Automated image-based tracking and its application in ecology
Dell, Anthony I., Bender, John A., Branson, Kristin, Couzin, Iain D., de Polavieja, Gonzalo G., Noldus, Lucas P.J.J., Pérez-Escudero, Alfonso, Perona, Pietro +3 more·2014·Trends in Ecology & Evolution
Cited by (494)
Items 401–494 of 494
- Sizing mudsnails: Applying superpixels to scale growth detection under ocean warmingLiam MacNeil, Léa J. Joly, Maysa Ito, Anna Steinmann, Knut Mehler, Marco Scotti · 2024 · Methods in Ecology and Evolution
- The effect of acute social isolation on neural molecular responses in components of the social decision-making networkPatricia Castro Lopes, Madeleine Chang, Faith Holloway, Biola Fatusin, Sachin Patel, Chandler Siemonsma, Morgan Kindel · 2024 · BMC Genomics
- Models of Animal Behavior as Active Particle Systems with Nonreciprocal InteractionsAmir Haluts, Dan Gorbonos, Nir S. Gov · 2024 · Modeling and simulation in science, engineering & technology
- Counting Large Flocks of Birds Using Videos Acquired with Hand-Held DevicesAmanda Dash, Alexandra Branzan Albu · 2017 · Lecture notes in computer science
- Deep Distance Transform to Segment Visually Indistinguishable Merged ObjectsSören Klemm, Xiaoyi Jiang, Benjamin Risse · 2019 · Lecture notes in computer science
- Research on Key Feature Extraction and Position Accurate Tracking Based on Computer Vision ImageYan Sun · 2019 · Journal of Physics Conference Series
- High-speed CAMShift Tracking of Insect on GPUZiqiang Xu, Yuman Nie, Pingguo Cao, Quanjun Song · 2018 · IEEE International Conference on Information and Automation (ICIA)
- Size and shape of tracked Brownian bridgesAbdulrahman Alsolami, James Burridge, Michał Gnacik · 2020 · Journal of Physics A Mathematical and Theoretical
- Research on Application of Image Recognition and Tracking Technology Based on Moving ObjectsLin Lin · 2020 · International Conference on Smart Grid and Electrical Automation (ICSGEA)
- Using remote camera traps to assess mammal and bird assemblages across a complex environmental landscapeC. Cloyed, L. Cappelli, David A. Tilson, J. A. Crawford, A. Dell · 2017 · bioRxiv
- Tracking all members of a honey bee colony over their lifetimeFranziska Boenisch, Benjamin Rosemann, Benjamin Wild, Fernando Wario, David M Dormagen, Tim Landgraf · 2018 · arXiv (Cornell University)
- Calibration-free 3D reconstruction of firefly trajectories from 360-degree camerasRaphaël Sarfati, Orit Peleg · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Postural analysis reveals persistent vigilance in paper wasps after conspecific challengeAndrew Wesley Legan, Caleb C. Vogt, Michael J. Sheehan · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Integrating trait-based movement into mechanistic predictions of thermal performanceJördis F. Terlau, Ulrich Brose, Ana Carolina Antunes, Emilio Berti, Thomas Boy, Benoît Gauzens, Samraat S. Pawar, Malin L. Pinsky, Remo Ryser, Myriam R. Hirt · 2022 · Research Square
- Shortwave infrared (SWIR) fluorescence imaging of peripheral organs in awake and freely moving miceBernardo Assein Arús, Emily D. Cosco, Joycelyn Yiu, Ilaria Balba, Thomas S. Bischof, Ellen M. Sletten, Oliver T. Bruns† · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Evaluating, Implementing, and Applying Methods for Analysing Animal Biotelemetry DataJohannes Signer · 2016
- Nocturnal Homing in the Amblypygid Phrynus MarginemaculatusJacob M. Graving · 2015 · OhioLink ETD Center (Ohio Library and Information Network)
- Incremental Environmental Monitoring for Revealing the Ecology of Endangered FishYoshinari SHIRAI, Yasue Kishino, Shin Mizutani, Yutaka Yanagisawa, Takayuki Suyama, Takuma Otsuka, Tadao Kitagawa, Futoshi Naya · 2018 · IEICE Transactions on Communications
