GTP-Dependent K-Ras Dimerization
Muratcioglu, Serena, Chavan, Tanmay S., Freed, Benjamin C., Jang, Hyunbum, Khavrutskii, Lyuba, Freed, R. Natasha, Dyba, Marzena A., Stefanisko, Karen +6 more·2015·Structure
Cited by (205)
Items 101–200 of 205
- Small GTPase peripheral binding to membranes: molecular determinants and supramolecular organizationFrançois Peurois, Gérald Peyroche, Jacqueline Cherfils · 2018 · Biochemical Society Transactions
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- Understand KRAS and the Quest for Anti-Cancer DrugsChang Woo Han, Mi Suk Jeong, Se Bok Jang · 2021 · Cells
- Exploring CRD mobility during RAS/RAF engagement at the membraneKien Nguyen, César A. López, Chris Neale, Que N. Van, Timothy S. Carpenter, Francesco Di Natale, Timothy S. Travers, Timothy H. Tran, Albert H. Chan, Harsh Bhatia et al. · 2022 · Biophysical Journal
- Computer-Aided Drug Design Boosts RAS Inhibitor DiscoveryGe Wang, Yuhao Bai, Jiarui Cui, Zirui Zong, Yuan Gao, Zhen Zheng · 2022 · Molecules
- Influence of isoform-specific Ras lipidation motifs on protein partitioning and dynamics in model membrane systems of various complexityNelli Erwin, Satyajit Patra, Mridula Dwivedi, Katrin Weise, Roland Winter · 2016 · Biological Chemistry
- Oncogenic KRas mobility in the membrane and signaling responseRuth Nussinov, Chung‐Jung Tsai, Hyunbum Jang · 2018 · Seminars in Cancer Biology
- Common mechanisms of catalysis in small and heterotrimeric GTPases and their respective GAPsKlaus Bernhard Gerwert, Daniel Mann, Carsten Kötting · 2017 · Biological Chemistry
- Quantitative comparison between sub-millisecond time resolution single-molecule FRET measurements and 10-second molecular simulations of a biosensor proteinDylan J. Girodat, Avik Kumar Pati, Daniel S. Terry, Scott C. Blanchard, Karissa Y. Sanbonmatsu · 2020 · PLoS Computational Biology
- Structural insights into Ras regulation by SIN1Yuyuan Zheng, Lei Ding, Xianhui Meng, Meg Potter, Alison L. Kearney, Jie Zhang, Jie Sun, David Ernest James, Guang Yang, Chun Zhou · 2022 · Proceedings of the National Academy of Sciences
- How Anionic Lipids Affect Spatiotemporal Properties of KRAS4B on Model Membranes.Van A. Ngo, Sumantra Sarkar, Chris Neale, A. Garcia · 2020 · Journal of Physical Chemistry B
- Localization dynamics of endogenous fluorescently labeled RAF1 in EGF-stimulated cellsSachin Surve, Paul J. Myers, Samantha A. Clayton, Simon C. Watkins, Matthew J. Lazzara, Alexander D. Sorkin · 2018 · Molecular Biology of the Cell
- KRAS Binders Hidden in NatureAndreas Bergner, Xiaoling F. Cockcroft, Gerhard W. Fischer, Andreas Gollner, Wolfgang Hela, Roland Kousek, Andreas Mantoulidis, Laetitia J. Martin, Moriz Mayer, Barbara Müllauer et al. · 2019 · Chemistry - A European Journal
- Analysis of RAS protein interactions in living cells reveals a mechanism for pan-RAS depletion by membrane-targeted RAS bindersYao-Cheng Li, Nikki K. Lytle, Seth T. Gammon, Luke Wang, Tikvah K. Hayes, Margie Nicole Sutton, Robert C. Bast, Channing J. Der, David R Piwnica-Worms, Frank P. McCormick et al. · 2020 · Proceedings of the National Academy of Sciences
- RAS Nanoclusters Selectively Sort Distinct Lipid Headgroups and Acyl ChainsYong Zhou, Alemayehu Abebe Gorfe, John F. Hancock · 2021 · Frontiers in Molecular Biosciences
