petra Steinacker, Samir Abu‐Rumeileh, Lucilla Parnetti et al. · 2024 · Journal of the Neurological Sciences
- Comparative proteomic profiling reveals a pathogenic role for the O‐GlcNAcylated AIMP2–PARP1 complex in aging‐related hepatic steatosis in miceRenlong Li, Yan Li, Miaomiao Tian, Haohao Zhang, Lijun Lou, Kun Liu, Jiehao Zhang, Yu Zhao, Jing Zhang, Shuangshuang Le et al. · 2021 · FEBS Letters
- Evaluation of a Pooling Chemoproteomics Strategy with an FDA-Approved Drug LibraryHuan Sun, Ka Yang, Xue Zhang, Yingxue Fu, Jay M. Yarbro, Zhiping Wu, Ping‐Chung Chen, Taosheng Chen, Junmin Peng · 2022 · Biochemistry
- A synaptic-astrocytic proteomic signature associated with synaptopathy in Alzheimer’s DiseaseJessica Griffiths, Eléonore Schneegans, Harry J. Whitwell, Zhen Qiu, Beverley Notman, To Ka Dorcas Cheung, Nanet Willumsen, Paul McMahan Matthews, Seth G. N. Grant, Johanna Jackson · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- GPR34 regulates microglia state and loss-of-function rescues TREM2 metabolic dysfunctionKarthik Raju, David A. Joy, Sophia M. Guldberg, Kyla Germain, Neal S. Gould, Connie Ha, David Tatarakis, Jason C. Dugas, Sonnet S. Davis, Audrey G. Reeves et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Molecular subtyping based on hippocampal cryptic exon burden reveals proteome-wide changes associated with TDP-43 pathology across the spectrum of LATE and Alzheimer’s DiseaseAdam N. Trautwig, Anantharaman Shantaraman, Mingee Chung, Eric B. Dammer, Lingyan Ping, Duc M. Duong, Leonard Petrucelli, Michael Emmerson Ward, Jonathan D. Glass, Peter T. Nelson et al. · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Integrative network analysis reveals novel moderators of Aβ-Tau interaction in Alzheimer's diseaseKitani, Akihiro, Matsui, Yusuke, for the Alzheimer’s Disease Neuroimaging Initiative · 2025 · Alzheimer's Research & Therapy
- Pan-neurodegeneration proteomics reveals disease subtypes and molecular signaturesHim K. Shrestha, Huan Sun, Jay M. Yarbro, DongGeun Lee, Danting Liu, Erming Wang, Meghan G. McReynolds, Nan Zhang, Boer Xie, Shu Yang et al. · 2026 · Cell
- Transcriptional and epigenetic regulation of autophagy: mechanisms, disease relevance and therapeutic opportunitiesJieun Seo, Seo‐Young Park, Dong Chul Lee, Wonbeak Yoo, Yong Ryoul Yang, Hwi Won Seo, Jong Lyul Park, Jae‐Yeol Joo, Kyung Chan Park, Sangwon Byun · 2026 · Signal Transduction and Targeted Therapy
- Transmembrane protein 184B (TMEM184B) promotes expression of synaptic gene networks in the mouse hippocampusElizabeth B. Wright, Erik G. Larsen, Cecilia M. Coloma-Roessle, Hannah R. Hart, Martha R. C. Bhattacharya · 2023 · BMC Genomics
- Associations between the multitrajectory neuroplasticity of neuronavigated rTMS‐mediated angular gyrus networks and brain gene expression in AD spectrum patients with sleep disordersWeina Yao, Xinle Hou, Huijuan Zhou, Shengqi You, Tingyu Lv, Haifeng Chen, Zhiyuan Yang, Chang Chen, Feng Bai · 2024 · Alzheimer s & Dementia
- Involvement of the VGF/BDNF axis in the neuropathology of Alzheimer’s disease and its potential role in diagnosis and treatmentElizabeth Colín-Martínez, Clorinda Arias · 2024 · Reviews in the Neurosciences
- Superhydrophilic Nanostructured Microparticles for Enhanced Phosphoprotein Enrichment from Alzheimer’s Disease BrainDanyi Shang, Yongyang Song, Yun Cui, Cheng Chen, Feifei Xu, Congcong Zhu, Xuefang Dong, Yifan Chen, Shutao Wang, Xiuling Li et al. · 2025 · ACS Nano
- Characterization of a dual degrader of MDM2 and GSPT1Ira Tandon, Paulina N. Esguerra, Chunrong Li, Huan Sun, Ka Yang, Zhongrui Zhang, Junmin Peng, Weiping Tang · 2025 · European Journal of Medicinal Chemistry