- Dolphins in Space: Quantifying the Relative Positions of Bottlenose Dolphins (Tursiops truncatus)Megan S McGrath · 2019 · CUNY Academic Works (City University of New York)
- Steady-State Analysis of Multi-agent Collective BehaviorHui Wei, Mingxin Shen, Xuebo Chen · 2019 · Advances in intelligent systems and computing
- Robust tracking and behavioral modeling of movements of biological collectives from ordinary video recordingsHiroki Sayama, Farnaz Zamani Esfahlani, Ali Reza Jazayeri, J. Scott Turner · 2017 · IEEE Symposium Series on Computational Intelligence (SSCI)
- Understanding mammals, hands-onAndrea Ravignani · 2019 · Journal of Mammalogy
- Detecting Unknown Behaviors by Pre-defined Behaviours: An Bayesian Non-parametric ApproachJin Watanabe, Takatomi Kubo, Fan Yang, Kazushi Ikeda · 2019 · arXiv (Cornell University)
- Quantification Analysis of Behavioral Changes after Sciatic Nerve Ligation in RatsPanyawut Sri-iesaranusorn, Saeka Shimochi, Naoki Ono, Emrah Yatkin, Hidehiro Iida, Kazushi Ikeda, Junichiro Yoshimoto · 2020
- Peer Review #1 of "scAnt—an open-source platform for the creation of 3D models of arthropods (and other small objects) (v0.1)"2021 · PeerJ
- Peer Review #3 of "scAnt—an open-source platform for the creation of 3D models of arthropods (and other small objects) (v0.1)"2021 · PeerJ
- Peer Review #2 of "scAnt—an open-source platform for the creation of 3D models of arthropods (and other small objects) (v0.1)"2021 · PeerJ
- Food web stability and connectance predicted from body-size constraints on trophic topology, self-regulation, and total consumptionTianyun Lin, Daniel J. Wieczynski, Van M. Savage · 2022 · Research Square
- Tracking and analysis of movement at different scalesDimitra G. Georgopoulou · 2020
- Peer Review #3 of "Measuring inter-individual differences in behavioural types of gilthead seabreams in the laboratory using deep learning (v0.2)"2022 · PeerJ
- Peer Review #2 of "Measuring inter-individual differences in behavioural types of gilthead seabreams in the laboratory using deep learning (v0.1)"2022 · PeerJ
- Peer Review #2 of "Measuring inter-individual differences in behavioural types of gilthead seabreams in the laboratory using deep learning (v0.2)"2022 · PeerJ
- Peer Review #1 of "Measuring inter-individual differences in behavioural types of gilthead seabreams in the laboratory using deep learning (v0.1)"2022 · PeerJ
- Peer Review #3 of "Measuring inter-individual differences in behavioural types of gilthead seabreams in the laboratory using deep learning (v0.1)"2022 · PeerJ
- Peer Review #1 of "Measuring inter-individual differences in behavioural types of gilthead seabreams in the laboratory using deep learning (v0.2)"2022 · PeerJ
- Works CitedSebastian Vehlken · 2019 · Amsterdam University Press eBooks
- Análisis de recurrencia en la actividad locomotora en cochinillas en función del nivel de humedadJorge A. Ruiz, Cristina G. Guerrero Sánchez · 2022 · Revista de psicología
- A novel method for investigating fish social behaviour in the fieldMolly A. Clark, Christos C. Ioannou · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Langue et science, langage et penséeGuy Theraulaz A · 2020 · Odile Jacob eBooks
- Toward Real-Time Animal Tracking with Integrated Stimulus Control for Automated Conditioning in Aquatic Eco-NeurotoxicologyYutao Bai, Jason Henry, Eva Cheng, Stuart William Perry, David Mawdsley, Bob B. M. Wong, Jan Kaslin, Donald Włodkowic · 2023 · Environmental Science & Technology
