CoChat
Sign Up
Cited by 27Plant Disease Resistance and GeneticsPlant Disease Management TechniquesPlant-Microbe Interactions and Immunity

The DOI matches its Crossref record.

Microbial populations involved in the suppression of Rhizoctonia solani AG1-1B by lignin incorporation in soil

Van Beneden, Sarah, Roobroeck, Dries, França, Soraya C., De Neve, Stefaan, Boeckx, Pascal, Höfte, Monica·2010·Soil Biology and Biochemistry
DOI 10.1016/j.soilbio.2010.04.007
Open this paper in CoChat — free account

Abstract

Rhizoctonia solani causes worldwide losses in numerous crops. Sclerotia of R. solani remain viable for several years in soil and are an important source of primary infection. In this study the effect of soil incorporation of Kraft pine lignin, a side product of the paper industry, on viability of R. solani AG1-1B sclerotia was investigated. The efficacy of lignin was assessed in a sandy loam (Oppuurs) and a silt loam soil (Leest) collected from commercial fields in Belgium. Evaluating sclerotial viability after 4 weeks incubation in the two soils amended with 1% (w/w) Kraft pine lignin demonstrated a soil-dependent effect. In Leest soil the addition of lignin resulted in a significantly reduced sclerotial viability, together with an increased mycoparasitism by Trichoderma spp.; in Oppuurs soil, on the other hand, only a slight and insignificant reduction in sclerotial viability was observed. Based on phospholipid fatty acid analysis, different changes in microbial community structure upon lignin amendment were detected in the two soils. Both amended soils showed a significant increase in Gram negative bacteria. In Leest soil this increase was accompanied with a significantly higher increase in fungi and actinomycetes compared with Oppuurs soil. In addition, Kraft pine lignin resulted in both soils in a small but significant increase in manganese peroxidase activity and this increase tended to be higher in Leest soil. Manganese peroxidase produced by lignin-degrading basidiomycetes has previously been shown to degrade melanin, which protects the sclerotia against biotic and abiotic stress. We hypothesize that lignin-degrading fungi increased the susceptibility of the sclerotia to sclerotial antagonists such as Trichoderma, Gram negative bacteria and actinomycetes. Clearly, the effect observed here did not rely on the stimulation of one microbial group, but is the result of an interaction of different groups.

Overview

Integrity signals

Registry

Crossref · 10.1016/j.soilbio.2010.04.007

Cites

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

We couldn’t retrieve this paper’s full text, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

No references could be resolved yet.

