The DOI matches its Crossref record; 49 of the 49 references it cites were found in a registry or an index.
The E. coli signal recognition particle is required for the insertion of a subset of inner membrane proteins.
Open accessAbstract
E. coli homologs of the signal recognition particle (SRP) and its receptor are essential for viability, but their role in protein export is unclear. To elucidate their function, we devised a genome-wide screen to identify genes that encode SRP substrates. Inhibition of the SRP pathway sharply blocked the membrane insertion of several polytopic inner membrane proteins (IMPs) that were predicted to be SRP substrates, but had a smaller effect on the insertion of other IMPs and no significant effect on preprotein translocation. Our results suggest that whereas most E. coli preproteins and some IMPs can utilize SRP-independent targeting pathways effectively, the structural features of a subset of IMPs have required the conservation of an SRP-based targeting machinery.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The SRP pathway is a universally conserved targeting system that bacteria primarily use for inner membrane proteins”
From The Dynamic SecYEG Translocon (2021) · cites this paper as Ulbrandt et al., 1997
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
Antibodies, a laboratory manual
(1989) · Biomedicine & Pharmacotherapy · doi:10.1016/0753-3322(89)90130-3 · Cited by 12,318
A short course in bacterial genetics
Miller, J. H. (1992) · Cited by 4,391
The GTPase superfamily: conserved structure and molecular mechanism
Bourne, H. R., Sanders, D. A., & McCormick, F. (1991) · Nature · doi:10.1038/349117a0 · Cited by 3,392
Kohara, Y., Akiyama, K., & Isono, K. (1987) · Cell · doi:10.1016/0092-8674(87)90503-4 · Cited by 1,754
Shizuya, H., Birren, B. W., Kim, U. J., Mancino, V., Slepak, T. I., Tachiiri, Y., & Simon, M. I. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.18.8794 · Cited by 1,672
Escherichia coli and Salmonella.
Neidhart, F. C. (1996) · Cited by 1,577
Deshaies, R., Koch, B., Werner-Washburne, M., Craig, E., & Schekman, R. (1988) · Nature · doi:10.1038/332800a0 · Cited by 1,368
70K heat shock related proteins stimulate protein translocation into microsomes
Chirico, W. J., Waters, M. G., & Blobel, G. (1988) · Nature · doi:10.1038/332805a0 · Cited by 1,232
Common Principles of Protein Translocation Across Membranes
Schatz, G., & Dobberstein, B. (1996) · Science · doi:10.1126/science.271.5255.1519 · Cited by 1,116
TopPred II: an improved software for membrane protein structure predictions
Claros, M. G., & von HEIJNE, G. (1994) · Computer applications in the biosciences · doi:10.1093/bioinformatics/10.6.685 · Cited by 939
Signal Sequence Recognition and Protein Targeting to the Endoplasmic Reticulum Membrane
Walter, P., & Johnson, A. E. (1994) · Annual Review of Cell Biology · doi:10.1146/annurev.cb.10.110194.000511 · Cited by 822
A Genetic Approach to Analyzing Membrane Protein Topology
Manoil, C., & Beckwith, J. (1986) · Science · doi:10.1126/science.3529391 · Cited by 605
Bernstein, H. D., Poritz, M. A., Strub, K., Hoben, P. J., Brenner, S., & Walter, P. (1989) · Nature · doi:10.1038/340482a0 · Cited by 467
Self-citationRömisch, K., Webb, J. R., Herz, J., Prehn, S., Frank, R. W., Vingron, M., & Dobberstein, B. (1989) · Nature · doi:10.1038/340478a0 · Cited by 346
Oliver, D. B., Cabelli, R. J., Dolan, K. M., & Jarosik, G. P. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.21.8227 · Cited by 311
The signal recognition particle in S. cerevisiae
Hann, B. C., & Walter, P. (1991) · Cell · doi:10.1016/0092-8674(91)90577-l · Cited by 298
Determinants of membrane protein topology.
