An Oct4-Centered Protein Interaction Network in Embryonic Stem Cells

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Items 101–200 of 542

1. Proteins that bind regulatory regions identified by histone modification chromatin immunoprecipitations and mass spectrometry
   Erik Engelen, Johannes H. Brandsma, Maaike J. Moen, Luca Signorile, Dick H. W. Dekkers, Jeroen Demmers, Christel E. M. Kockx, Zeliha Özgür, Wilfred F. J. van IJcken, Debbie L. C. van den Berg et al. · 2015 · Nature Communications
2. TFCP2/TFCP2L1/UBP1 transcription factors in cancer
   Grzegorz Kotarba, Ewa Krzywińska, Anna I. Grabowska, Agnieszka Taracha-Wiśniewska, Tomasz Wilanowski · 2018 · Cancer Letters
3. Ncoa3 functions as an essential Esrrb coactivator to sustain embryonic stem cell self-renewal and reprogramming
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4. Tex10 Coordinates Epigenetic Control of Super-Enhancer Activity in Pluripotency and Reprogramming
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5. RYBP Represses Endogenous Retroviruses and Preimplantation- and Germ Line-Specific Genes in Mouse Embryonic Stem Cells
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6. Polycomblike 2 facilitates the recruitment of PRC2 Polycomb group complexes to the inactive X chromosome and to target loci in embryonic stem cells
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7. On the role of Wnt/β-catenin signaling in stem cells
   Susanne Julia Kühl, Michael Kühl · 2012 · Biochimica et Biophysica Acta (BBA) - General Subjects
8. Genome-scale proteome quantification by DEEP SEQ mass spectrometry
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9. Sall4 controls differentiation of pluripotent cells independently of the Nucleosome Remodelling and Deacetylation (NuRD) complex
   Miller, Anzy, Ralser, Meryem, Kloet, Susan L., Loos, Remco, Nishinakamura, Ryuichi, Bertone, Paul, Vermeulen, Michiel, Hendrich, Brian · 2016 · Development
10. ETS-related Transcription Factors ETV4 and ETV5 Are Involved in Proliferation and Induction of Differentiation-associated Genes in Embryonic Stem (ES) Cells
    Tadayuki Akagi, Satu Kuure, Kousuke Uranishi, Hiroshi Koide, Frank D. Costantini, Takashi Yokota · 2015 · Journal of Biological Chemistry
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    Ralph Stadhouders, Alba Cico, Tharshana Stephen, Supat Thongjuea, Petros Kolovos, H. Irem Baymaz, Xiao Yu, Jeroen Demmers, Karel Bezstarosti, Alex Maas et al. · 2015 · Nature Communications
12. β-Catenin/POU5F1/SOX2 Transcription Factor Complex Mediates IGF-I Receptor Signaling and Predicts Poor Prognosis in Lung Adenocarcinoma
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13. Mediator complex interaction partners organize the transcriptional network that defines neural stem cells
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14. Zfp281 Functions as a Transcriptional Repressor for Pluripotency of Mouse Embryonic Stem Cells
    Miguel Fidalgo, P. Chandra Shekar, Yen-Sin Ang, Yuko Fujiwara, Stuart H. Orkin, Jianlong Wang · 2011 · Stem Cells
15. Esrrb, an estrogen‐related receptor involved in early development, pluripotency, and reprogramming
    Nicola Festuccia, Nick D. L. Owens, Pablo Navarro · 2017 · FEBS Letters
16. Endogenous fluctuations of OCT4 and SOX2 bias pluripotent cell fate decisions
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17. A complex of the ubiquitin ligase TRIM32 and the deubiquitinase USP7 balances the level of c-Myc ubiquitination and thereby determines neural stem cell fate specification
