The DOI matches its Crossref record; 43 of the 43 references it cites were found in a registry or an index.
Alterations in DNA methylation of Fkbp5 as a determinant of blood–brain correlation of glucocorticoid exposure
Open accessAbstract
Background Epigenetic studies that utilize peripheral tissues to identify molecular substrates of neuropsychiatric disorders rely on the assumption that disease-relevant, cellular alterations that occur in the brain are mirrored and detectable in peripheral tissues such as blood. We sought to test this assumption by using a mouse model of Cushing's disease and asking whether epigenetic changes induced by glucocorticoids can be correlated between these tissue types. Methods Mice were treated with different doses of glucocorticoids in their drinking water for four weeks to assess gene expression and DNA methylation (DNAm) changes in the stress response gene Fkbp5. Results Significant linear relationships were observed between DNAm and four-week mean plasma corticosterone levels for both blood (R(2)=0.68, P=7.1×10(-10)) and brain (R(2)=0.33, P=0.001). Further, degree of methylation change in blood correlated significantly with both methylation (R(2)=0.49, P=2.7×10(-5)) and expression (R(2)=0.43, P=3.5×10(-5)) changes in hippocampus, with the notable observation that methylation changes occurred at different intronic regions between blood and brain tissues. Conclusion Although our findings are limited to several intronic CpGs in a single gene, our results demonstrate that DNA from blood can be used to assess dynamic, glucocorticoid-induced changes occurring in the brain. However, for such correlation analyses to be effective, tissue-specific locations of these epigenetic changes may need to be considered when investigating brain-relevant changes in peripheral tissues.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
The source backs part of the claim, not all of it — or backs it for a different population, condition or comparison.
In the citing paper
“Previous work indicates some overlap between MDD-associated differentially methylated regions (DMRs) in blood and the MDD-associated DMRs in the prefrontal cortex and other brain regions.82–85”
From Epigenetic regulation in major depression and other stress-related disorders: molecular mechanisms, clinical relevance and therapeutic potential (2023) · cites this paper as [83]
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
R: A Language and Environment for Statistical Computing
R Core Team (2000) · doi:10.32614/r.manuals · Cited by 355,893
DNA methylation arrays as surrogate measures of cell mixture distribution
Houseman, E. A., Accomando, W. P., Koestler, D. C., Christensen, B. C., Marsit, C. J., Nelson, H. H., Wiencke, J. K., & Kelsey, K. T. (2012) · BMC Bioinformatics · doi:10.1186/1471-2105-13-86 · Cited by 3,175
Irizarry, R. A., Ladd-Acosta, C., Wen, B., Wu, Z., Montano, C., Onyango, P., Cui, H., Gabo, K., Rongione, M., Webster, M., et al. (2009) · Nature Genetics · doi:10.1038/ng.298 · Cited by 2,177
Self-citationMcEwen, B. S., & Gianaros, P. J. (2010) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2009.05331.x · Cited by 1,715
Allele-specific FKBP5 DNA demethylation mediates gene–childhood trauma interactions
Klengel, T., Mehta, D., Anacker, C., Rex-Haffner, M., Pruessner, J. C., Pariante, C. M., Pace, T. W. W., Mercer, K. B., Mayberg, H. S., Bradley, B., et al. (2013) · Nature Neuroscience · doi:10.1038/nn.3275 · Cited by 1,447