Boyd, D. H., Manoil, C., & Beckwith, J. (1987) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.84.23.8525 · Cited by 293
Connolly, T., & Gilmore, R. (1989) · Cell · doi:10.1016/0092-8674(89)90129-3 · Cited by 290
An E. coli Ribonucleoprotein Containing 4.5 S RNA Resembles Mammalian Signal Recognition Particle
Poritz, M. A., Bernstein, H. D., Strub, K., Zopf, D., Wilhelm, H., & Walter, P. (1990) · Science · doi:10.1126/science.1701272 · Cited by 284
Self-citationValent, Q. A., Kendall, D. A., High, S., Kusters, R., Oudega, B., & Luirink, J. (1995) · The EMBO Journal · doi:10.1002/j.1460-2075.1995.tb00236.x · Cited by 280
The E. coli ffh gene is necessary for viability and efficient protein export
Phillips, G. J., & Silhavy, T. J. (1992) · Nature · doi:10.1038/359744a0 · Cited by 269
Evidence for specificity at an early step in protein export in Escherichia coli
Kumamoto, C. A., & Beckwith, J. (1985) · Journal of Bacteriology · doi:10.1128/jb.163.1.267-274.1985 · Cited by 266
Effects of mutations in heat‐shock genes groES and groEL on protein export in Escherichia coli.
Kusukawa, N., Yura, T., Ueguchi, C., Akiyama, Y., & Ito, K. (1989) · The EMBO Journal · doi:10.1002/j.1460-2075.1989.tb08517.x · Cited by 254
An alternative protein targeting pathway in Escherichia coli: studies on the role of FtsY.
Luirink, J., ten Hagen‐Jongman, C. M., van der Weijden, C. C., Oudega, B., High, S., Dobberstein, B., & Kusters, R. (1994) · The EMBO Journal · doi:10.1002/j.1460-2075.1994.tb06511.x · Cited by 249
Manoil, C. (1991) · Methods in cell biology · doi:10.1016/s0091-679x(08)61676-3 · Cited by 232
Miller, J. D., Bernstein, H. D., & Walter, P. (1994) · Nature · doi:10.1038/367657a0 · Cited by 222
Self-citationA signal sequence is not required for protein export in prlA mutants of Escherichia coli.
Derman, A. I., Puziss, J. W., Bassford, P. J., & Beckwith, J. (1993) · The EMBO Journal · doi:10.1002/j.1460-2075.1993.tb05728.x · Cited by 218
Ribes, V., Römisch, K., Giner, A., Dobberstein, B., & Tollervey, D. W. (1990) · Cell · doi:10.1016/0092-8674(90)90454-m · Cited by 209
Reciprocal stimulation of GTP hydrolysis by two directly interacting GTPases
Powers, T., & Walter, P. (1995) · Science · doi:10.1126/science.7660124 · Cited by 203
Signal-sequence recognition by an Escherichia coli ribonucleoprotein complex
Luirink, J., High, S., Wood, H. E., Giner, A., Tollervey, D. W., & Dobberstein, B. (1992) · Nature · doi:10.1038/359741a0 · Cited by 184
Human SRP RNA and E. coli 4.5S RNA contain a highly homologous structural domain
Poritz, M. A., Strub, K., & Walter, P. (1988) · Cell · doi:10.1016/0092-8674(88)90003-7 · Cited by 178
Establishing Genetic Interactions by a Synthetic Dosage Lethality Phenotype
Kroll, E. S., Hyland, K. M., Hieter, P., & Li, J. J. (1996) · Genetics · doi:10.1093/genetics/143.1.95 · Cited by 162
Inouye, H., Michaelis, S., Wright, A., & Beckwith, J. (1981) · Journal of Bacteriology · doi:10.1128/jb.146.2.668-675.1981 · Cited by 126
The 4.5 S RNA gene of Escherichia coli is essential for cell growth
Brown, S., & Fournier, M. J. (1984) · Journal of Molecular Biology · doi:10.1016/0022-2836(84)90237-7 · Cited by 124
Miller, J. D., Tajima, S., Lauffer, L., & Walter, P. (1995) · The Journal of Cell Biology · doi:10.1083/jcb.128.3.273 · Cited by 118
Bernstein, H. D., Zopf, D., Freymann, D. M., & Walter, P. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.11.5229 · Cited by 115
Self-citationUbiquitin‐assisted dissection of protein transport across membranes.
Johnsson, N., & Varshavsky, A. J. (1994) · The EMBO Journal · doi:10.1002/j.1460-2075.1994.tb06559.x · Cited by 113
Mutations in the gene for EF-G reduce the requirement for 4.5S RNA in the growth of E. coli
Brown, S. (1987) · Cell · doi:10.1016/0092-8674(87)90620-9 · Cited by 83
Molecular cloning and sequencing of the gene for CDP-diglyceride hydrolase of Escherichia coli.