- Characterizing Pairwise U-Turn Behavior in Fish: A Data-Driven AnalysisTao Yuan, Yuchen Zhou, Zhicheng Zheng, Xiaokang Lei, Xingguang Peng · 2023 · Entropy
- Predicting thresholds for population replacement gene drivesAnna Janzen, Ratnasri Pothula, Adam Sychla, Nathan R. Feltman, Michael J. Smanski · 2024 · BMC Biology
- Focusing on Dynamics: When an Exception Becomes a RuleAlfredo Vicente Peretti, Lucía S. Calbacho-Rosa, Paola A. Olivero, Mariela A. Oviedo‐Diego, David E. Vrech · 2024 · Springer eBooks
- Voronoi diagrams and Delaunay triangulation for modelling animal territorial behaviourRhainer Guillermo Nascimento Ferreira, Alexander E. Filippov, Alexander E. Kovalev, Stanislav N. Gorb · 2024 · Ecology and Evolution
- Unsupervised multi-animal tracking for quantitative ethologyYixin Li, Xinyang Li, Qi Zhang, Yuanlong Zhang, Jiaqi Fan, Zhi Lü, Ziwei Li, Jiamin Wu, Qionghai Dai · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Using supervised machine learning to quantify cleaning behaviourRaúl Oliveira, Nuno C. Garcia, José Ricardo Paula · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- The Synergy of Artificial Intelligence and Animal CommunicationArun Agrawal, Anuja Manoj Chavan, Swati Nilesh Pawar, Ashvini Arvind Todkar, Deepak Gupta, Deepak Sudhakar Dharrao, Rakhi Arora, Rajeev Kumar Singh · 2025 · Advances in computational intelligence and robotics book series
- AnimalAI: An Open-Source Web Platform for Automated Animal Activity Index Calculation Using Interactive Deep Learning SegmentationMahtab Saeidifar, Guoming Li, Lakshmish Macheeri Ramaswamy, Chongxiao Chen, Ehsan Asali · 2025 · Animals
- Thermotaxis behavior of Drosophila melanogaster : A quantitative analysis of sensory-motor integration and heat avoidanceZeinab Moradi, Sara Jahedazad, Ehsan Hosseinian, Tayebeh Minaei, Ali Sadighi · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- A centralised multi‐unit recording system for automated, off‐grid animal observation and environmental monitoringMarçal Pou‐Rossell, Daniel Sol, Jolle Wolter Jolles · 2025 · Methods in Ecology and Evolution
- Long-term and low-concentration inhalation toxicity of toluene in Drosophila melanogaster based on a computer vision methodXiaoying Li, Chunhui Li, Xinran Zeng, Zhenhai Li · 2025 · Indoor and Built Environment
- New methods and technologies to record sheep behaviorsMeng-Hua Li, Hosein Salehian-Dehkordi · 2025 · Elsevier eBooks
- vassi – verifiable, automated scoring of social interactions in animal groupsPaul Nührenberg, Aneesh P. H. Bose, Alex L. Jordan · 2025 · eLife
- vassi – verifiable, automated scoring of social interactions in animal groupsPaul Nührenberg, Aneesh P. H. Bose, Alex L. Jordan · 2025 · eLife
- An implementation for the video processing of Barnes maze experiments in computational biophysicsVanessa Ramírez-Pérez, José A. Guerrero-Díaz-de-León, Jorge E. Macías‐Díaz, Carlos H. López-Lariz · 2025 · International Journal of Modern Physics C
- When and how to automate image analysis for wildlife monitoring? Guidelines and lessons from a worked example of seabirds in a dynamic coastal environmentClaire A. Carrington, Peter J. Lawrence, Ludmila Ilieva Kuncheva, Francis J. Williams, Samuel L. Hennessey, James J. Waggitt · 2025 · Bird Study
- Additional file 3 of Honeybee communication during collective defence is shaped by predationAndrea López-Incera, Morgane Nouvian, Katja Ried, Thomas Müller, Briegel, Hans J. · 2021 · Figshare
- Additional file 1 of Predicting movement speed of beetles from body size and temperatureJördis F. Terlau, Ulrich Brose, Thomas Boy, Pawar, Samraat, Malin L. Pinsky, Myriam R. Hirt · 2024 · Figshare