High-Resolution Mapping and Characterization of Open Chromatin across the Genome
Boyle, A. P., Davis, S., Shulha, H. P., Meltzer, P., Margulies, E. H., Weng, Z., Furey, T. S., & Crawford, G. E. (2008) · Cell · doi:10.1016/j.cell.2007.12.014 · Cited by 1,415
Binder, E. B. (2008) · JAMA · doi:10.1001/jama.299.11.1291 · Cited by 1,362
Binder, E. B., Salyakina, D., Lichtner, P., Wochnik, G. M., Ising, M., Pütz, B., Papiol, S., Seaman, S., Lucae, S., Kohli, M. A., et al. (2004) · Nature Genetics · doi:10.1038/ng1479 · Cited by 977
Aging effects on DNA methylation modules in human brain and blood tissue
Horvath, S., Zhang, Y., Langfelder, P., Kahn, R. S., Boks, M. P., van Eijk, K. R., van den Berg, L. H., & Ophoff, R. A. (2012) · Genome biology · doi:10.1186/gb-2012-13-10-r97 · Cited by 652
Wochnik, G. M., Rüegg, J., Abel, G. A., Schmidt, U., Holsboer, F., & Rein, T. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m407498200 · Cited by 638
Davies, M. N., Volta, M., Pidsley, R., Lunnon, K., Dixit, A., Lovestone, S., Coarfa, C., Harris, R. A., Milosavljevic, A., Troakes, C., et al. (2012) · Genome Biology · doi:10.1186/gb-2012-13-6-r43 · Cited by 630
Mehta, D., Klengel, T., Conneely, K. N., Smith, A. K., Altmann, A., Pace, T. W., Rex-Haffner, M., Loeschner, A., Gonik, M., Mercer, K. B., et al. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1217750110 · Cited by 548
Sensitive and quantitative universal Pyrosequencing™ methylation analysis of CpG sites
Colella, S., Shen, L., Baggerly, K., Issa, J. J., & Krahe, R. (2003) · BioTechniques · doi:10.2144/03351md01 · Cited by 514
Allostatic load as a predictor of functional decline
Karlamangla, A. S., Singer, B. H., McEwen, B. S., Rowe, J. W., & Seeman, T. E. (2002) · Journal of Clinical Epidemiology · doi:10.1016/s0895-4356(02)00399-2 · Cited by 483
Guintivano, J., Aryee, M. J., & Kaminsky, Z. A. (2013) · Epigenetics · doi:10.4161/epi.23924 · Cited by 384
Hypercortisolemia and depression
Gillespie, C. F., & Nemeroff, C. B. (2005) · Psychosomatic Medicine · doi:10.1097/01.psy.0000163456.22154.d2 · Cited by 361
Adolescent Stress–Induced Epigenetic Control of Dopaminergic Neurons via Glucocorticoids
Niwa, M., Jaaro-Peled, H., Tankou, S., Seshadri, S., Hikida, T., Matsumoto, Y., Cascella, N. G., Kano, S.-I., Ozaki, N., Nabeshima, T., et al. (2013) · Science · doi:10.1126/science.1226931 · Cited by 318
Fardet, L., Petersen, I., & Nazareth, I. (2012) · American Journal of Psychiatry · doi:10.1176/appi.ajp.2011.11071009 · Cited by 287
Roy, A., Gorodetsky, E., Yuan, Q., Goldman, D., & Enoch, M.-A. (2010) · Neuropsychopharmacology · doi:10.1038/npp.2009.236 · Cited by 282
Lee, R. S., Tamashiro, K. L. K., Yang, X., Purcell, R. H., Harvey, A., Willour, V. L., Huo, Y., Rongione, M., Wand, G. S., & Potash, J. B. (2010) · Endocrinology · doi:10.1210/en.2010-0225 · Cited by 275
Self-citationGlucocorticoids Can Induce PTSD-Like Memory Impairments in Mice
Kaouane, N., Porte, Y., Vallée, M., Brayda-Bruno, L., Mons, N. E., Calandreau, L., Marighetto, A., Piazza, P. V., & Desmedt, A. (2012) · Science · doi:10.1126/science.1207615 · Cited by 271
Dorn, L. D., Burgess, E. S., Friedman, T. C., Dubbert, B., Gold, P. W., & Chrousos, G. P. (1997) · The Journal of Clinical Endocrinology & Metabolism · doi:10.1210/jcem.82.3.3834 · Cited by 260
