The DOI matches its Crossref record; 25 of the 25 references it cites were found in a registry or an index.
Mutational analysis of the structure and function of the xeroderma pigmentosum group A complementing protein. Identification of essential domains for nuclear localization and DNA excision repair.
Open accessAbstract
We showed previously that the xeroderma pigmentosum group A complementing (XPAC) protein involved in the DNA excision repair pathway contains a zinc-finger motif and is localized in the nucleus of normal human cells. For detailed structural and functional analyses of the XPAC protein, we constructed various XPAC cDNAs by site-directed mutagenesis and isolated permanent cell lines expressing mutant proteins. Immunofluorescent analysis of these lines indicated that the nuclear localization signal is located in the region encoded by Exon 1, especially centered at amino acids 30-42. A UV survival study showed that regions from Exons 2 through 6 were essential for DNA repair function, but that Exon 1 was not. Interestingly, deletion of the glutamic acid cluster in the region encoded by Exon 2 resulted in a dramatic loss of DNA repair activity. Furthermore, replacements of each of the 4 cysteines supposed to form a zinc-finger structure in the region encoded by Exon 3 by serine or glycine resulted in similar levels of loss of repair activity. These results suggest that all 4 cysteines forming a zinc-finger structure and also the glutamic acid cluster are important for DNA repair function.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The targeting of XPA to the nucleus occurs via its nuclear localization sequence (NLS) which contains basic residues located at positons 30–34 of the 273 amino acid protein 62, 63, 82, 68.”
From Xeroderma Pigmentosa Group A (XPA), Nucleotide Excision Repair and Regulation by ATR in Response to Ultraviolet Irradiation (2017) · cites this paper as [63]
In the citing paper
“Among these domains, a NLS-like motif -RKRQR-) is located in the N-terminus (residues 30–34) [38]”
From UV-Induced Nuclear Import of XPA Is Mediated by Importin-α4 in An ATR-Dependent Manner (2013) · cites this paper as [38]
In the citing paper
“Formaldehyde rather than methanol was employed in the reports of a nucleus-only location for XPA [38], [51], [52].”
From UV-Induced Nuclear Import of XPA Is Mediated by Importin-α4 in An ATR-Dependent Manner (2013) · cites this paper as [38]
In the citing paper
“reports of immunofluorescence microscopic analyses that showed that XPA was fully localized to the nucleus even in the absence of DNA damage [38], [51], [52].”
From UV-Induced Nuclear Import of XPA Is Mediated by Importin-α4 in An ATR-Dependent Manner (2013) · cites this paper as [38]
Citations
Cites
DNA sequencing with chain-terminating inhibitors
Sanger, F., Nicklen, S., & Coulson, A. R. (1977) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.74.12.5463 · Cited by 68,572
Antibodies, a laboratory manual
(1989) · Biomedicine & Pharmacotherapy · doi:10.1016/0753-3322(89)90130-3 · Cited by 12,318
High-Efficiency Transformation of Mammalian Cells by Plasmid DNA
Chen, C., & Okayama, H. (1987) · Molecular and Cellular Biology · doi:10.1128/mcb.7.8.2745 · Cited by 5,327
Efficient selection for high-expression transfectants with a novel eukaryotic vector
Niwa, H., Yamamura, K., & Miyazaki, J. (1991) · Gene · doi:10.1016/0378-1119(91)90434-d · Cited by 5,149
Self-citationAntibodies: A laboratory manual
J.L. (1989) · Trends in Biochemical Sciences · doi:10.1016/0968-0004(89)90307-1 · Cited by 5,141
Defective repair replication of DNA in xeroderma pigmentosum
CLEAVER, J. E. (1968) · Nature · doi:10.1038/218652a0 · Cited by 1,729
Robbins, J., Dilwortht, S. M., Laskey, R. A., & Dingwall, C. (1991) · Cell · doi:10.1016/0092-8674(91)90245-t · Cited by 1,490
Taylor, W. J., Ott, J., & Eckstein, F. (1985) · Nucleic Acids Research · doi:10.1093/nar/13.24.8765 · Cited by 848
Zinc fingers: Gilt by association
Evans, R. M. (1988) · Cell · doi:10.1016/0092-8674(88)90522-3 · Cited by 788
Garcia-Bustos, J., Heitman, J., & Hall, M. N. (1991) · Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes · doi:10.1016/0304-4157(91)90013-m · Cited by 543
Zinc fingers and other metal-binding domains. Elements for interactions between macromolecules.
Berg, J. M. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)39172-0 · Cited by 502
Weeda, G., van Ham, R. C. A., Vermeulen, W., Bootsma, D., van der Eb, A. J., & Hoeijmakers, J. H. J. (1990) · Cell · doi:10.1016/0092-8674(90)90122-u · Cited by 432
Tanaka, K., Miura, N., Satokata, I., Miyamoto, I., Yoshida, M. C., Satoh, Y., Kondo, S., Yasui, A., Okayama, H., & Okada, Y. (1990) · Nature · doi:10.1038/348073a0 · Cited by 388
Self-citationVanduin, M., DEWIT, J., Odijk, H., Westerveld, A., Yasui, A., Koken, M. H. M., Hoeijmakers, J. H. J., & Bootsma, D. (1986) · Cell · doi:10.1016/0092-8674(86)90014-0 · Cited by 324
Weber, C. A., Salazar, E. P., Stewart, S. A., & Thompson, L. H. (1990) · The EMBO Journal · doi:10.1002/j.1460-2075.1990.tb08260.x · Cited by 262
Robins, P., Jones, C. J., Biggerstaff, M., Lindahl, T. L., & Wood, R. D. (1991) · The EMBO Journal · doi:10.1002/j.1460-2075.1991.tb04961.x · Cited by 201
Anionic regions in nuclear proteins.