- Additional file 1 of Hyperspectral lidar for monitoring high-resolution activity patterns of African stingless bee speciesHampus Månefjord, Andrew Atiogbe Huzortey, Rabbi Boateng, Gbogbo, Y. Adolphe, Assoumou saint-doria Yamoa, Jérémie T. Zoueu, Kwapong, Peter K., Benjamin Anderson, Mikkel S. Brydegaard · 2024 · Figshare
- Additional file 2 of Honeybee communication during collective defence is shaped by predationAndrea López-Incera, Morgane Nouvian, Katja Ried, Thomas Müller, Briegel, Hans J. · 2021 · Figshare
- vassi – verifiable, automated scoring of social interactions in animal groupsPaul Nührenberg, Aneesh P. H. Bose, Alex L. Jordan · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Additional file 1 of Honeybee communication during collective defence is shaped by predationAndrea López-Incera, Morgane Nouvian, Katja Ried, Thomas Müller, Briegel, Hans J. · 2021 · Figshare
- Additional file 2 of Deep learning-based behavioral profiling of rodent stroke recoveryR. Weber, Geertje Mulders, Julia Kaiser, Christian Tackenberg, Ruslan Rust · 2022 · Figshare
- Additional file 1 of When complex movement yields simple dispersal: behavioural heterogeneity, spatial spread and parasitism in groups of micro-waspsVictor Burte, Mélina Cointe, Guy Pérez, Ludovic Mailleret, Vincent Calcagno · 2024 · Figshare
- Additional file 2 of Predicting thresholds for population replacement gene drivesAnna Janzen, Ratnasri Pothula, Adam Sychla, Nathan R. Feltman, Michael J. Smanski · 2024 · Figshare
- Additional file 1 of Deep learning-based behavioral profiling of rodent stroke recoveryR. Weber, Geertje Mulders, Julia Kaiser, Christian Tackenberg, Ruslan Rust · 2022 · Figshare
- Additional file 1 of Predicting thresholds for population replacement gene drivesAnna Janzen, Ratnasri Pothula, Adam Sychla, Nathan R. Feltman, Michael J. Smanski · 2024 · Figshare
- Ethical and Societal Implications of AI in Human-Animal CommunicationChika Lilian Onyagu, Etaoghene Paul Polo · 2026 · Advances in computational intelligence and robotics book series
- Improved monitoring of hares (Lepus spp.) using thermal imaging combined with distance samplingC. Berndt, Petter Kjellander, Göran Spong, Carl‐Gustaf Thulin · 2026 · European Journal of Wildlife Research
- Phénologies, mécanismes et perturbations anthropiques des dynamiques de migration dulçaquicoles des espèces amphidromes : cas des Sicydiinae de La RéunionRaphaël Lagarde · 2018
- Mechanisms and roles of information processing in collective motionLì Jiāng · 2017 · theses.fr (ABES)
- Experimental analysis and modelling of the behavioural interactions underlying the coordination of collective motion and the propagation of information in fish schoolsValentin Lecheval · 2017 · theses.fr (ABES)
- Étude des stratégies de mouvement chez les parasitoïdes du genre Trichogramma : apports des techniques d’analyse d’images automatiquesVictor Burte · 2018
- Cultural evolution of birdsong in the laboratoryLucille Le Maguer · 2019
- Approche théorique et expérimentale du choix de source et de la gestion collective des ressources alimentaires chez la fourmiOlivier Bles · 2019
- From molecules to behavior : network effects of Alzheimer's disease-associated amyloid beta peptides in a Drosophila melanogaster larval circuitAnqi Zhou · 2024 · theses.fr (ABES)
- Analysis of collective phases in fish school models with burst-and-coast swimmingWeijia Wang · 2023
- La cognition des larves de moustique comme indicateur biologique de la qualité des écosystèmes aquatiquesMartin Dessart · 2024