Research works printed but not linked: 45

  1. Ananyeva, 2006, The ratio of fungi and bacteria in the biomass of different types of soil determined by selective inhibition, Microbiology, 75, 702, 10.1134/S0026261706060130 · DOI
  2. Baath, 2003, Comparison of soil fungal/bacterial ratios in a pH gradient using physiological and PLFA-based techniques, Soil Biology & Biochemistry, 35, 955, 10.1016/S0038-0717(03)00154-8 · DOI · Paper page
  3. Bailey, 2003, Suppressing soil-borne diseases with residue management and organic amendments, Soil & Tillage Research, 72, 169, 10.1016/S0167-1987(03)00086-2 · DOI
  4. Baldrian, 2008, Wood-inhabiting ligninolytic basidiomycetes in soils: ecology and constraints for applicability in bioremediation, Fungal Ecology, 1, 4, 10.1016/j.funeco.2008.02.001 · DOI
  5. Ball, 1989, Degradation of lignin-related compounds by actinomycetes, Applied and Environmental Microbiology, 55, 1642, 10.1128/aem.55.6.1642-1644.1989 · DOI
  6. Bloomfield, 1967, Melanins and resistance of fungi to lysis, Journal of Bacteriology, 93, 1276, 10.1128/jb.93.4.1276-1280.1967 · DOI
  7. Butler, 1998, Destruction of fungal melanins by ligninases of Phanerochaete chrysosporium and other white rot fungi, International Journal of Plant Sciences, 159, 989, 10.1086/314093 · DOI
  8. Carling, 2002, Characterization of AG-13, a newly reported anastomosis group of Rhizoctonia solani, Phytopathology, 92, 893, 10.1094/PHYTO.2002.92.8.893 · DOI
  9. Chamberlain, 1999, In vitro and in vivo antagonism of pathogenic turf grass fungi by Streptomyces hygroscopicus strains YCED9 and WYE53, Journal of Industrial Microbiology & Biotechnology, 23, 641, 10.1038/sj.jim.2900671 · DOI
  10. Coley-Smith, 1971, Survival and germination of fungal sclerotia, Annual Review of Phytopathology, 9, 65, 10.1146/annurev.py.09.090171.000433 · DOI
  11. Daniel, 1994, Pyranose oxidase, a major source of H2O2 during wood degradation by Phanerochaete chrysosporium, Trametes versicolor, and Oudemansiella mucida, Applied and Environmental Microbiology, 60, 2524, 10.1128/aem.60.7.2524-2532.1994 · DOI
  12. de Boer, 2005, Living in a fungal world: impact of fungi on soil bacterial niche development, Fems Microbiology Reviews, 29, 795, 10.1016/j.femsre.2004.11.005 · DOI
  13. Debode, 2005, Lignin is involved in the reduction of Verticillium dahliae var. longisporum inoculum in soil by crop residue incorporation, Soil Biology & Biochemistry, 37, 301, 10.1016/j.soilbio.2004.08.001 · DOI
  14. Debode, 2007, Biosurfactants are involved in the biological control of Verticillium microsclerotia by Pseudomonas spp, Journal of Applied Microbiology, 103, 1184, 10.1111/j.1365-2672.2007.03348.x · DOI
  15. Denef, 2009, Microbial community composition and rhizodeposit-carbon assimilation in differently managed temperate grassland soils, Soil Biology & Biochemistry, 41, 144, 10.1016/j.soilbio.2008.10.008 · DOI
  16. Frostegard, 1996, The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil, Biology and Fertility of Soils, 22, 59, 10.1007/BF00384433 · DOI
  17. Gomez, 2003, Melanin and fungi, Current Opinion in Infectious Diseases, 16, 91, 10.1097/00001432-200304000-00005 · DOI
  18. Janvier, 2007, Soil health through soil disease suppression: which strategy from descriptors to indicators?, Soil Biology & Biochemistry, 39, 1, 10.1016/j.soilbio.2006.07.001 · DOI
  19. Jones, 2003, Use of Coniothyrium minitans transformed with the hygromycin B resistance gene to study survival and infection of Sclerotinia sclerotiorum sclerotia in soil, Mycological Research, 107, 267, 10.1017/S0953756203007457 · DOI
  20. Kroppenstedt, 1984, Analysis of fatty-acids and other lipids of actinomycetes and coryneform bacteria, Systematic and Applied Microbiology, 5, 273
  21. Lang, 1998, Production of ligninolytic enzymes by Pleurotus sp. and Dichomitus squalens in soil and lignocellulose substrate as influenced by soil microorganisms, Fems Microbiology Letters, 167, 239, 10.1111/j.1574-6968.1998.tb13234.x · DOI
  22. Litterick, 2004, The role of uncomposted materials, composts, manures, and compost extracts in reducing pest and disease incidence and severity in sustainable temperate agricultural and horticultural crop production – a review, Critical Reviews in Plant Sciences, 23, 453, 10.1080/07352680490886815 · DOI
  23. Manning, 1970, Method for production of sclerotia of Rhizoctonia solani, Phytopathology, 60, 179, 10.1094/Phyto-60-179 · DOI
  24. Mercer, 1996, Screening actinomycetes for extracellular peroxidase activity, Applied and Environmental Microbiology, 62, 2186, 10.1128/aem.62.6.2186-2190.1996 · DOI
  25. Okeke, 1996, Influence of environmental parameters on pentachlorophenol biotransformation in soil by Lentinula edodes and Phanerochaete chrysosporium, Applied Microbiology and Biotechnology, 45, 263, 10.1007/s002530050681 · DOI
  26. Pannecoucque, 2008, Characterization and pathogenicity of Rhizoctonia isolates associated with cauliflower in Belgium, Plant Pathology, 57, 737, 10.1111/j.1365-3059.2007.01823.x · DOI
  27. Rodriguez, 1996, Degradation of natural lignins and lignocellulosic substrates by soil-inhabiting fungi imperfecti, Fems Microbiology Ecology, 21, 213, 10.1111/j.1574-6941.1996.tb00348.x · DOI
  28. Rousk, 2009, Contrasting soil pH effects on fungal and bacterial growth suggest functional redundancy in carbon mineralization, Applied and Environmental Microbiology, 75, 1589, 10.1128/AEM.02775-08 · DOI
  29. Sabaratnam, 2002, Formulation of a Streptomyces biocontrol agent for the suppression of Rhizoctonia damping-off in tomato transplants, Biological Control, 23, 245, 10.1006/bcon.2001.1014 · DOI
  30. Shetty, 2000, Mechanism of broccoli-mediated Verticillium wilt reduction in cauliflower, Phytopathology, 90, 305, 10.1094/PHYTO.2000.90.3.305 · DOI
  31. Snajdr, 2006, Production of lignocellulose-degrading enzymes and changes in soil bacterial communities during the growth of Pleurotus ostreatus in soil with different carbon content, Folia Microbiologica, 51, 579, 10.1007/BF02931623 · DOI
  32. Soltani, 2002, Reduction of potato scab and Verticillium wilt with ammonium lignosulfonate soil amendment in four Ontario potato fields, Canadian Journal of Plant Pathology, 24, 332, 10.1080/07060660209507018 · DOI
  33. Stahl, 1996, Characterization and differentiation of filamentous fungi based on fatty acid composition, Applied and Environmental Microbiology, 62, 4136, 10.1128/aem.62.11.4136-4146.1996 · DOI
  34. Termorshuizen, 2006, Suppressiveness of 18 composts against 7 pathosystems: variability in pathogen response, Soil Biology & Biochemistry, 38, 2461, 10.1016/j.soilbio.2006.03.002 · DOI
  35. Tuitert, 1998, Suppression of Rhizoctonia solani in potting mixtures amended with compost made from organic household waste, Phytopathology, 88, 764, 10.1094/PHYTO.1998.88.8.764 · DOI
  36. Tuomela, 2000, Biodegradation of lignin in a compost environment: a review, Bioresource Technology, 72, 169, 10.1016/S0960-8524(99)00104-2 · DOI
  37. Van Beneden, 2009, Characterisation of fungal pathogens causing basal rot of letttuce in Belgian greenhouses, European Journal of Plant Pathology, 124, 9, 10.1007/s10658-008-9385-z · DOI
  38. van der Wal, 2006, Constraints on development of fungal biomass and decomposition processes during restoration of arable sandy soils, Soil Biology & Biochemistry, 38, 2890, 10.1016/j.soilbio.2006.04.046 · DOI
  39. Van Toor, 2005, Wood rotting fungi and pine mulches enhance parasitism of Ciborinia camelliae sclerotia in vitro, New Zealand Journal of Crop and Horticultural Science, 33, 389, 10.1080/01140671.2005.9514375 · DOI
  40. Vicuna, 1993, Ability of natural bacterial isolates to metabolize high and low-molecular-weight lignin-derived molecules, Journal of Biotechnology, 30, 9, 10.1016/0168-1656(93)90022-F · DOI
  41. Weller, 2002, Microbial populations responsible for specific soil suppressiveness to plant pathogens, Annual Review of Phytopathology, 40, 309, 10.1146/annurev.phyto.40.030402.110010 · DOI
  42. White, 2006, Necrotrophic mycoparasitism of Botrytis cinerea by cellulolytic and ligninocellulolytic Basidiomycetes, Canadian Journal of Microbiology, 52, 508, 10.1139/w05-141 · DOI
  43. Workneh, 1994, Microbial density, composition, and diversity in organically and conventionally managed rhizosphere soil in relation to suppression of corky root of tomatoes, Applied Soil Ecology, 1, 219, 10.1016/0929-1393(94)90013-2 · DOI
  44. Zelles, 1997, Phospholipid fatty acid profiles in selected members of soil microbial communities, Chemosphere, 35, 275, 10.1016/S0045-6535(97)00155-0 · DOI
  45. Zelles, 1999, Fatty acid patterns of phospholipids and lipopolysaccharides in the characterisation of microbial communities in soil: a review, Biology and Fertility of Soils, 29, 111, 10.1007/s003740050533 · DOI