Child abuse and epigenetic mechanisms of disease risk
Yang, B.-Z., Zhang, H., Ge, W., Weder, N., Douglas-Palumberi, H., Perepletchikova, F., Gelernter, J., & Kaufman, J. (2013) · American Journal of Preventive Medicine · doi:10.1016/j.amepre.2012.10.012 · Cited by 256
Scammell, J. G., Denny, W. B., Valentine, D. L., & Smith, D. F. (2001) · General and Comparative Endocrinology · doi:10.1006/gcen.2001.7696 · Cited by 238
Up-regulation of glucocorticoid-regulated genes in a mouse model of Rett syndrome
Nuber, U. A., Kriaučionis, S., Roloff, T. C., Guy, J., Selfridge, J., Steinhoff, C., Schulz, R., Lipkowitz, B., Ropers, H., Holmes, M. C., et al. (2005) · Human Molecular Genetics · doi:10.1093/hmg/ddi229 · Cited by 190
Iwamoto, K., Bundo, M., Ueda, J., Oldham, M. C., Ukai, W., Hashimoto, E., Saito, T., Geschwind, D. H., & Kato, T. (2011) · Genome Research · doi:10.1101/gr.112755.110 · Cited by 189
Roy, A., Hodgkinson, C. A., Luca, V. D., Goldman, D. A., & Enoch, M. (2011) · Journal of Psychiatric Research · doi:10.1016/j.jpsychires.2011.09.009 · Cited by 177
Cumulative Neighborhood Risk of Psychosocial Stress and Allostatic Load in Adolescents
Theall, K. P., Drury, S. S., & Shirtcliff, E. A. (2012) · American Journal of Epidemiology · doi:10.1093/aje/kws185 · Cited by 176
Direct, Androgen Receptor-Mediated Regulation of the FKBP5 Gene via a Distal Enhancer Element
Magee, J. A., Chang, L.-W., Stormo, G. D., & Milbrandt, J. (2006) · Endocrinology · doi:10.1210/en.2005-1001 · Cited by 174
Family-based association of FKBP5 in bipolar disorder
Willour, V. L., Chen, H., Toolan, J., Belmonte, P. L., Cutler, D. J., Goes, F. S., Zandi, P. P., Lee, R. S., MacKinnon, D. F., Mondimore, F. M., et al. (2008) · Molecular Psychiatry · doi:10.1038/sj.mp.4002141 · Cited by 165
Self-citationCushing's Syndrome: A Psychiatric Study of 29 Patients
Cohen, S. I. (1980) · The British Journal of Psychiatry · doi:10.1192/bjp.136.2.120 · Cited by 163
Starkman, M. N., Schteingart, D. E., & Schork, M. (1986) · Psychiatry Research · doi:10.1016/0165-1781(86)90096-x · Cited by 152
Brain-Derived Neurotrophic Factor in Patients with Huntington's Disease
Zuccato, C., Marullo, M., Vitali, B., Tarditi, A., Mariotti, C., Valenza, M., Lahiri, N., Wild, E. J., Sassone, J., Ciammola, A., et al. (2011) · PLoS ONE · doi:10.1371/journal.pone.0022966 · Cited by 138
Glucocorticoid receptor activates poised FKBP51 locus through long-distance interactions
Paakinaho, V., Makkonen, H., Jääskeläinen, T., & Palvimo, J. J. (2010) · Molecular Endocrinology · doi:10.1210/me.2009-0443 · Cited by 122
A measure of glucocorticoid load provided by DNA methylation of Fkbp5 in mice
Lee, R. S., Tamashiro, K. L., Yang, X., Purcell, R. H., Huo, Y., Rongione, M. A., Potash, J. B., & Wand, G. S. (2011) · Psychopharmacology · doi:10.1007/s00213-011-2307-3 · Cited by 109
Self-citationEpigenetic regulation of the glucocorticoid receptor promoter 17in adult rats
Witzmann, S. R., Turner, J. D., Mériaux, S. B., Meijer, O. C., & Muller, C. P. (2012) · Epigenetics · doi:10.4161/epi.22363 · Cited by 90 · cited 1×
“One such study examined the 17 promoter of the glucocorticoid receptor (GR) and reported that the sum of methylation values between whole blood cells and the prefrontal cortex of stressed and unstressed animals show moderate association on a Pearson correlation heat map (Witzmann et al., 2012).”