- Organization of Farnesylated, Carboxymethylated KRAS4B on MembranesEric Barklis, Andrew G. Stephen, August O. Staubus, Robin Lid Barklis, Ayna Alfadhli · 2019 · Journal of Molecular Biology
- Calmodulin and IQGAP1 activation of PI3Kα and Akt in KRAS, HRAS and NRAS-driven cancersRuth Nussinov, Mingzhen Zhang, Chung‐Jung Tsai, Hyunbum Jang · 2017 · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
- Uncovering the Structural Basis of a New Twist in Protein UbiquitinationKedar Puvar, Zhao‐Qing Luo, Chittaranjan Das · 2018 · Trends in Biochemical Sciences
- Independent and core pathways in oncogenic KRAS signalingRuth Nussinov, Chung‐Jung Tsai, Hyunbum Jang · 2016 · Expert Review of Proteomics
- Hetero-oligomerization of Rho and Ras GTPases Connects GPCR Activation to mTORC2-AKT SignalingHiroshi Senoo, May Wai, Hideaki T. Matsubayashi, Hiromi Sesaki, Miho Iijima · 2020 · Cell Reports
- New insights into RAS biology reinvigorate interest in mathematical modeling of RAS signalingKeesha E. Erickson, Oleksii S. Rukhlenko, Richard G. Posner, William S. Hlavacek, Boris Ν. Kholodenko · 2018 · Seminars in Cancer Biology
- Binding Specificities of Nanobody•Membrane Protein Complexes Obtained from Chemical Cross-Linking and High-Mass MALDI Mass SpectrometryMartin Köhler, Christoph Neff, Camilo Pérez, Cyrill Brunner, Els Pardon, Jan Steyaert, Gisbert Schneider, Kaspar P. Locher, Renato Zenobi · 2018 · Analytical Chemistry
- Dynamic Protein Allosteric Regulation and DiseaseNussinov, Ruth, Tsai, Chung-Jung, Jang, Hyunbum · 2019 · Advances in Experimental Medicine and Biology
- Natural Products Attenuating Biosynthesis, Processing, and Activity of Ras Oncoproteins: State of the Art and Future PerspectivesRenata Tisi, Vadim Gaponenko, Marco Vanoni, Elena Sacco · 2020 · Biomolecules
- Seeing is believing: Ras dimers observed in live cellsMark R. Philips, Channing J. Der · 2015 · Proceedings of the National Academy of Sciences
- The Hypervariable Region of K-Ras4B Governs Molecular Recognition and FunctionHazem Abdelkarim, Avik Banerjee, Patrick K. Grudzien, Nicholas Leschinsky, Mahmoud Abushaer, Vadim Gaponenko · 2019 · International Journal of Molecular Sciences
- Oncogenic K-Ras4B Dimerization Enhances Downstream Mitogen-activated Protein Kinase SignalingSerena Muratcioğlu, Cihan Aydın, Ezgi Odabasi, E. Sıla Özdemir, Elif Nur Firat‐Karalar, Hyunbum Jang, Chung‐Jung Tsai, Ruth Nussinov, İbrahim Halil Kavaklı, Attila Gürsoy et al. · 2020 · Journal of Molecular Biology
- The Self‐Association of the KRAS4b Protein is Altered by Lipid‐Bilayer Composition and ElectrostaticsKi‐Young Lee, Mitsuhiko Ikura, Christopher B. Marshall · 2023 · Angewandte Chemie International Edition
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- RAS Dimers: The Novice Couple at the RAS-ERK Pathway BallAna Herrero, Piero Crespo · 2021 · Genes
- Mutations in the α4-α5 allosteric lobe of RAS do not significantly impair RAS signaling or self-associationMichael Whaby, Lauren Wallon, Megan Mazzei, Imran Khan, Kai Wen Teng, Shohei Koide, John P. O’Bryan · 2022 · Journal of Biological Chemistry
- Direct Observation of Membrane-Associated H-Ras in the Native Cellular Environment by In-Cell 19F-NMR SpectroscopyMasaomi Ikari, Hiromasa Yagi, Takuma Kasai, Kohsuke Inomata, Masahiro Ito, Kae Higuchi, Natsuko Matsuda, Yutaka Ito, T. Kigawa · 2023 · JACS Au
- Conditional Cooperativity in RAS Assembly Pathways on Nanodiscs and Altered GTPase CyclingSoo‐Yeon Lee, Ki‐Young Lee · 2024 · Angewandte Chemie International Edition
