Cited by 103Neurogenesis and neuroplasticity mechanismsDevelopmental Biology and Gene RegulationMicroRNA in disease regulation

let-7 miRNAs Can Act through Notch to Regulate Human Gliogenesis

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Patterson, M., Gaeta, X., Loo, K., Edwards, M., Smale, S., Cinkornpumin, J., Xie, Y., Listgarten, J. +4 more·2014·Stem Cell Reports

Abstract

It is clear that neural differentiation from human pluripotent stem cells generates cells that are developmentally immature. Here, we show that the let-7 plays a functional role in the developmental decision making of human neural progenitors, controlling whether these cells make neurons or glia. Through gain- and loss-of-function studies on both tissue and pluripotent derived cells, our data show that let-7 specifically regulates decision making in this context by regulation of a key chromatin-associated protein, HMGA2. Furthermore, we provide evidence that the let-7/HMGA2 circuit acts on HES5, a NOTCH effector and well-established node that regulates fate decisions in the nervous system. These data link the let-7 circuit to NOTCH signaling and suggest that this interaction serves to regulate human developmental progression.

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Crossref · 10.1016/j.stemcr.2014.08.015

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  • This iPS-NPC line is relatively homogenous by immunostaining.

    “and by immunostaining are relatively homogenous49”
  • This iPS-NPC line is highly similar to other iPS-NPCs and ES-NPCs derived under standard conditions (Pearson correlation 0.926-0.959).

    “Clustering and Pearson analysis49 demonstrate that this iPS-NPCs is highly similar to other iPS-NPCs and ES-NPCS derived under standard conditions (Pearson: 0.926–0.959)”

    From GDF10 is a signal for axonal sprouting and functional recovery after stroke (2015) · cites this paper as [49]

    The Cell Culture section (page unavailable) describes deriving neural progenitors from pluripotent stem-cell lines, but does not compare the citing paper’s iPS-NPC line with other iPS-NPCs or ES-NPCs. The Results section reports a Pearson comparison between let-7-treated PSC-NPCs and tissue-derived NPCs, not the claimed comparison. Searches for the 0.926–0.959 range and the iPS-NPC/ES-NPC clustering comparison found no supporting passage in our copy. (LLM, conf=0.77)

    Experimental — accuracy not yet measured

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References 44 · Cited by 103