- Isomerized Aβ in the brain can distinguish the status of amyloidosis in the Alzheimer’s disease spectrumSoumya Mukherjee, Reid A. Coyle, Céline Dubois, Keyla A. Perez, Catriona McLean, Colin Louis Masters, Blaine Russell Roberts · 2025 · Acta Neuropathologica
- Highly efficient enrichment of intact phosphoproteins by a cadmium ion‐based co‐precipitation strategyJiangfeng Li, Chongyuan Fan, Yating Yao · 2022 · Journal of Separation Science
- Dysregulated Protein Phosphorylation in a Mouse Model of FTLD-TauIsidró Ferrer, Pol Andrés‐Benito, Karina Ausín, Paz Cartas‐Cejudo, Mercedes Lachén‐Montes, José Antonio del Rı́o, Joaquín Fernández‐Irigoyen, Enrique Santamaría · 2022 · Journal of Neuropathology & Experimental Neurology
- In-Depth Blood Proteome Profiling by Extensive Fractionation and Multiplexed Quantitative Mass SpectrometryXue Zhang, Huan Sun, Zhen Wang, Suiping Zhou, Yingxue Fu, Anthony A. High, Junmin Peng · 2023 · Methods in molecular biology
- An intelligent algorithm of amyloid plucks to timely fault-predicting and contending dependability in IoMTAmir Masoud Rahmani, Seyedeh Yasaman Hosseini Mirmahaleh · 2023 · Expert Systems with Applications
- Detecting differential transcript usage in complex diseases with SPITBeril Erdogdu, Ales Varabyou, Stephanie C. Hicks, Steven L. Salzberg, Mihaela Pertea · 2024 · Cell Reports Methods
- Profiling Protein–Protein Interactions in the Human Brain by Refined Cofractionation Mass SpectrometryHim K. Shrestha, Dong Geun Lee, Zhiping Wu, Zhen Wang, Yingxue Fu, Xusheng Wang, Geidy E. Serrano, Thomas G. Beach, Junmin Peng · 2024 · Journal of Proteome Research
- Advances in human brain proteomics analysis of neurodegenerative diseasesYashuang Chen, Xia Wang, Benhong Xu · 2022 · Human Brain
- Proteomics Profiling Reveals Regulation of Immune Response to Salmonella enterica Serovar Typhimurium Infection in MiceHe Huang, Zachary Even, Zhihan Wang · 2022 · Infection and Immunity
- Predicting gene regulatory networks from multi-omics to link genetic risk variants and neuroimmunology to Alzheimer’s disease phenotypesSaniya Khullar, Daifeng Wang · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Longitudinal multi-omics reveals pathogenic TSC2 variants disrupt developmental trajectories of human cortical organoids derived from Tuberous Sclerosis ComplexWeibo Niu, Shaojun Yu, Xiangru Li, Zhen Wang, Rui Chen, Christina Michalski, Arman Jahangiri, Youssef M. Zohdy, Joshua J. Chern, Ted J. Whitworth et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- Histone demethylase PHF2 regulates inflammatory genes in Alzheimer’s diseaseGuojun Yang, Yong Ren, Ping Zhong, P. Patel, Xiao-Qing Chen, Lei Wan, Young Ho Lee, Komal Saleem, Jian Feng, Zhen Yan · 2025 · Molecular Psychiatry
- Amyloid-ID: photocatalytic profiling of amyloid deposits in Alzheimer’s disease tissueHuan Feng, Qun Zhao, Fangliang Guo, Jing Yan, Nan Zhao, Junbao Ma, Rui Xue Sun, Kaini Shen, Yusong Ge, Xin Zhang et al. · 2026 · Nature Communications
- Limitations and opportunities in multi-omics integration for neurodevelopmental, neurodegenerative and psychiatric disorders: A systematic reviewLuiza Marques Prates Behrens, Guilherme da Silva Fernandes, Gabriela Flores Gonçalves, Franklin Vinny Medina Nunes, Rafael Diogo Weimer, José Cláudio Fonseca Moreira, Márcio Dorn · 2026 · Neuroscience
- Insolubilome profiling defines molecular features that influence protein insolubility with agingAnna Stephan, Flávia A. Graça, Vishwajeeth Pagala, Liam C. Hunt, Chia-Lung Chuang, John Grime, Daniel Alford, Xusheng Wang, Anthony A. High, Junmin Peng et al. · 2026 · Developmental Cell