- Nucleotide-Specific Autoinhibition of Full-Length K-Ras4B Identified by Extensive Conformational SamplingBálint Dudás, Franci Merzel, Hyunbum Jang, Ruth Nussinov, David Pérahia, Erika Balog · 2020 · Frontiers in Molecular Biosciences
- Increased mutant KRAS gene dosage drives pancreatic cancer progression: evidence for wild-type KRAS as a tumor suppressor?Oliver A. Kent · 2018 · HepatoBiliary Surgery and Nutrition
- K-Ras at Anionic Membranes: Orientation, Orientation…Orientation. Recent Simulations and ExperimentsZhenlu Li, Shufen Cao, Matthias Buck · 2016 · Biophysical Journal
- Two Distinct Structures of Membrane‐Associated Homodimers of GTP‐ and GDP‐Bound KRAS4B Revealed by Paramagnetic Relaxation EnhancementKi‐Young Lee, Zhenhao Fang, Masahiro Enomoto, Geneviève M. C. Gasmi-Seabrook, Le Zheng, Shohei Koide, Mitsuhiko Ikura, Christopher B. Marshall · 2020 · Angewandte Chemie
- Targeting Ras with protein engineeringAtílio Tomazini, Julia M. Shifman · 2023 · Oncotarget
- Millisecond molecular dynamics simulations of KRas-dimer formation and interfacesVan A. Ngo, Angel E. Garcı́a · 2022 · Biophysical Journal
- Capturing RAS oligomerization on a membraneSangho D. Yun, Elena Scott, Jing‐Yuan Chang, Hanieh Bahramimoghaddam, Michael Lynn, Carter Lantz, David H. Russell, Arthur D. Laganowsky · 2024 · Proceedings of the National Academy of Sciences
- Interface analysis of small GTP binding protein complexes suggests preferred membrane orientationsIngrid R. Vetter · 2016 · Biological Chemistry
- Arl2-Mediated Allosteric Release of Farnesylated KRas4B from Shuttling Factor PDEδE. Sıla Özdemir, Hyunbum Jang, Attila Gürsoy, Özlem Keskin, Ruth Nussinov · 2018 · The Journal of Physical Chemistry B
- Stability Analysis of a Bulk–Surface Reaction Model for Membrane Protein ClusteringLucas Martins Stolerman, Michael Getz, Stefan G. Llewellyn Smith, Michael Holst, Padmini Rangamani · 2020 · Bulletin of Mathematical Biology
- Self-assemblies of Rab- and Arf-family small GTPases on lipid bilayers in membrane tetheringJoji Mima · 2021 · Biophysical Reviews
- Ras Multimers on the Membrane: Many Ways for a Heart-to-Heart ConversationE. Sıla Özdemir, Anna Magdalena Koester, Xiaolin Nan · 2022 · Genes
- Identification of Radil as a Ras binding partner and putative activatorByeong Hyeok Choi, Ziyue Kou, Tania Marlyn Colon, Chih‐Hong Chen, Yuan Chen, Wei Hao Dai · 2021 · Journal of Biological Chemistry
- Nanoscopic Spatial Association between Ras and Phosphatidylserine on the Cell Membrane Studied with Multicolor Super Resolution MicroscopyAnna Magdalena Koester, Kai Xiong Tao, Malwina Szczepaniak, Matthew J. Rames, Xiaolin Nan · 2022 · Biomolecules
- Membrane-bound KRAS approximates an entropic ensemble of configurationsFrank Heinrich, Que N. Van, Frantz Louis Jean-Francois, Andrew G. Stephen, Mathias Lösche · 2021 · Biophysical Journal
- One‐Pot N2C/C2C/N2N Ligation To Trap Weak Protein–Protein InteractionsLei Zhao, Christiane Ehrt, Oliver Koch, Yao‐Wen Wu · 2016 · Angewandte Chemie International Edition
- An Application of pET SUMO Protein Expression System in Escherichia coli: Cloning, Expression, Purification, and Characterisation of Native Kras4BG12V OncoproteinMichelle Siying Tan, Yuan Han Teh, Kok Lian Ho, Johnson Stanslas · 2019 · The Protein Journal