Research works printed but not linked: 42

  1. Ayoubi T.A. Jansen E. Meulemans S.M. Van de Ven W.J. Regulation of HMGIC expression: an architectural transcription factor involved in growth control and development Oncogene 18 1999 5076 5087 10490844
  2. Balzer E. Heine C. Jiang Q. Lee V.M. Moss E.G. LIN28 alters cell fate succession and acts independently of the let-7 microRNA during neurogliogenesis in vitro Development 137 2010 891 900 20179095
  3. Bhatt D.M. Pandya-Jones A. Tong A.J. Barozzi I. Lissner M.M. Natoli G. Black D.L. Smale S.T. Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions Cell 150 2012 279 290 22817891 PMC3405548
  4. Chambers C.B. Peng Y. Nguyen H. Gaiano N. Fishell G. Nye J.S. Spatiotemporal selectivity of response to Notch1 signals in mammalian forebrain precursors Development 128 2001 689 702 11171394
  5. Chang C.J. Mitra K. Koya M. Velho M. Desprat R. Lenz J. Bouhassira E.E. Production of embryonic and fetal-like red blood cells from human induced pluripotent stem cells PLoS ONE 6 2011 e25761 22022444 PMC3192723
  6. Chenn A. A top-NOTCH way to make astrocytes Dev. Cell 16 2009 158 159 19217415
  7. Cimadamore F. Amador-Arjona A. Chen C. Huang C.T. Terskikh A.V. SOX2-LIN28/let-7 pathway regulates proliferation and neurogenesis in neural precursors Proc. Natl. Acad. Sci. USA 110 2013 E3017 E3026 23884650 PMC3740872
  8. Craig A. Ling Luo N. Beardsley D.J. Wingate-Pearse N. Walker D.W. Hohimer A.R. Back S.A. Quantitative analysis of perinatal rodent oligodendrocyte lineage progression and its correlation with human Exp. Neurol. 181 2003 231 240 12781996
  9. Dean J.M. Moravec M.D. Grafe M. Abend N. Ren J. Gong X. Volpe J.J. Jensen F.E. Hohimer A.R. Back S.A. Strain-specific differences in perinatal rodent oligodendrocyte lineage progression and its correlation with human Dev. Neurosci. 33 2011 251 260 21865655 PMC3225247
  10. Gattas G.J. Quade B.J. Nowak R.A. Morton C.C. HMGIC expression in human adult and fetal tissues and in uterine leiomyomata Genes Chromosomes Cancer 25 1999 316 322 10398424
  11. Graf R. Munschauer M. Mastrobuoni G. Mayr F. Heinemann U. Kempa S. Rajewsky N. Landthaler M. Identification of LIN28B-bound mRNAs reveals features of target recognition and regulation RNA Biol. 10 2013 1146 1159 23770886 PMC3849162
  12. Hagan J.P. Piskounova E. Gregory R.I. Lin28 recruits the TUTase Zcchc11 to inhibit let-7 maturation in mouse embryonic stem cells Nat. Struct. Mol. Biol. 16 2009 1021 1025 19713958 PMC2758923
  13. Heo I. Joo C. Cho J. Ha M. Han J. Kim V.N. Lin28 mediates the terminal uridylation of let-7 precursor MicroRNA Mol. Cell 32 2008 276 284 18951094
  14. Hirabayashi Y. Gotoh Y. Stage-dependent fate determination of neural precursor cells in mouse forebrain Neurosci. Res. 51 2005 331 336 15740796
  15. Hojo M. Ohtsuka T. Hashimoto N. Gradwohl G. Guillemot F. Kageyama R. Glial cell fate specification modulated by the bHLH gene Hes5 in mouse retina Development 127 2000 2515 2522 10821751
  16. Kageyama R. Ohtsuka T. The Notch-Hes pathway in mammalian neural development Cell Res. 9 1999 179 188 10520600
  17. Kageyama R. Ohtsuka T. Kobayashi T. Roles of Hes genes in neural development Dev. Growth Differ. 50 Suppl 1 2008 S97 S103 18430159
  18. Karumbayaram S. Novitch B.G. Patterson M. Umbach J.A. Richter L. Lindgren A. Conway A.E. Clark A.T. Goldman S.A. Plath K. Directed differentiation of human-induced pluripotent stem cells generates active motor neurons Stem Cells 27 2009 806 811 19350680 PMC2895909
  19. Kim V.N. Nam J.W. Genomics of microRNA Trends Genet. 22 2006 165 173 16446010
  20. Lee S.H. Cho S. Sun Kim M. Choi K. Cho J.Y. Gwak H.S. Kim Y.J. Yoo H. Lee S.H. Park J.B. Kim J.H. The ubiquitin ligase human TRIM71 regulates let-7 microRNA biogenesis via modulation of Lin28B protein Biochim. Biophys. Acta 1839 2014 374 386 24602972
  21. Lowry W.E. Blanpain C. Nowak J.A. Guasch G. Lewis L. Fuchs E. Defining the impact of beta-catenin/Tcf transactivation on epithelial stem cells Genes Dev. 19 2005 1596 1611 15961525 PMC1172065
  22. Lowry W.E. Richter L. Yachechko R. Pyle A.D. Tchieu J. Sridharan R. Clark A.T. Plath K. Generation of human induced pluripotent stem cells from dermal fibroblasts Proc. Natl. Acad. Sci. USA 105 2008 2883 2888 18287077 PMC2268554
  23. Mariani J. Simonini M.V. Palejev D. Tomasini L. Coppola G. Szekely A.M. Horvath T.L. Vaccarino F.M. Modeling human cortical development in vitro using induced pluripotent stem cells Proc. Natl. Acad. Sci. USA 109 2012 12770 12775 22761314 PMC3411972
  24. Monzen K. Ito Y. Naito A.T. Kasai H. Hiroi Y. Hayashi D. Shiojima I. Yamazaki T. Miyazono K. Asashima M. A crucial role of a high mobility group protein HMGA2 in cardiogenesis Nat. Cell Biol. 10 2008 567 574 18425117
  25. Nam Y. Chen C. Gregory R.I. Chou J.J. Sliz P. Molecular basis for interaction of let-7 microRNAs with Lin28 Cell 147 2011 1080 1091 22078496 PMC3277843
  26. Nishino J. Kim I. Chada K. Morrison S.J. Hmga2 promotes neural stem cell self-renewal in young but not old mice by reducing p16Ink4a and p19Arf Expression Cell 135 2008 227 239 18957199 PMC2582221
  27. Nishino J. Kim S. Zhu Y. Zhu H. Morrison S.J. A network of heterochronic genes including Imp1 regulates temporal changes in stem cell properties eLife 2 2013 e00924 24192035 PMC3817382
  28. Ohtsuka T. Ishibashi M. Gradwohl G. Nakanishi S. Guillemot F. Kageyama R. Hes1 and Hes5 as notch effectors in mammalian neuronal differentiation EMBO J. 18 1999 2196 2207 10205173 PMC1171303
  29. Ohtsuka T. Sakamoto M. Guillemot F. Kageyama R. Roles of the basic helix-loop-helix genes Hes1 and Hes5 in expansion of neural stem cells of the developing brain J. Biol. Chem. 276 2001 30467 30474 11399758
  30. Piskounova E. Viswanathan S.R. Janas M. LaPierre R.J. Daley G.Q. Sliz P. Gregory R.I. Determinants of microRNA processing inhibition by the developmentally regulated RNA-binding protein Lin28 J. Biol. Chem. 283 2008 21310 21314 18550544
  31. Piskounova E. Polytarchou C. Thornton J.E. LaPierre R.J. Pothoulakis C. Hagan J.P. Iliopoulos D. Gregory R.I. Lin28A and Lin28B inhibit let-7 microRNA biogenesis by distinct mechanisms Cell 147 2011 1066 1079 22118463 PMC3227872
  32. Sanosaka T. Namihira M. Asano H. Kohyama J. Aisaki K. Igarashi K. Kanno J. Nakashima K. Identification of genes that restrict astrocyte differentiation of midgestational neural precursor cells Neuroscience 155 2008 780 788 18640244
  33. Stacpoole S.R. Spitzer S. Bilican B. Compston A. Karadottir R. Chandran S. Franklin R.J. High yields of oligodendrocyte lineage cells from human embryonic stem cells at physiological oxygen tensions for evaluation of translational biology Stem Cell Reports 1 2013 437 450 24286031 PMC3841262
  34. Viswanathan S.R. Daley G.Q. Lin28: a microRNA regulator with a macro role Cell 140 2010 445 449 20178735
  35. Viswanathan S.R. Daley G.Q. Gregory R.I. Selective blockade of microRNA processing by Lin28 Science 320 2008 97 100 18292307 PMC3368499
  36. Wang D.J. Legesse-Miller A. Johnson E.L. Coller H.A. Regulation of the let-7a-3 promoter by NF-κB PLoS ONE 7 2012 e31240 22348059 PMC3278432
  37. Wang S. Bates J. Li X. Schanz S. Chandler-Militello D. Levine C. Maherali N. Studer L. Hochedlinger K. Windrem M. Goldman S.A. Human iPSC-derived oligodendrocyte progenitor cells can myelinate and rescue a mouse model of congenital hypomyelination Cell Stem Cell 12 2013 252 264 23395447 PMC3700553
  38. West J.A. Viswanathan S.R. Yabuuchi A. Cunniff K. Takeuchi A. Park I.H. Sero J.E. Zhu H. Perez-Atayde A. Frazier A.L. A role for Lin28 in primordial germ-cell development and germ-cell malignancy Nature 460 2009 909 913 19578360 PMC2729657
  39. Yu J. Induced pluripotent stem cell lines derived from human somatic cells Science 318 2007 1917 1920 18029452
  40. Yu K.R. Park S.B. Jung J.W. Seo M.S. Hong I.S. Kim H.S. Seo Y. Kang T.W. Lee J.Y. Kurtz A. Kang K.S. HMGA2 regulates the in vitro aging and proliferation of human umbilical cord blood-derived stromal cells through the mTOR/p70S6K signaling pathway Stem Cell Res. 10 2013 156 165 23276696
  41. Yuan J. Lin28b reprograms adult bone marrow hematopoietic progenitors to mediate fetal-like lymphopoiesis Science 335 2012 1195 1200 22345399 PMC3471381
  42. Zambidis E.T. Peault B. Park T.S. Bunz F. Civin C.I. Hematopoietic differentiation of human embryonic stem cells progresses through sequential hematoendothelial, primitive, and definitive stages resembling human yolk sac development Blood 106 2005 860 870 15831705 PMC1895146