- Plasma Proteomic Analysis for Alzheimer’s Disease Biomarkers, Pathways, and Subgroup IdentificationCarmen Peña‐Bautista, Lourdes Álvarez‐Sánchez, Ángel Balaguer, Laura Ferré‐González, Mar Peretó, Miguel Baquero, Consuelo Cháfer‐Pericás · 2025 · Journal of Proteome Research
- Hybrid Excitable Spiking Neural Network for Cardiovascular Disease PredictionAsif Mehmood, Muhammad Javed Iqbal · 2023 · IEEE Access
- Unveiling Potential Biomarkers in Cerebrospinal Fluid for Amyloid Pathological Positivity in Non-Demented IndividualsFanhui Meng, Xiang Zhang · 2024 · The Journal of Prevention of Alzheimer s Disease
- Dysregulated Brain Protein Phosphorylation Linked to Increased Human Tau Expression in the hTau Transgenic Mouse ModelIsidró Ferrer, Pol Andrés‐Benito, Karina Ausín, Paz Cartas‐Cejudo, Mercedes Lachén‐Montes, José Antonio del Rı́o, Joaquín Fernández‐Irigoyen, Enrique Santamaría · 2022 · International Journal of Molecular Sciences
- Identification of Novel Kinases of Tau Using Fluorescence Complementation Mass Spectrometry (FCMS)Der‐Shyang Kao, Yanyan Du, Andrew G. DeMarco, Sehong Min, Mark C. Hall, Jean‐Christophe Rochet, W. Andy Tao · 2022 · Molecular & Cellular Proteomics
- An in-silico approach to studying a very rare neurodegenerative disease using a disease with higher prevalence with shared pathways and genes: Cerebral adrenoleukodystrophy and Alzheimer’s diseaseYu Jeong Shim, Min Kyoung Shin, Junghyun Jung, Bongseong Koo, Wonhee Jang · 2022 · Frontiers in Molecular Neuroscience
- Proteomic analysis of extracellular vesicles in cerebrospinal fluid of patients with Alzheimer’s diseaseDavide Chiasserini, Irene V. Bijnsdorp, Giovanni Bellomo, Pier Luigi Orvietani, Sander R. Piersma, Thang V. Pham, Lucilla Parnetti, Connie R. Jiménez · 2020 · medRxiv
- Unbiased Classification of the Human Brain Proteome Resolves Distinct Clinical and Pathophysiological Subtypes of Cognitive ImpairmentLenora A. Higginbotham, Kathleen Carter, Eric B. Dammer, Rafi U. Haque, Erik C. B. Johnson, Duc M. Duong, Luming Yin, Philip L. De Jager, David Alan Bennett, James J. Lah et al. · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- A beginner’s guide into curated analyses of open access datasets for biomarker discovery in neurodegenerationDiana Gomes Moreira, Asad Jan · 2023 · Scientific Data
- Therapeutically targeting the classical complement pathway with antisense oligonucleotides in Alzheimer’s diseaseYuanyuan Wang, Tiffany Z. Wu, Alvin Gogineni, Ming‐Chi Tsai, Lukasz Jan Kielpinski, Anubha Mahajan, Shristi Pandey, Luis F. Schachner, John C. Tran, Cong Wu et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- A compilation of reported alterations in the cerebrospinal fluid proteome in Alzheimer's diseaseMatthijs B. de Geus, Angus Clark Nairn, Steven Edward Arnold, Becky C. Carlyle · 2025 · Brain Communications
- Activation of a nongenetic AHR-ELMSAN1 axis optimizes BET-targeting therapy and suppresses leukemia stem cells in preclinical modelsXinyue Zhou, Steven Moreira, Cecilia Restelli, Hong Wang, Soheil Jahangiri, Sajesan Aryal, Emily Tsao, Pengcheng Zhang, Mingming Niu, Harish Kumar et al. · 2025 · Science Translational Medicine
- The serine protease HTRA1 targets tau fibrils and provides a proteolytic barrier against pathogenic protein conformationsBirte Hagemeier, Kamilla Ripkens, Nina Schulze, Anika Bluemke, Michal Strzala, Michelle Koci, Farnusch Kaschani, Markus Kaiser, Michael Erkelenz, Sebastian Schluecker et al. · 2025 · Journal of Biological Chemistry
- Integrative analysis of proteomic and MRI data reveals protein associations with brain imaging features in Alzheimer’s diseaseSotiroula Afxenti, Marilena M. Bourdakou, Eleni M. Loizidou, Margarita Zachariou, Anastasia Lambrianides, Marios Pantzaris, George M. Spyrou · 2025 · Expert Review of Proteomics