- Membrane Composition and Raf[CRD]-Membrane Attachment Are Driving Forces for K-Ras4B Dimer StabilityIoannis Andreadelis, Sofia Kiriakidi, Christos Lamprakis, Anastasia Theodoropoulou, Stefan Doerr, Alexios Chatzigoulas, John I. Manchester, Camilo Velez‐Vega, José S. Duca, Zoe Cournia · 2022 · The Journal of Physical Chemistry B
- Membrane-Driven Dimerization of the Peripheral Membrane Protein KRAS: Implications for Downstream SignalingKi‐Young Lee · 2024 · International Journal of Molecular Sciences
- Presence or Absence of Ras Dimerization Shows Distinct Kinetic Signature in Ras-Raf InteractionSumantra Sarkar, Angel E. Garcı́a · 2020 · Biophysical Journal
- Brother’s Keeper: Wild-Type Mutant K-Ras Dimers Limit OncogenesisYi-Jang Lin, Kevin M. Haigis · 2018 · Cell
- Crystal structure of NRAS Q61K with a ligand-induced pocket near switch IITeklab Gebregiworgis, Jonathan Yui-Lai Chan, D.A. Kuntz, Gilbert G. Privé, Christopher B. Marshall, Mitsuhiko Ikura · 2024 · European Journal of Cell Biology
- Experimental variables determine the outcome of RAS-RAS interactionsZhiwei Zhou, Tra-Ly Nguyen, Xing-Xiao Li, Christel Poujol, Ewa Berlinska, Sandra Vietti Michelina, Jonas N. Kapp, Andreas Plückthun, Monte M. Winslow, Chiara Ambrogio et al. · 2024 · Journal of Biological Chemistry
- Activation of Ras by Post-Translational ModificationsShengyan Xiang, Wenlong Bai, Gerold Bepler, Xuemei Zhang · 2016 · Elsevier eBooks
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- Discoveries in the redox regulation of KRASMaximilian Kramer‐Drauberg, Chiara Ambrogio · 2020 · The International Journal of Biochemistry & Cell Biology
- Structural and functional analyses of a germline KRAS T50I mutation provide insights into Raf activationPanyu Chen, Benjamin J. Huang, Max Harris, Christopher D. Boone, Weijie Wang, Heidi Carias, Brian Mesiona, Daniela Mavrici, Amanda C. Kohler, Gideon E. Bollag et al. · 2023 · JCI Insight
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- Retraction2019 · BioFactors · Retracted
- Membrane Composition and Raf[CRD]-Membrane Attachment Are Driving Forces for K-Ras4B Dimer StabilityZoe Cournia, Ioannis Andreadelis, Sofia Kiriakidi, Christos Lamprakis, Anastasia Theodoropoulou, Stefan Doerr, Alexios Chatzigoulas, John I. Manchester, Camilo Velez‐Vega, José S. Duca · 2021
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- Elucidating Structural Details of Ras-Effector InteractionsSerena Muratcioğlu, Saliha Ece Acuner · 2019 · International Journal of Advances in Engineering and Pure Sciences
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- Membrane Composition and Raf[CRD]-Membrane Attachment Are Driving Forces for K-Ras4B Dimer StabilityZoe Cournia, Ioannis Andreadelis, Sofia Kiriakidi, Christos Lamprakis, Anastasia Theodoropoulou, Stefan Doerr, Alexios Chatzigoulas, John I. Manchester, Camilo Velez‐Vega, José S. Duca · 2021 · ChemRxiv
- The Ras Dimer StructureTill Rudack, Christian Teuber, Marvin Scherlo, Jörn Güldenhaupt, Jonas Schartner, Mathias Lübben, Johann P. Klare, Klaus Bernhard Gerwert, Carsten Kötting · 2021 · ChemRxiv
- The structural basis of allosteric communication networks of Ras GTPases and their oncogenic mutantsAlicia Yvette Volmar · 2020
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- Conditional Cooperativity in RAS Assembly Pathways on Nanodiscs and Altered GTPase CyclingSoo‐Yeon Lee, Ki‐Young Lee · 2024 · Angewandte Chemie