    Sarah Nicklas, Anna‐Lena Hillje, Satoshi Okawa, Ina‐Maria Rudolph, Franziska M. Collmann, Thea van Wuellen, Antonio del Sol, Jens Christian Schwamborn · 2018 · Cell Death and Differentiation
18. Dynamic lineage priming is driven via direct enhancer regulation by ERK
    William Baskerville Hamilton, Yaron Mosesson, Rita S. Monteiro, Kristina Bennet Emdal, Teresa E. Knudsen, Chiara Francavilla, Naama Barkai, Jesper Velgaard Olsen, Joshua M. Brickman · 2019 · Nature
19. YY1 Positively Regulates Transcription by Targeting Promoters and Super-Enhancers through the BAF Complex in Embryonic Stem Cells
    Jia Wang, Xingui Wu, Chao Wei, Xin Huang, Qian Ma, Xiaona Huang, Francesco Faiola, Diana Guallar, Miguel Fidalgo, Ting-Yuan Huang et al. · 2018 · Stem Cell Reports
20. Acetylated histone H3K56 interacts with Oct4 to promote mouse embryonic stem cell pluripotency
    Yuliang Tan, Yong Xue, Chunying Song, Michael R. Grunstein · 2013 · Proceedings of the National Academy of Sciences
21. The histone H2A deubiquitinase Usp16 regulates embryonic stem cell gene expression and lineage commitment
    Wei Yang, Yun Hwa Lee, Amanda E. Jones, Jessica L. Woolnough, Dewang Zhou, Qian Dai, Qiang Wu, Keith E. Giles, Tim M. Townes, Hengbin Wang · 2014 · Nature Communications
22. The mechanistic basis for chromatin regulation by pioneer transcription factors
    Iwafuchi‐Doi, Makiko · 2019 · WIREs Systems Biology and Medicine
23. Oct4 Is Required ∼E7.5 for Proliferation in the Primitive Streak
    Brian DeVeale, Irina Brokhman, Paria Mohseni, Tomas Babak, Charles Yoon, Anthony Lin, Kento Onishi, Alexey N. Tomilin, Larysa Pevny, Peter W. Zandstra et al. · 2013 · PLoS Genetics
24. Transcriptional enhancers and their communication with gene promoters
    Ray-Jones, Helen, Spivakov, Mikhail · 2021 · Cellular and Molecular Life Sciences
25. Grainyhead-like 2 (GRHL2) inhibits keratinocyte differentiation through epigenetic mechanism
    W Chen, Z Xiao Liu, Oh Je, K-H Shin, Reuben H. Kim, Meisheng Jiang, N-H Park, Mo Kang · 2012 · Cell Death and Disease
26. Dual Functions of T-Box 3 (Tbx3) in the Control of Self-renewal and Extraembryonic Endoderm Differentiation in Mouse Embryonic Stem Cells
    Lu, Rui, Yang, Acong, Jin, Ying · 2011 · Journal of Biological Chemistry
27. Decreased mitochondrial respiration in aneurysmal aortas of Fibulin-4 mutant mice is linked to PGC1A regulation
    Ingrid van der Pluijm, Joyce E. Burger, Paula M. van Heijningen, Arne S. IJpma, Nicole van Vliet, Chiara Milanese, Kees C. Schoonderwoerd, Willem Sluiter, Léa‐Jeanne Ringuette, Dirk H W Dekkers et al. · 2018 · Cardiovascular Research
28. Pluripotent Stem Cells: Origin, Maintenance and Induction
    M. de Miguel, Sherezade Fuentes‐Julian, Y. Alcaina · 2010 · Stem Cell Reviews and Reports
29. Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency
    Mor, Nofar, Rais, Yoach, Sheban, Daoud, Peles, Shani, Aguilera-Castrejon, Alejandro, Zviran, Asaf, Elinger, Dalia, Viukov, Sergey, Geula, Shay, Krupalnik, Vladislav et al. · 2018 · Cell Stem Cell
30. Transcription factor networks in trophoblast development
    Henrieta Papúchová, Paulina A. Latos · 2022 · Cellular and Molecular Life Sciences
31. Ctbp2 Modulates NuRD-Mediated Deacetylation of H3K27 and Facilitates PRC2-Mediated H3K27me3 in Active Embryonic Stem Cell Genes During Exit from Pluripotency
    Tae Wan Kim, Byung-Hee Kang, Hyonchol Jang, Sojung Kwak, Jihoon Shin, Hyunsoo Kim, Sang-Eun Lee, Soon-Min Lee, Jong‐Hyuk Lee, Jae-Hwan Kim et al. · 2015 · Stem Cells
32. Independent Mechanisms Target SMCHD1 to Trimethylated Histone H3 Lysine 9-Modified Chromatin and the Inactive X Chromosome