- Longitudinal plasma proteomics: relation to incident Alzheimer's disease dementia and biomarkersEun Hye Lee, Yen-Ning Huang, Tamina Park, Shiwei Liu, Nicholas K. Adzibolosu, Soumilee Chaudhuri, Changgee Chang, Paula J. Bice, Jeffrey L. Dage, Jared R. Brosch et al. · 2025 · Alzheimer s & Dementia
- Mechanism of platelet-rich plasma in improving cyclophosphamide-induced premature ovarian failure in ratsTing Zhao, Xiao Xiao, Lingchuan Li · 2025 · Stem Cell Research & Therapy
- A Review of Neuroproteomics in Neurological Disorders: The Use of Machine Learning and Deep LearningGowthami Mahendran, Priyankan Kirupaharan · 2026 · Sci
- Analyzing the glial proteome in Alzheimer’s diseaseJong‐Heon Kim, Ruqayya Afridi, Won‐Ha Lee, Kyoungho Suk · 2023 · Expert Review of Proteomics
- Impact of Preanalytical Procedures on Complement Biomarkers in Cerebrospinal Fluid and Plasma from Controls and Alzheimer’s Disease PatientsJohnny Gutierrez, Carolin Kurz, Cosme Sandoval, Rose Edmonds, Tobias Bittner, Robert Perneczky, Anne Biever · 2024 · Journal of Alzheimer s Disease
- Multiomics from Alzheimer’s Brains and Mesenchymal Stem Cell-Derived Extracellular Vesicles Identifies Therapeutic Potential of Specific Subpopulations to Target Mitochondrial ProteostasisMorteza Abyadeh, Alaattin Kaya · 2025 · Journal of Central Nervous System Disease
- Unveiling the role of PSD95 phosphorylation after traumatic brain injury: insights from phosphoproteomic analysisZhong-Xian Zhang, Junpeng Gao, Gang Li, Jin-eheng Cheng, Jiang-Tao Yu, Peng-Cheng Wang, Rui-Ning Liu, Cheng Jiang, Hao-Li Ma, Yan Zhao · 2025 · BMC Neurology
- Death-associated protein kinase 1-dependent SENP1 degradation increases tau SUMOylation and leads to cognitive dysfunction in a mouse model for tauopathyXindong Shui, Xiaoqing Zheng, Jinfeng Wu, Mi Zhang, Gamin Kim, Renxuan Chen, Lianlian Peng, Zonghai Wang, Yameng Zheng, Ling Zhang et al. · 2025 · Molecular Neurodegeneration
- Presenilin Deficiency Increases Susceptibility to Oxidative Damage in FibroblastsKun Zou, Sadequl Islam, Yang Sun, Yuan Gao, Tomohisa Nakamura, Hiroto Komano, Taisuke Tomita, Makoto Michikawa · 2022 · Frontiers in Aging Neuroscience
- Translational proteomics and phosphoproteomics: Tissue to extracellular vesiclesXiaofeng Wu, Anton B. Iliuk, W. Andy Tao · 2022 · Advances in clinical chemistry
- Strategies for translating proteomics discoveries into drug discovery for dementiaAditi Halder, Eleanor Drummond · 2023 · Neural Regeneration Research
- Subcellular proteomics insights into Alzheimer's disease developmentZhiyuan Liang, Hongbin Zhuang, Xueshan Cao, Guanwei Ma, Liming Shen · 2023 · PROTEOMICS - CLINICAL APPLICATIONS
- Exploring the brain epitranscriptome: perspectives from the NSAS summitSungmin Lee, Bonsang Koo, Clément Carré, André Fischer, Chuan He, Ajeet Kumar, Kathy Liu, Kate D. Meyer, Guo‐li Ming, Junmin Peng et al. · 2023 · Frontiers in Neuroscience
- Secreted Glycoproteins That Regulate Synaptic Function: the Dispatchers in the Central Nervous SystemHaiying Gong, Conglei Zhu, Di Han, Sen Liu · 2023 · Molecular Neurobiology
- Proteomic Signaling of Dual-Specificity Phosphatase 4 (DUSP4) in Alzheimer’s DiseaseErming Wang, Allen L. Pan, Pritha Bagchi, Srikant Rangaraju, Nicholas T. Seyfried, Michelle E. Ehrlich, Stephen R. Salton, Bin Zhang · 2024 · Biomolecules
- Signaling pathways in the treatment of Alzheimer’s disease with acupuncture: a narrative reviewChao Ke, Shengtao Shan, Yan Tan, Yang Cao, Zhengrong Xie, Senjie Shi, Jiang Pan, Wei Zhang · 2024 · Acupuncture in Medicine