- Group size and the strength of social interactions determine the collective response to perturbation in a model of burst-and-coast swimming fishGuozheng Lin, Ramón Escobedo, Zhangang Han, Clément Sire, Guy Theraulaz A · 2026 · Royal Society Open Science
- A Method for Reconstructing and Modeling Social Interactions in Moving Animal Groups from Trajectory DataRamón Escobedo, Clément Sire, Guy Theraulaz A · 2025 · Springer eBooks
- Semi-automated detection of cleaning interactions using supervised machine learningRaul Oliveira, Nuno C. Garcia, Jose Ricardo Paula · 2026 · Scientific Reports
- Multiobject Tracking for Animal Behavior Measurement on the Chinese Space Station: Motion Decoupling and Progressive Feature FusionZhuang Zhou, Shengyang Li, Yixuan Lv, Kang Liu, Rong Yang, Han Wang · 2026 · IEEE Transactions on Instrumentation and Measurement
- ManuTrace : An HTML ‐Based Interface for Manually Extracting Movement Trajectory Data From a VideoKiyotaka Yabe, Yuna Tosaka, Kenji Matsuura · 2026 · Ecology and Evolution
- The effect of experimenter experience on behavioural measures in zebrafish: Comparison of observation-based and video-tracking methodsKelly Cheung, Selena Gangaram, Michael Pei Xue Ge, Jenny Sung, Kenneth Wong, Liam Howatson, Alison Lai, Steven Li, Benjamin Tsang, Robert T. Gerlai · 2026 · Current Research in Behavioral Sciences
- Using semi-folded arenas to observe spontaneous emergence of collective trails in whole colonies of termitesHelder Hugo, Iain D. Couzin · 2026 · Movement Ecology
- Behavioural phenotyping with small aquatic model organisms: why digital video resolution and bitrate matterHy Do, Florian Kreuder, Xuhui Han, Michael Didham, Savita Kumari, Oskar Wasielewski, Jan Kaslin, Paul A. Ramsland, Antoine Marie Dujon, Donald Włodkowic · 2026 · Behavioural Pharmacology
- Paracetamol Responses Depend on Temperature, Life Stage, and Genetic Background in Drosophila melanogaster Across GenerationsBirk Nete Randlev Gleerup Hundebøl, Jesper Givskov Sørensen · 2026 · Medicines
- Better together: Cross and joint covariances enhance signal detectability in undersampled dataAnonymous, Sean A. Ridout, Ilya M. Nemenman · 2026 · Physical review. E
- A Smart‐Alarm Detection and Deterrent System for Long‐Tailed Macaque Intrusion in Human Residential ZonesKanyanut Homsapaya, Janya Jadejaroen, Orawan Watchanupaporn · 2026 · Journal of Medical Primatology
- Low-latency multicamera 3D tracking of insects with BraidMichael J. M. Harrap, Andrew David Straw · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
- Artificial intelligence in soil ecotoxicology: A critical review and perspective on micro/nanoplastic exposure to earthwormsLi Chen, Fengyu Huang, Naglaa Ibrahim, Tianyi Qiu, Jing Chen, Shuai Ma, Kexiao Song, Qi Li, Changchao Li, Haijian Bing et al. · 2026 · Soil Biology and Biochemistry
- Exploratory Comparison of Behavior and Welfare-Related Indicators in Captive Lions (Panthera leo) Across Three Zoo Enclosures Using Machine-Learning QuantificationFrej Gammelgård, Silje Marquardsen Lund, Jonas Nielsen, Thea Loumand Faddersbøll, Trine Hammer Jensen, Sussie Pagh, Kirstin Anderson Hansen, Flemming Nielsen, Cino Pertoldi · 2026 · Animals
- UAV ‐Based Dolphin Tracking Enables Automated Quantification of Spatial Group Cohesion in Natural and Exposure SettingsFadia Al Abbar, Jasper A.J. Eikelboom, Lorenzo Fiori, Fleur Visser, Anne Grundlehner, Anne Lodder, Blair R. Costelloe, Ramon Hollands, Geert M. Aarts, Frank van Langevelde · 2026 · Marine Mammal Science
- SnifferBox: A Real-Time Event-Driven Olfactory Training Automation Platform for Laboratory RatsGökhan Yenikaya · 2026 · Journal of Research in Veterinary Medicine