    Nicholas J. Brideau, Heather A. Coker, Anne-Valérie Gendrel, C. Alistair Siebert, Karel Bezstarosti, Jeroen Demmers, Raymond A. Poot, Tatyana B. Nesterova, Neil Brockdorff · 2015 · Molecular and Cellular Biology
33. Regulation of pluripotency in male germline stem cells by Dmrt1
    Seiji Takashima, Michiko Hirose, Narumi Ogonuki, Miki Ebisuya, Kimiko Inoue, Mito Kanatsu‐Shinohara, Takashi Sonam Tashi Tanaka, Eisuke Nishida, Atsuo Ogura, Takashi Shinohara · 2013 · Genes & Development
34. Cnot1, Cnot2, and Cnot3 Maintain Mouse and Human ESC Identity and Inhibit Extraembryonic Differentiation
    Xiaofeng Zheng, ‎Raluca Dumitru, Brad L. Lackford, Johannes Freudenberg, Ajeet Pratap Singh, Trevor Archer, Raja Jothi, Guang Hu · 2012 · Stem Cells
35. H3K4 Methyltransferase Set1a Is A Key Oct4 Coactivator Essential for Generation of Oct4 Positive Inner Cell Mass
    Lan Fang, Jun Zhang, Hui Zhang, Xiaoqin Yang, Xueling Jin, Ling Zhang, David G. Skalnik, Ying Jin, Yong Zhang, Xingxu Huang et al. · 2016 · Stem Cells
36. GATA family members as inducers for cellular reprogramming to pluripotency
    Jian Shu, Ke Zhang, Minjie Zhang, Anzhi Yao, Sida Shao, Fengxia Du, Caiyun Yang, Wenhan Chen, Chen Wu, Weifeng Yang et al. · 2015 · Cell Research
37. Nipbl Interacts with Zfp609 and the Integrator Complex to Regulate Cortical Neuron Migration
    Debbie L. C. van den Berg, Roberta Azzarelli, Koji Oishi, Ben Martynoga, Noelia Urbán, Dick H. W. Dekkers, Jeroen Demmers, François Guillemot · 2016 · Neuron
38. Loss of MAOA in epithelia inhibits adenocarcinoma development, cell proliferation and cancer stem cells in prostate
    Chun‐Peng Liao, Tzu‐Ping Lin, Pei‐Chuan Li, Lauren Geary, Kai Chen, Vijaya Pooja Vaikari, Boyang Jason Wu, Chi‐Hung Lin, Mitchell Eric Gross, Jean Chen Shih · 2018 · Oncogene
39. Metabolism in pluripotency: Both driver and passenger?
    Perrine Dahan, Vivian Lu, Robert Nguyen, Stephanie A.L. Kennedy, Michael A. Teitell · 2018 · Journal of Biological Chemistry
40. Phosphorylation of TFCP2L1 by CDK1 is required for stem cell pluripotency and bladder carcinogenesis
    Jinbeom Heo, Byeong‐Joo Noh, Seungun Lee, Hye‐Yeon Lee, YongHwan Kim, Jisun Lim, Hyein Ju, Hwan Yeul Yu, Chae‐Min Ryu, Peter CW Lee et al. · 2019 · EMBO Molecular Medicine
41. Alternative Splicing Produces Nanog Protein Variants with Different Capacities for Self-renewal and Pluripotency in Embryonic Stem Cells
    Satyabrata Das, Snehalata Jena, Dana N. Levasseur · 2011 · Journal of Biological Chemistry
42. Analysis of the SUMO2 Proteome during HSV-1 Infection
    Elizabeth Sloan, Michael H. Tatham, Marine Groslambert, Mandy Glaß, Anne Orr, Ronald T. Hay, Roger D. Everett · 2015 · PLoS Pathogens
43. Transcription-Factor-Dependent Control of Adult Hippocampal Neurogenesis
    Ruth Beckervordersandforth, Chun‐Li Zhang, Dieter Chichung Lie · 2015 · Cold Spring Harbor Perspectives in Biology
44. EWS/FLI1 Target Genes and Therapeutic Opportunities in Ewing Sarcoma
    Florencia Cidre‐Aranaz, Javier Alonso · 2015 · Frontiers in Oncology
45. The Lin28/let-7 Pathway Regulates the Mammalian Caudal Body Axis Elongation Program
    Daisy A. Robinton, Jérome Chal, Edroaldo Lummertz da Rocha, Areum Han, Alena V. Yermalovich, Masayuki Oginuma, Thorsten M. Schlaeger, Patricia Sousa, Antony Rodríguez, Achia Urbach et al. · 2019 · Developmental Cell
46. Hypoxic priming of mESCs accelerates vascular‐lineage differentiation through HIF1‐mediated inverse regulation of Oct4 and VEGF
    Sae‐Won Lee, Han-Kyul Jeong, Ji‐Young Lee, Jimin Yang, Eun Ju Lee, Su‐Yeon Kim, Seock‐Won Youn, Jaewon Lee, Woo Jean Kim, Kyu‐Won Kim et al. · 2012 · EMBO Molecular Medicine