Cited by

Sorted by citations

Metadata

Authors
Van Beneden, S., Roobroeck, D., França, S. C., De Neve, S., Boeckx, P., & Höfte, M.
Affiliations
Ghent University (BE)
Corresponding author
Höfte, Monica
ORCID
Venue
Soil Biology and Biochemistry
Publisher
Elsevier BV
Published
2010-08
Volume
42
Issue
8
Pages
1268-1274
ISSN
0038-0717 (ISSN-L)
DOI
10.1016/j.soilbio.2010.04.007
OpenAlex
W2041873466
Cited by
27
References
0
Citations by year
2025: 5 · 2023: 1 · 2021: 6 · 2020: 1 · 2019: 2 · 2017: 3 · 2016: 3 · 2013: 3 · 2012: 2
FWCI
2.14
Type
journal article
Language
en
Open access
closed
Licence
Locations
  • Soil Biology and Biochemistry (publishedVersion)
  • Ghent University Academic Bibliography (Ghent University) (submittedVersion)
Topics
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Disease Resistance and Genetics
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Disease Management Techniques
  • Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant-Microbe Interactions and Immunity
Keywords
soil amendment, soil microbial community structure, Gram-negative bacteria, actinomycetes, manganese peroxidase, lignin-degrading fungi, melanin degradation, plant disease suppression

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review