Earnshaw, W. C. (1987) · The Journal of Cell Biology · doi:10.1083/jcb.105.4.1479 · Cited by 165
Tanaka, K., Satokata, I., Ogita, Z., Uchida, T., & Okada, Y. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.14.5512 · Cited by 134
Self-citationCharacterization of a splicing mutation in group A xeroderma pigmentosum.
Satokata, I., Tanaka, K., Miura, N., Miyamoto, I., Satoh, Y., Kondo, S., & Okada, Y. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.24.9908 · Cited by 124
Self-citationMolecular cloning of the human DNA excision repair gene ERCC-6.
Troelstra, C., Odijk, H., de Wit, J., Westerveld, A., Thompson, L. H., Bootsma, D., & Hoeijmakers, J. H. J. (1990) · Molecular and Cellular Biology · doi:10.1128/mcb.10.11.5806 · Cited by 120
Three nonsense mutations responsible for group A xeroderma pigmentosum
Satokata, I., Tanaka, K., Miura, N., Narita, M., Mimaki, T., Satoh, Y., Kondo, S., & Okada, Y. (1992) · Mutation Research/DNA Repair · doi:10.1016/0921-8777(92)90080-m · Cited by 87
Self-citationIsolation of the functional human excision repair gene ERCC5 by intercosmid recombination
Mudgett, J. S., & Maclnnes, M. A. (1990) · Genomics · doi:10.1016/0888-7543(90)90248-s · Cited by 75
Navaratnam, S., Myles, G. M., Strange, R. W., & Sancar, A. (1989) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)71588-3 · Cited by 70
Miura, N., Miyamoto, I., Asahina, H., Satokata, I., Tanaka, K., & Okada, Y. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)55060-2 · Cited by 50
Self-citationShimamoto, T., Kohno, K., Tanaka, K., & Okada, Y. (1991) · Biochemical and Biophysical Research Communications · doi:10.1016/0006-291x(91)92070-z · Cited by 31
Self-citation
Research works printed but not linked: 4
- Hoeijmakers, 1990, Cancer Cells (Cold Spring Harbor), 2, 311
- Troelstra, 1990, Mol. Cell. Biol., 10, 5806
- Satokata, 1992, Hum. Genet.
- Chen, 1987, Mol. Cell. Biol., 7, 2745
Cited by
Sorted by citations
Flexible nets: The roles of intrinsic disorder in protein interaction networks
Dunker, A. K., Cortese, M. S., Romero, P., Iakoucheva, L. M., & Uversky, V. N. (2005) · The FEBS Journal · doi:10.1111/j.1742-4658.2005.04948.x · Cited by 1,122
Bertin, G., & Averbeck, D. (2006) · Biochimie · doi:10.1016/j.biochi.2006.10.001 · Cited by 934
Dabholkar, M., Vionnet, J. A., Bostick-Bruton, F., Yu, J. J., & Reed, E. (1994) · Journal of Clinical Investigation · doi:10.1172/jci117388 · Cited by 446
Protein Design: Toward Functional Metalloenzymes
Yu, F., Cangelosi, V. M., Zastrow, M. L., Tegoni, M., Plegaria, J. S., Tebo, A. G., Mocny, C. S., Ruckthong, L., Qayyum, H., & Pecoraro, V. L. (2014) · Chemical Reviews · doi:10.1021/cr400458x · Cited by 449
Preferential binding of the xeroderma pigmentosum group A complementing protein to damaged DNA
Jones, C. J., & Wood, R. D. (1993) · Biochemistry · doi:10.1021/bi00096a021 · Cited by 291
Metadata
- Authors
- Miyamoto, I., Miura, N., Niwa, H., Miyazaki, J., & Tanaka, K.
- Affiliations
- Hyogo Medical University (JP)
- ORCID
- Venue
- Journal of Biological Chemistry
- Publisher
- Elsevier BV
- Published
- 1992-06
- Volume
- 267
- Issue
- 17
- Pages
- 12182-12187
- ISSN
- 0021-9258 (ISSN-L)
- OpenAlex
- W2127547755
- Cited by
- 122
- References
- 25
- Citations by year
- 2026: 1 · 2023: 1 · 2022: 2 · 2021: 1 · 2020: 1 · 2018: 1 · 2017: 4 · 2016: 4 · 2015: 1 · 2014: 2 · 2013: 4 · 2012: 1
- FWCI
- 2.91
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Biological Chemistry (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Nuclear Structure and Function
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Enzyme Structure and Function
- Keywords
- excision repair, nucleotide excision repair, zinc finger, nuclear localization signal, cysteine residues, site-directed mutagenesis, UV-induced DNA damage, protein structure-function relationship
- MeSH terms
- Amino Acid Sequence, Base Sequence, Cell Line, Cell Nucleus, DNA, DNA Repair, DNA-Binding Proteins, Escherichia coli, Fluorescent Antibody Technique, Humans, Molecular Sequence Data, Recombinant Proteins, Structure-Activity Relationship, Transfection, Xeroderma Pigmentosum, Mutagenesis, Site-Directed, Zinc Fingers, Xeroderma Pigmentosum Group A Protein
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review