BackgroundÅberg, K. A., Xie, L. Y., McClay, J. L., Nerella, S., Vunck, S. A., Snider, S. E., Beardsley, P. M., & van den Oord, E. J. C. G. (2013) · Epigenomics · doi:10.2217/epi.13.36 · Cited by 81
Sinclair, D., Fullerton, J. M., Webster, M. J., & Shannon Weickert, C. (2012) · PLoS ONE · doi:10.1371/journal.pone.0031720 · Cited by 71
Baker, C., Richards, L. J., Dayan, C. M., & Jessop, D. S. (2003) · Journal of Neuroendocrinology · doi:10.1046/j.1365-2826.2003.01099.x · Cited by 69
Flitsch, J., Spitzner, S., & Lüdecke, D. K. (2000) · Experimental and Clinical Endocrinology & Diabetes · doi:10.1055/s-2000-8144 · Cited by 56
Rye, M. B., Sætrom, P., Håndstad, T., & Drabløs, F. (2011) · BMC Biology · doi:10.1186/1741-7007-9-80 · Cited by 42
Maranville, J., Baxter, S. S., Witonsky, D., Chase, M., & Rienzo, A. D. (2013) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2013.08.005 · Cited by 28
Hackler, L., Masuda, T., Oliver, V. F., Merbs, S. L., & Zack, D. J. (2012) · Methods in molecular biology · doi:10.1007/978-1-61779-848-1_21 · Cited by 24
Cited by
Sorted by citations
Gene–Stress–Epigenetic regulation of FKBP5: clinical and translational implications
Zannas, A. S., Wiechmann, T., Gassen, N. C., & Binder, E. B. (2016) · Neuropsychopharmacology · doi:10.1038/npp.2015.235 · Cited by 622
The Role of m6A/m-RNA Methylation in Stress Response Regulation
Engel, M., Eggert, C., Kaplick, P. M., Eder, M., Röh, S., Tietze, L., Namendorf, C., Arloth, J., Weber, P., Rex-Haffner, M., et al. (2018) · Neuron · doi:10.1016/j.neuron.2018.07.009 · Cited by 411
Smith, A. K., Kilaru, V., Klengel, T., Mercer, K. B., Bradley, B., Conneely, K. N., Ressler, K. J., & Binder, E. B. (2015) · American Journal of Medical Genetics Part B: Neuropsychiatric Genetics · doi:10.1002/ajmg.b.32278 · Cited by 355
Epigenetics of Stress-Related Psychiatric Disorders and Gene × Environment Interactions
Klengel, T., & Binder, E. B. (2015) · Neuron · doi:10.1016/j.neuron.2015.05.036 · Cited by 353
Palma-Gudiel, H., Córdova-Palomera, A., Leza, J. C., & Fañanás, L. (2015) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2015.05.016 · Cited by 347
Metadata
- Authors
- Ewald, E. R., Wand, G. S., Seifuddin, F., Yang, X., Tamashiro, K. L., Potash, J. B., Zandi, P., & Lee, R. S.
- Affiliations
- Johns Hopkins University (US)
- University of Iowa (US)
- Corresponding author
- Lee, Richard S.
- Venue
- Psychoneuroendocrinology
- Publisher
- Elsevier BV
- Published
- 2014-06
- Volume
- 44
- Pages
- 112-122
- ISSN
- 0306-4530 (ISSN-L)
- PMC
- PMC4047971
- OpenAlex
- W2117041810
- Cited by
- 105
- References
- 43
- Citations by year
- 2026: 3 · 2025: 3 · 2024: 5 · 2023: 6 · 2022: 8 · 2021: 7 · 2020: 10 · 2019: 11 · 2018: 13 · 2017: 15 · 2016: 8 · 2015: 11 · 2014: 5
- FWCI
- 4.91
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Psychoneuroendocrinology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institute on Alcohol Abuse and Alcoholism (UO1 AA020890, K05AA020342, U01AA020890)
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (HD-055030, R00HD055030, K99HD055030)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Epigenetics and DNA Methylation
- Life Sciences › Neuroscience › Behavioral Neuroscience › Stress Responses and Cortisol
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Syndromes and Imprinting
- Keywords
- DNA methylation, FKBP5, glucocorticoids, Cushing's disease, epigenetic biomarkers, corticosterone, hippocampus
- MeSH terms
- Tacrolimus Binding Protein 5, Animals, Brain, Corticosterone, Glucocorticoids, Male, Mice, Inbred C57BL, DNA Methylation, Tacrolimus Binding Proteins, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review