47. A dynamic interplay of enhancer elements regulates Klf4 expression in naïve pluripotency
    Liangqi Xie, Sharon E. Torigoe, Jifang Xiao, Daniel H. Mai, Li Li, Fred P. Davis, Peng Dong, Hervé Marie-Nelly, Jonathan B. Grimm, Luke D. Lavis et al. · 2017 · Genes & Development
48. Oct1 Is a Switchable, Bipotential Stabilizer of Repressed and Inducible Transcriptional States
    Arvind Shakya, Jinsuk Kang, Jeffrey Chumley, Matthew A. Williams, Dean R Tantin · 2010 · Journal of Biological Chemistry
49. Master regulators in development: Views from the Drosophila retinal determination and mammalian pluripotency gene networks
    Trevor L. Davis, Ilaria Rebay · 2016 · Developmental Biology
50. Systematic repression of transcription factors reveals limited patterns of gene expression changes in ES cells
    Akira Nishiyama, Alexei A. Sharov, Yulan Piao, Misa Amano, Tomokazu Amano, Hien G. Hoang, Bernard Y.K. Binder, Richard Tapnio, Uwem C. Bassey, Justin N. Malinou et al. · 2013 · Scientific Reports
51. Global Oct4 target gene analysis reveals novel downstream PTEN and TNC genes required for drug-resistance and metastasis in lung cancer
    Yen-An Tang, Chi-Hsin Chen, H. Sunny Sun, Chun-Pei Cheng, Vincent S. M. Tseng, Han‐Shui Hsu, Wu‐Chou Su, Wu‐Wei Lai, Yi‐Ching Wang · 2015 · Nucleic Acids Research
52. Members of the NODE (Nanog and Oct4-associated deacetylase) complex and SOX-2 promote the initiation of a natural cellular reprogramming event in vivo
    Konstantinos Kagias, Arnaud Ahier, Nadine Fischer, Sophie Jarriault · 2012 · Proceedings of the National Academy of Sciences
53. Determination of Protein Interactome of Transcription Factor Sox2 in Embryonic Stem Cells Engineered for Inducible Expression of Four Reprogramming Factors
    Zhiguang Gao, Jesse L. Cox, Joshua M. Gilmore, Briana D. Ormsbee, Sunil K. Mallanna, Michael P. Washburn, Angie Rizzino · 2012 · Journal of Biological Chemistry
54. Sin3a-associated Hdac1 and Hdac2 are essential for hematopoietic stem cell homeostasis and contribute differentially to hematopoiesis
    Marinus R. Heideman, Cesare Lancini, Natalie Proost, Eva Yanover, Heinz Jacobs, J.-H. Dannenberg · 2014 · Haematologica
55. A BEN-domain-containing protein associates with heterochromatin and represses transcription
    Kizhakke Mattada Sathyan, Zhen Shen, Vidisha Tripathi, Kannanganattu V. Prasanth, Supriya G. Prasanth · 2011 · Journal of Cell Science
56. Regulation of Mouse Retroelement MuERV-L/MERVL Expression by REX1 and Epigenetic Control of Stem Cell Potency
    Jon Schoorlemmer, Raquel Pérez-Palacios, María Climent, Diana Guallar, Pedro Muniesa · 2014 · Frontiers in Oncology
57. Regulation of transcription by the MLL2 complex and MLL complex–associated AKAP95
    Hao Jiang, Xiangdong Lu, Miho Shimada, Yali Dou, Zhanyun Tang, Robert G. Roeder · 2013 · Nature Structural & Molecular Biology
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59. Elevated O-GlcNAc Levels Activate Epigenetically Repressed Genes and Delay Mouse ESC Differentiation Without Affecting Naïve to Primed Cell Transition
    Christopher M. Speakman, Tanja Domke, Wikrom Wongpaiboonwattana, Kelly Sanders, Manikhandan Mudaliar, Daan M. F. van Aalten, Geoffrey J. Barton, Marios P. Stavridis · 2014 · Stem Cells
60. Sox2 Uses Multiple Domains to Associate with Proteins Present in Sox2-Protein Complexes
    Jesse L. Cox, Sunil K. Mallanna, Xu Luo, Angie Rizzino · 2010 · PLoS ONE
61. O-GlcNAc transferase regulates transcriptional activity of human Oct4
    Sandii Constable, Jae‐Min Lim, Krithika Vaidyanathan, Lance Wells · 2017 · Glycobiology