Authors
Patterson, M., Gaeta, X., Loo, K., Edwards, M., Smale, S., Cinkornpumin, J., Xie, Y., Listgarten, J., Azghadi, S., Douglass, S. M., Pellegrini, M., & Lowry, W. E.
Affiliations
  • University of California, Los Angeles (US)
  • Microsoft (United States) (US)
Corresponding author
Lowry, W.E.
Venue
Stem Cell Reports
Publisher
Elsevier BV
Published
2014-11
Volume
3
Issue
5
Pages
758-773
ISSN
2213-6711 (ISSN-L)
OpenAlex
W2019974998
Cited by
103
References
44
Citations by year
2026: 2 · 2025: 8 · 2024: 5 · 2023: 5 · 2022: 5 · 2021: 12 · 2020: 10 · 2019: 11 · 2018: 11 · 2017: 15 · 2016: 11 · 2015: 7 · 2014: 1
FWCI
3.94
Type
journal article
Language
en
Open access
Locations
  • Stem Cell Reports (publishedVersion, cc-by-nc-nd)
  • PubMed Central (publishedVersion, cc-by-nc-nd)
  • PubMed (publishedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
  • eScholarship (California Digital Library) (submittedVersion)
Funders
  • National Human Genome Research Institute (T32HG002536)
  • National Cancer Institute (P30CA016042)
  • National Institute of General Medical Sciences (P01GM099134, F31GM113641, T32GM008042, P01GM99134)
Topics
  • Life Sciences › Neuroscience › Developmental Neuroscience › Neurogenesis and neuroplasticity mechanisms
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
Keywords
let-7 microRNA, Notch signaling, gliogenesis, HMGA2, Hes5, neuronal differentiation, human pluripotent stem cells, chromatin regulation
MeSH terms
Cell Differentiation, Cell Line, Humans, Immunohistochemistry, Nervous System, Neuroglia, Neurons, Oligodendroglia, Repressor Proteins, Signal Transduction, RNA-Binding Proteins, Gene Expression Regulation, Developmental, Reverse Transcriptase Polymerase Chain Reaction, HMGA2 Protein, RNA Interference, MicroRNAs, Pluripotent Stem Cells, Basic Helix-Loop-Helix Proteins, Basic Helix-Loop-Helix Transcription Factors, Receptors, Notch, Neurogenesis, Neural Stem Cells

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