- Identification of key proteins in early-onset Alzheimer’s disease based on WGCNADazhi Li, Yaxin Wang, Jinliang Wang, Qiqiang Tang · 2024 · Frontiers in Aging Neuroscience
- Oligodendrocytes, the Forgotten Target of Gene TherapyYasemin Ozgür-Gunes, Catherine Le Stunff, Pierre F Bougneres · 2024 · Cells
- Effects of U1 Small Nuclear Ribonucleoprotein Inhibition on the Expression of Genes Involved in Alzheimer’s DiseaseWenbo Zhu, Xuefei Wei, Yanyan Wang, Jingjing Li, Peng Lü, Kui Zhang, Bing Bai · 2020 · ACS Omega
- An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patientsLoren Ornelas, Emilda Gomez, Lindsay Panther, Aaron P. Frank, Susan Lei, Berhan Mandefro, Maria G. Bañuelos, Brandon Shelley, Julia Kaye, Leandro de Araújo Lima et al. · 2020 · bioRxiv (Cold Spring Harbor Laboratory)
- Neural activity tracking identity and confidence in social informationNadescha Trudel, Matthew F. S. Rushworth, Marco K. Wittmann · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Supervised machine learning with feature selection for prioritization of targets related to time-based cellular dysfunction in agingNina Truter, Zuné Jansen van Rensburg, Radouane Oudrhiri, Raminderpal Singh, Carla Louw · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- PriOmics: integration of high-throughput proteomic data with complementary omics layers using mixed graphical modeling with group priorsRobin Kosch, Katharina Limm, Annette M. Staiger, Nadine S. Kurz, Nicole Seifert, Bence Oláh, Stefan Solbrig, Marita Ziepert, Emil Chteinberg, Rainer Spang et al. · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Quantitative analysis of proteostasis networks: are there applications for dementia?Daniel B. McClatchy · 2024 · Expert Review of Proteomics
- Genetic and pathway complexity in Alzheimer’s disease: Insights from multi-omic data about the immune response and mitochondrial functionXuan Xu, Jiang Li, Fei Wang, Ke Xue, Junwen He, Xiangyu Meng, Yin Shen · 2025 · Neural Regeneration Research
- JUMPshiny: A User‐Friendly Platform for Comprehensive Analysis and Visualization of Quantitative Proteomics DataAijun Zhang, Yingxue Fu, Zuo‐Fei Yuan · 2025 · PROTEOMICS
- Nanoscopic Mapping of the Extracellular Space in Amyloid Plaque‐rich CortexJuan Estaún‐Panzano, Yulia Dembitskaya, Ivo Calaresu, Somen Nandi, Quentin Gresil, Évelyne Doudnikoff, Thierry Lesté-Lasserre, Thierry Amédée, Laurent Cognet, Laurent Groc et al. · 2025 · Advanced Science
- Loss of mouse C19orf12 homolog disturbs tubular ER homeostasis and leads to neuroaxonal dystrophyFengqin Wu, Sandra L. Siedlak, Sabina Bhatta, S Khaled, Changjuan Shao, Sandy L. Torres, Hisashi Fujioka, Wenzhang Wang · 2025 · Acta Neuropathologica Communications
- Network-level organization of systemic inflammation reflects early Alzheimer’s-like behavioral changesMacy A. Seijo, Anisha Banerjee, Caesar M. Hernandez · 2025 · Scientific Reports
- Congo Red Derived Covalent Proteotyping Sensor for Amyloid Deposits in Alzheimer’s DiseaseHuan Feng, Rui Gao, Fangliang Guo · 2025 · ACS Sensors
- Deciphering the rules of regulated cell death subroutines by in silico methodsLu Zhang, Yingying Dai, Qingzhu Li, Xian Jiang, Gu He · 2025 · Journal of Advanced Research
- NRN1 as a therapeutic target for Alzheimer's diseaseDerian A. Pugh, G. Cary, Kelsey M. Greathouse, L. Nassour-Caswell, Emma L. Hobby, N. Seyfried, Jeremy H. Herskowitz · 2026 · Alzheimer's & Dementia
- Subtyping based on hippocampal cryptic exon burden reveals proteome-wide changes associated with TDP-43 and Alzheimer’s disease pathologyAdam N. Trautwig, Anantharaman Shantaraman, Mingee Chung, Eric B. Dammer, Lingyan Ping, Duc M. Duong, Caroline M Watson, Leonard Petrucelli, Michael Emmerson Ward, Jonathan D. Glass et al. · 2026 · Cell Reports