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    Junlei Zhang, Gaoke Liu, Yan Ruan, Jiali Wang, Ke Zhao, Ying Wan, Bing Liu, Hongting Zheng, Tao Peng, Wei Wu et al. · 2014 · Nature Communications
63. Selective influence of Sox2 on POU transcription factor binding in embryonic and neural stem cells
    Tapan Kumar Mistri, Arun George Devasia, L.T. Chu, Wei Ping Ng, Florian Halbritter, Douglas Colby, Ben Martynoga, Simon R. Tomlinson, Ian Chambers, Paul Robson et al. · 2015 · EMBO Reports
64. Combinatorial Binding in Human and Mouse Embryonic Stem Cells Identifies Conserved Enhancers Active in Early Embryonic Development
    Jonathan Göke, Marc Jung, Sarah Behrens, Lukas Chávez, Sean O’Keeffe, Bernd Timmermann, Hans Lehrach, James Adjaye, Martin Vingron · 2011 · PLoS Computational Biology
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    Yi Li, David Stern, Lye Lin Lock, Jason Mills, Ben S. Ou, Marina Morrow, Xuankuo Xu, Sanchayita Ghose, Zheng Jian Li, Honggang Cui · 2019 · Acta Biomaterialia
66. SUMOylation Represses Nanog Expression via Modulating Transcription Factors Oct4 and Sox2
    Yongyan Wu, Zekun Guo, Haibo Wu, Xiaohai Wang, Lixia Yang, Xiaoyan Shi, Juan Du, Bo Tang, Wenzhong Li, Liping Yang et al. · 2012 · PLoS ONE
67. Stem cells and reprogramming: breaking the epigenetic barrier?
    Yen-Sin Ang, Alexandre Gaspar‐Maia, Ihor R. Lemischka, Emily Bernstein · 2011 · Trends in Pharmacological Sciences
68. An atlas of tissue-specific conserved coexpression for functional annotation and disease gene prediction
    Rosario Michael Piro, Ugo Ala, Ivan Molineris, Elena Grassi, Chiara Bracco, Gian Paolo Perego, Paolo Provero, Ferdinando Di Cunto · 2011 · European Journal of Human Genetics
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    Sarah Nicklas, Satoshi Okawa, Anna‐Lena Hillje, Laura González-Cano, Antonio del Sol, Jens Christian Schwamborn · 2015 · Nucleic Acids Research
70. Pluripotency Transcription Factor Oct4 Mediates Stepwise Nucleosome Demethylation and Depletion
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71. Explanatory Integration Challenges in Evolutionary Systems Biology
    Sara Green, Melinda Bonnie Fagan, Johannes Jaeger · 2014 · Biological Theory
72. Dissecting ensemble networks in EScell populations reveals micro-heterogeneity underlying pluripotency
    Jamie Trott, Katsuhiko Hayashi, M. Azim Surani, M. Madan Babu, Alfonso Martínez-Arias · 2012 · Molecular BioSystems
73. Fam60a defines a variant Sin3a‐Hdac complex in embryonic stem cells required for self‐renewal
    Gundula Streubel, Darren J. Fitzpatrick, Giorgio Oliviero, Andrea Scelfo, Bruce Moran, Sudipto Das, Nayla Munawar, Ariane Watson, Kieran J. Wynne, Gian Luca Negri et al. · 2017 · The EMBO Journal
74. Dynamic CpG methylation delineates subregions within super-enhancers selectively decommissioned at the exit from naive pluripotency
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75. CHIR99021 promotes self-renewal of mouse embryonic stem cells by modulation of protein-encoding gene and long intergenic non-coding RNA expression
    Yongyan Wu, Zhiying Ai, Kezhen Yao, Lixia Cao, Juan Du, Xiaoyan Shi, Zekun Guo, Yong Zhang · 2013 · Experimental Cell Research
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    Anton W. Neff, Michael W. King, Anthony Louis Mescher · 2011 · Developmental Dynamics
77. Putative circulating markers of the early and advanced stages of breast cancer identified by high-resolution label-free proteomics
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81. Genomic Characterization of the Mouse Ribosomal DNA Locus