Icho, T., Bulawa, C., & Raetz, C. R. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)38990-1 · Cited by 83
Rapiejko, P. J., & Gilmore, R. (1992) · The Journal of Cell Biology · doi:10.1083/jcb.117.3.493 · Cited by 83
Sugiyama, J. E., Mahmoodian, S., & Jacobson, G. R. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.21.9603 · Cited by 80
A bacteriophage lambda vector for cloning with BamHI and Sau3A
Mizusawa, S., & Ward, D. F. (1982) · Gene · doi:10.1016/0378-1119(82)90200-1 · Cited by 80
Marsh, J., & Goode, J. A. (1993) · Medical Entomology and Zoology · Cited by 75
Struck, J., Toschka, H. Y., Specht, T., & Erdmann, V. A. (1988) · Nucleic Acids Research · doi:10.1093/nar/16.15.7740 · Cited by 68
Molecular cloning and sequencing of the gene for CDP-diglyceride synthetase of Escherichia coli.
Icho, T., Sparrow, C. P., & Raetz, C. R. (1985) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)38988-3 · Cited by 57
Izard, J. W., Rusch, S. L., & Kendall, D. A. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.35.21579 · Cited by 49
The dynamics of assembly of a cytoplasmic membrane protein in Escherichia coli.
Traxler, B. A., Lee, C. A., Boyd, D. H., & Beckwith, J. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)42771-8 · Cited by 36
Membrane topology model of Escherichia coli alpha-ketoglutarate permease by phoA fusion analysis
Seol, W., & Shatkin, A. J. (1993) · Journal of Bacteriology · doi:10.1128/jb.175.2.565-567.1993 · Cited by 32
Research works printed but not linked: 1
- Claros, 1994, TopPred II, Comput. Appl. Biosci., 10, 685
Cited by
Sorted by citations
Navarre, W. W., & Schneewind, O. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.1.174-229.1999 · Cited by 1,391
Oxidative stress, protein damage and repair in bacteria
Ezraty, B., Gennaris, A., Barras, F., & Collet, J. (2017) · Nature Reviews Microbiology · doi:10.1038/nrmicro.2017.26 · Cited by 1,042
Type V Protein Secretion Pathway: the Autotransporter Story
Henderson, I. R., Navarro‐García, F., Desvaux, M., Fernandez, R. C., & Ala’Aldeen, D. A. A. (2004) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.68.4.692-744.2004 · Cited by 873
Tjalsma, H., Bolhuis, A., Jongbloed, J. D. H., Bron, S., & van Dijl, J. M. (2000) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.64.3.515-547.2000 · Cited by 806
The Signal Recognition Particle
Keenan, R. J., Freymann, D. M., Stroud, R. M., & Walter, P. (2001) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.70.1.755 · Cited by 639
Metadata
- Authors
- Ulbrandt, N. D., Newitt, J. A., & Bernstein, H. D.
- Affiliations
- National Institutes of Health (US)
- Corresponding author
- Newitt, John A
- Bernstein, Harris D
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 1997-01
- Volume
- 88
- Issue
- 2
- Pages
- 187-196
- ISSN
- 0092-8674 (ISSN-L)
- OpenAlex
- W2000023769
- Cited by
- 332
- References
- 49
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 1 · 2023: 1 · 2022: 4 · 2021: 7 · 2020: 4 · 2019: 6 · 2018: 5 · 2017: 9 · 2016: 7 · 2015: 2 · 2014: 8 · 2013: 13 · 2012: 9
- FWCI
- 19.14
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA and protein synthesis mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Keywords
- signal recognition particle, SRP receptor, polytopic membrane proteins, protein targeting, genome-wide screen, preprotein translocation, Escherichia coli
- MeSH terms
- Bacterial Proteins, Biological Transport, Escherichia coli, Genes, Bacterial, Membrane Proteins, Phenotype, Protein Precursors, Recombinant Fusion Proteins, Transformation, Bacterial, Mutagenesis, Site-Directed, Receptors, Cytoplasmic and Nuclear, Signal Recognition Particle, Escherichia coli Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review