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    Megan S. Hogan, David-Emlyn Parfitt, Cinthya J. Zepeda‐Mendoza, Michael M. Shen, David L. Spector · 2015 · Cell stem cell
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    Wensheng Zhang, Constantinos Chronis, Xi Xian Chen, Heyao Zhang, Rapolas Spalinskas, Mercedes Pardo, Liangliang Chen, Guangming Wu, Zhexin Zhu, Yong Yu et al. · 2019 · Cell stem cell
85. A critical perspective of the diverse roles of O-GlcNAc transferase in chromatin
    Maria Cristina Gambetta, Jürg Müller · 2015 · Chromosoma
86. Assignment of Protein Interactions from Affinity Purification/Mass Spectrometry Data
    Mercedes Pardo, Jyoti Sharma Choudhary · 2012 · Journal of Proteome Research
87. A distinct isoform of ZNF207 controls self-renewal and pluripotency of human embryonic stem cells
    Fang Fang, Ninuo Xia, Benjamin Angulo, Joseph Carey, Zackery Cady, Jens Durruthy-Durruthy, Theo Stoddard-Bennett, Vittorio Sebastiano, Renee A. Reijo Pera · 2018 · Nature Communications
88. The evolving biology of cell reprogramming
    I. Wilmut, G. Sullivan, I. Chambers · 2011 · Philosophical Transactions of the Royal Society B: Biological Sciences
89. Transcriptome Comparison of Human Neurons Generated Using Induced Pluripotent Stem Cells Derived from Dental Pulp and Skin Fibroblasts
    Jian Chen, Mingyan Lin, John J. Foxe, Erika Pedrosa, Anastasia Hrabovsky, Reed C. Carroll, Deyou Zheng, Herbert M. Lachman · 2013 · PLoS ONE
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    Park, Tea Soon, Huo, Jeffrey S., Peters, Ann, Talbot, C. Conover, Verma, Karan, Zimmerlin, Ludovic, Kaplan, Ian M., Zambidis, Elias T. · 2012 · PLoS ONE
91. Review: The transcriptional and signalling networks of mouse trophoblast stem cells
    Paulina A. Latos, Myriam Hemberger · 2013 · Placenta
92. Oct4 Interaction with Hmgb2 Regulates Akt Signaling and Pluripotency
    Pearl A. Campbell, Michael A. Rudnicki · 2013 · Stem Cells
93. Pluripotency and Nuclear Reprogramming
    Marion Déjosez, Thomas P. Zwaka · 2012 · Annual Review of Biochemistry
94. Activation of the Aryl Hydrocarbon Receptor Interferes with Early Embryonic Development
    Manolis Gialitakis, Mauro Tolaini, Ying Li, Mercedes Pardo, Lu Yu, Ana Luisa Toribio, Jyoti Sharma Choudhary, Kathy K. Niakan, Venizelos Papayannopoulos, Brigitta Stockinger · 2017 · Stem Cell Reports
95. Heterochromatin loosening by the Oct4 linker region facilitates Klf4 binding and iPSC reprogramming
    Keshi Chen, Qi Long, Guangsuo Xing, Tianyu Wang, Yi Wu, Linpeng Li, Juntao Qi, Yanshuang Zhou, Bochao Ma, Hans Robert Schöler et al. · 2019 · The EMBO Journal
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    Daogang Guan, Jiaofang Shao, Zhongying Zhao, Panwen Wang, Jing Qin, Youping Deng, Kenneth R. Boheler, Junwen Wang, Bin Yan · 2014 · Nucleic Acids Research
97. Dynamic 3D Chromatin Reorganization during Establishment and Maintenance of Pluripotency
    Bobbie Pelham‐Webb, Dylan Murphy, Effie Apostolou · 2020 · Stem Cell Reports
98. Lysine-specific demethylase 1-mediated demethylation of histone H3 lysine 9 contributes to interleukin 1β-induced microsomal prostaglandin E synthase 1 expression in human osteoarthritic chondrocytes
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99. Oct4 mediates Müller glia reprogramming and cell cycle exit during retina regeneration in zebrafish
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100. Pcgf6, a Polycomb Group Protein, Regulates Mesodermal Lineage Differentiation in Murine ESCs and Functions in iPS Reprogramming
     Daniela Zdzieblo, X. Li, Qiong Lin, Martin Zenke, Damir J. Illich, M. Becker, Albrecht M. Müller · 2014 · Stem Cells